FFCP PHASE1:Hg19::chrX:110924510..110924524,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30881 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENST00000468657,ENST00000471924_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_4_at_ALG13_5end | |||
|id=chrX:110924510..110924524,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.98e-30!140;CL:0002031!1.13e-25!124;CL:0002087!5.52e-25!119;CL:0000037!1.02e-23!172;CL:0000566!1.02e-23!172;CL:0000860!1.11e-23!45;CL:0002057!1.35e-22!42;CL:0000988!3.68e-22!182;CL:0002032!1.54e-20!165;CL:0000837!1.54e-20!165;CL:0000766!5.16e-15!76;CL:0000557!1.17e-14!71;CL:0000839!9.27e-13!70;CL:0000838!2.33e-12!52;CL:0002009!3.27e-12!65;CL:0000542!3.71e-12!53;CL:0000051!3.71e-12!53;CL:0002194!1.63e-11!63;CL:0000576!1.63e-11!63;CL:0000040!1.63e-11!63;CL:0000559!1.63e-11!63;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112;CL:0000791!6.61e-09!18;CL:0000789!6.61e-09!18;CL:0002420!6.61e-09!18;CL:0002419!6.61e-09!18;CL:0000790!6.61e-09!18;CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0000236!2.62e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.09e-30;33!CL:0002057;4.09e-30;33!CL:0000576;1.10e-21;48!CL:0000473;5.31e-20;39!CL:0000234;5.31e-20;39!CL:0000766;2.76e-18;69!CL:0002087;4.33e-15;104!CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000738;1.88e-11;136!CL:0000624;3.35e-10;6!CL:0000542;1.27e-08;53!CL:0000084;1.66e-08;25!CL:0002393;4.14e-08;6!CL:0002397;4.14e-08;6!CL:0000236;7.38e-08;13!CL:0000763;4.98e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.40e-53,136;CL:0002031,1.13e-44,120;CL:0002087,3.16e-44,115;CL:0000860,3.58e-44,42;CL:0002057,3.58e-44,42;CL:0000037,6.71e-41,168;CL:0000988,1.74e-38,177;CL:0000766,3.59e-37,72;CL:0000473,7.29e-37,48;CL:0000234,7.29e-37,48;CL:0002032,1.40e-35,161;CL:0000837,1.40e-35,161;CL:0000557,6.93e-34,67;CL:0000839,5.51e-31,66;CL:0002009,6.58e-29,61;CL:0002194,1.58e-28,59;CL:0000576,1.58e-28,59;CL:0000040,1.58e-28,59;CL:0000559,1.58e-28,59;CL:0000763,1.22e-21,108;CL:0000049,1.22e-21,108;CL:0000838,3.04e-13,52;CL:0000542,7.78e-13,53;CL:0000051,7.78e-13,53;CL:0000791,1.41e-11,18;CL:0000789,1.41e-11,18;CL:0002420,1.41e-11,18;CL:0002419,1.41e-11,18;CL:0000790,1.41e-11,18;CL:0002393,2.75e-11,9;CL:0002397,2.75e-11,9;CL:0000624,3.45e-10,6;CL:0000134,5.28e-09,354;CL:0000236,1.53e-08,14;CL:0002320,2.09e-08,361;CL:0000084,2.39e-08,25;CL:0000827,2.39e-08,25;CL:0000219,6.55e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.05e-31;42!CL:0000790;1.08e-11;18!CL:0000051;1.27e-08;53 | |||
|ontology_enrichment_disease=DOID:0050687!3.43e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.93e-14!86;UBERON:0002371!5.55e-13!80;UBERON:0002390!3.91e-11!102;UBERON:0003061!3.91e-11!102;UBERON:0004765!2.56e-10!101;UBERON:0001434!2.56e-10!101;UBERON:0002193!2.98e-08!112;UBERON:0002405!9.74e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-29,76;UBERON:0001474,1.15e-28,82;UBERON:0002390,4.83e-26,98;UBERON:0003061,4.83e-26,98;UBERON:0004765,1.07e-24,90;UBERON:0002405,9.06e-23,93;UBERON:0002193,4.47e-22,108;UBERON:0001434,1.14e-20,100;UBERON:0002384,8.94e-09,371;UBERON:0002204,2.31e-07,167 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,9.4407426443737,7.67658796194425,6.34746105595912,0,0,0.369754010166788,0.852139206383318,0.853015394924529,2.93600439334847,8.86392653651004,4.8130667392834,9.54847831149748,0,0,0.257575567634187,1.30858414901608,2.26725566213286,0.485168122375632,3.0215774797739,4.93401465626191,1.54853185447552,2.8769239232215,1.0246428261164,2.60130452877444,2.75796544589295,4.51839278508678,2.70852973188684,2.07066573496865,1.36453075028923,1.79778787556068,4.59125838556354,4.49300637906531,3.19668562899521,1.9791078011203,1.79517291859469,1.27867425159808,2.90209