FFCP PHASE1:Hg19::chrX:107288280..107288317,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=340547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28675 | |||
|TSSclassifier=strong | |||
|UniProt=C9JY48 | |||
|association_with_transcript=0bp_to_ENST00000458383_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_1_at_VSIG1_5end | |||
|id=chrX:107288280..107288317,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.36e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!2.64e-12!2;UBERON:0007023!5.46e-09!115;UBERON:0001007!7.51e-09!155;UBERON:0001555!7.51e-09!155;UBERON:0007026!7.51e-09!155;UBERON:0004921!8.35e-09!129;UBERON:0004185!8.35e-09!129;UBERON:0005153!2.73e-08!37;UBERON:0004119!8.44e-08!169;UBERON:0000925!8.44e-08!169;UBERON:0006595!8.44e-08!169;UBERON:0002336!4.78e-07!1;UBERON:0001018!4.78e-07!1;UBERON:0002473!4.78e-07!1;UBERON:0005340!4.78e-07!1;UBERON:0002316!4.78e-07!1;UBERON:0003544!4.78e-07!1;UBERON:0001020!4.78e-07!1;UBERON:0005970!4.78e-07!1;UBERON:0002437!4.78e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.41e-14;1!UBERON:0011215;2.41e-14;1!UBERON:0001018;2.41e-14;1!UBERON:0002473;2.41e-14;1!UBERON:0005340;2.41e-14;1!UBERON:0003544;2.41e-14;1!UBERON:0005970;2.41e-14;1!UBERON:0002316;2.41e-14;1!UBERON:0001020;2.41e-14;1!UBERON:0002437;2.41e-14;1!UBERON:0000945;8.78e-12;5!UBERON:0010039;8.78e-12;5!UBERON:0005409;1.51e-09;22!UBERON:0001255;8.04e-08;2!UBERON:0005162;8.04e-08;2!UBERON:0000122;8.04e-08;2!UBERON:0001556;8.04e-08;2!UBERON:0000473;9.71e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,3.15e-14,1;UBERON:0011215,3.15e-14,1;UBERON:0001018,3.15e-14,1;UBERON:0002473,3.15e-14,1;UBERON:0005340,3.15e-14,1;UBERON:0003544,3.15e-14,1;UBERON:0005970,3.15e-14,1;UBERON:0002316,3.15e-14,1;UBERON:0001020,3.15e-14,1;UBERON:0002437,3.15e-14,1;UBERON:0005409,1.84e-08,25;UBERON:0001255,8.04e-08,2;UBERON:0001556,8.04e-08,2;UBERON:0005162,9.19e-08,2;UBERON:0000122,9.19e-08,2;UBERON:0000473,9.71e-08,8;UBERON:0000945,1.07e-07,8;UBERON:0010039,1.07e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.9964506307841,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,1.01101699471016,0,0,0,0,0,0,14.5188859258397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,33.0852141845996,0,18.0113021442632,0,4.11827994868715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.34827528574,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0,0,0,0,0.118193840883968,0,1.96232732126285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,262.921099768746,0,0,0,0,0,17.4578857370082,0,0,0,0,0,0,0,0,0,0,120.336572770564,109.865293364033,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@VSIG1 | |||
}} |
Revision as of 06:33, 23 January 2014
Short description: | p1@VSIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_VSIG1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_ENST00000458383_5end |
EntrezGene: | VSIG1 |
HGNC: | 28675 |
UniProt: | C9JY48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 3.15e-14 | 1 |
central nervous system cell part cluster | 3.15e-14 | 1 |
axon tract | 3.15e-14 | 1 |
intercerebral commissure | 3.15e-14 | 1 |
dorsal telencephalic commissure | 3.15e-14 | 1 |
brain white matter | 3.15e-14 | 1 |
brain commissure | 3.15e-14 | 1 |
white matter | 3.15e-14 | 1 |
nervous system commissure | 3.15e-14 | 1 |
cerebral hemisphere white matter | 3.15e-14 | 1 |
gastrointestinal system | 1.84e-08 | 25 |
urinary bladder | 8.04e-08 | 2 |
lower urinary tract | 8.04e-08 | 2 |
multi cell component structure | 9.19e-08 | 2 |
neuron projection bundle | 9.19e-08 | 2 |
testis | 9.71e-08 | 8 |
stomach | 1.07e-07 | 8 |
food storage organ | 1.07e-07 | 8 |