238628584,3.97169657283798,3.11411124497787,2.00998932205395,5.21482918420201,4.34377689410233,1.81619850790011,3.31449872388808,3.48108626184973,1.69004229049553,1.70083439972035,2.72556239160889,2.92054440980887,1.80212271409808,1.92870704036496,2.28010194992999,1.79025009479181,1.82664153764634,3.51992488922645,2.18455444504853,0.889509253863555,0.853460445133014,2.00197993518006,3.4485146397269,0.661044872784862,2.86216126360609,37.5680559612236,50.5023982859007,44.7259676906518,2.64342657158052,12.3311883855938,1.05353633910031,22.8183333332046,16.1134412727158,29.1954128579303,0.83593247695339,33.5699934632598,38.8227200702481,37.0170783975031,1.33692548262208,21.2116253381883,14.1781692533518,14.6234086433108,0.512365278902701,1.30059347559878,0.328875809207352,1.93445012450094,0.869409257205157,33.6610498377877,35.3153893078421,31.360657141493,0.453237370790265,34.4898444241729,45.0151953582245,24.5429101258918,0.95569624297229,1.30216690771284,0.950452044448374,1.20460095262218,0.255973222308837,1.24930726552346,0.710331756132051,2.46338399076314,32.8618991456314,20.3254548795466,30.4131248153878,0,0,0.383587685530591,0,0,0.144846518960824,0,0.973269740605272,0,0.221729397462564,0.351339142772504,0.654895377488563,0,0,0,0,0,6.67773748054957,4.0039643754609,1.85728750664782,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0.496971951695318,0.506522046658319,0.926864265692532,0.573673241497627,0,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,0.89694817844431,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,1.35021065793013,0.0974370051611986,0.757301322732344,0,0,1.06502877754984,0,0,0.193260853163297,0,0,1.21973706129595,0.530119073285941,1.85910308591229,1.55491582523056,2.77552935963191,1.09493207722749,0,0,0,0,0,0.828147600278907,0.337169380156203,0.964044119533928,1.21323370005633,0.435758888184812,1.42362371466658,0.539325232640658,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0,8.86793828212698,0.264145302039678,9.74442143041629,4.61183850934277,10.2256371075368,0.571481048629521,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,0.112085143993527,23.2496297038274,25.8753089831421,26.0536363647889,0,0,0,0.502548796003046,0.637938751653163,0,0,1.24324654030811,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,10.3384013061444,12.7271378482984,8.00456683525833,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.640986253728404,0.577566499444116,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0.340906509664404,0.356128142586949,0.165284915360978,0.384380134730212,1.65896526242959,0.6069466851333,0.464845549297286,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,1.239293992399,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.534120355637366,0,1.71528151186722,0.185803175125719,0.28853842595289,1.06712765022621,0.318852545457645,0,0.383010740264733,0,0.324621940274555,0.842391534340376,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0.835218521685727,0,0,0.66614393599564,0,0.7485621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| |||
|short_description=p4@ALG13 | |||
}} |
Revision as of 06:38, 23 January 2014
Short description: | p4@ALG13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALG13_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 46bp_to_ENST00000468657, ENST00000471924_5end |
EntrezGene: | ALG13 |
HGNC: | 30881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-29 | 76 |
bone element | 1.15e-28 | 82 |
hematopoietic system | 4.83e-26 | 98 |
blood island | 4.83e-26 | 98 |
skeletal element | 1.07e-24 | 90 |
immune system | 9.06e-23 | 93 |
hemolymphoid system | 4.47e-22 | 108 |
skeletal system | 1.14e-20 | 100 |
connective tissue | 8.94e-09 | 371 |
musculoskeletal system | 2.31e-07 | 167 |