FFCP PHASE1:Hg19::chrX:73043300..73043312,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12810 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-146bp_to_AK054860_5end | |||
|description=CAGE_peak_35_at_XIST_5end | |||
|id=chrX:73043300..73043312,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.83e-14!57;UBERON:0005068!3.83e-14!57;UBERON:0006241!3.83e-14!57;UBERON:0007135!3.83e-14!57;UBERON:0002616!3.78e-13!59;UBERON:0002780!8.55e-13!41;UBERON:0001890!8.55e-13!41;UBERON:0006240!8.55e-13!41;UBERON:0003080!2.56e-12!42;UBERON:0002346!3.26e-11!90;UBERON:0002020!5.84e-11!34;UBERON:0003528!5.84e-11!34;UBERON:0003075!8.39e-11!86;UBERON:0007284!8.39e-11!86;UBERON:0005743!1.02e-10!86;UBERON:0000955!2.33e-10!69;UBERON:0006238!2.33e-10!69;UBERON:0001017!2.77e-10!82;UBERON:0000073!3.64e-10!94;UBERON:0001016!3.64e-10!94;UBERON:0002791!5.14e-10!33;UBERON:0003056!5.26e-10!61;UBERON:0001893!1.45e-09!34;UBERON:0001869!3.23e-08!32;UBERON:0000153!1.35e-07!129;UBERON:0007811!1.35e-07!129;UBERON:0000033!1.79e-07!123;UBERON:0000924!4.57e-07!173;UBERON:0006601!4.57e-07!173;UBERON:0002619!5.57e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;7.66e-10;32!UBERON:0001950;1.93e-09;20!UBERON:0002038;2.54e-09;1!UBERON:0009661;2.54e-09;1!UBERON:0002950;2.54e-09;1!UBERON:0001891;2.54e-09;1!UBERON:0001893;4.62e-09;34!UBERON:0000073;5.97e-09;53!UBERON:0002616;5.97e-09;53!UBERON:0003528;8.43e-09;34!UBERON:0002020;8.43e-09;34!UBERON:0002619;1.33e-08;22!UBERON:0002780;2.06e-08;41!UBERON:0001890;2.06e-08;41!UBERON:0000956;1.38e-07;25!UBERON:0000203;1.38e-07;25!UBERON:0001869;1.39e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.34e-11,41;UBERON:0001890,3.34e-11,41;UBERON:0003080,3.34e-11,41;UBERON:0006240,3.34e-11,41;UBERON:0002791,3.88e-11,32;UBERON:0000073,9.69e-11,53;UBERON:0002616,9.69e-11,53;UBERON:0003528,1.86e-10,34;UBERON:0002020,1.86e-10,34;UBERON:0001893,1.86e-10,34;UBERON:0001049,4.19e-10,56;UBERON:0005068,4.19e-10,56;UBERON:0006241,4.19e-10,56;UBERON:0007135,4.19e-10,56;UBERON:0001950,1.66e-09,20;UBERON:0002038,4.15e-09,1;UBERON:0009661,4.15e-09,1;UBERON:0002950,4.15e-09,1;UBERON:0001891,4.15e-09,1;UBERON:0009616,4.15e-09,1;UBERON:0010286,4.15e-09,1;UBERON:0002619,1.16e-08,22;UBERON:0001869,2.49e-08,32;UBERON:0000955,5.57e-08,68;UBERON:0006238,5.57e-08,68;UBERON:0000956,1.22e-07,25;UBERON:0000203,1.22e-07,25;UBERON:0003056,3.03e-07,61 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0.581592955118259,0.755751887377619,0,0.464858073811369,0.411167888021826,0,1.43846196161075,0,0,0.344745680736619,1.29096936716765,0,0.564727018627814,0.818718450173537,0,0,0,0,0.659702600373432,0.398927315243264,0,1.16083695451434,1.70215567407342,0,0.75374599577023,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.358779271377724,0.640672166455702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.18157981336281,0,0,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0.414656231081544,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0,0.358121926479791,0.336255431980582,0,0,0,0.254094624222463,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0,0,0.462629081407967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.495056999523528,0,0,0,0.48335359146061,0.308097234229289,0,0,0,0.580066775656914,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,1.51159648712566,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.20596438625408,1.52581736317083,0.884634079449797,0,0,0,0,0.153900517007594,0.91153644677601,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.53036380815245,0.126373159256976,1.50323419414493,3.21433393331466,0,0.330991955875499,0,0,0,0.832048038078832,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,1.17330829640882,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0.129282956361551,0.92562821219883,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,1.77213635993397,1.09823638411767,0.625954653532499,0,0.443716206147409,0,0,0,0.151649117541648,0,0.235265819698172,0,0.724605143054126,0.597019211547496,0.233713309847224,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0,0.322231671127465,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0.194860308839388,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0.318004350653419,0,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,1.43670473151436,0,0,0,0.484426936895553,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,2.18789923607288,0,0,0.175871244359621,0,0.535701835878287,0.672567444437648,1.82089681270989,0.455324382702595,0,0.576169937778896,0.342976018874837,0.0679697329768317,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,1.14671666521161,0,0.0679914901909147,1.30905207102113,0,0,0,0,0.126166424835079,0,0.380095503034311,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | |||
|short_description=p35@XIST | |||
}} |
Revision as of 06:05, 23 January 2014
Short description: | p35@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_35_at_XIST_5end |
Coexpression cluster: | NA |
Association with transcript: | -146bp_to_AK054860_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.34e-11 | 41 |
forebrain | 3.34e-11 | 41 |
anterior neural tube | 3.34e-11 | 41 |
future forebrain | 3.34e-11 | 41 |
regional part of telencephalon | 3.88e-11 | 32 |
regional part of nervous system | 9.69e-11 | 53 |
regional part of brain | 9.69e-11 | 53 |
brain grey matter | 1.86e-10 | 34 |
gray matter | 1.86e-10 | 34 |
telencephalon | 1.86e-10 | 34 |
neural tube | 4.19e-10 | 56 |
neural rod | 4.19e-10 | 56 |
future spinal cord | 4.19e-10 | 56 |
neural keel | 4.19e-10 | 56 |
neocortex | 1.66e-09 | 20 |
substantia nigra | 4.15e-09 | 1 |
midbrain nucleus | 4.15e-09 | 1 |
regional part of midbrain | 4.15e-09 | 1 |
midbrain | 4.15e-09 | 1 |
presumptive midbrain | 4.15e-09 | 1 |
midbrain neural tube | 4.15e-09 | 1 |
regional part of cerebral cortex | 1.16e-08 | 22 |
cerebral hemisphere | 2.49e-08 | 32 |
brain | 5.57e-08 | 68 |
future brain | 5.57e-08 | 68 |
cerebral cortex | 1.22e-07 | 25 |
pallium | 1.22e-07 | 25 |
pre-chordal neural plate | 3.03e-07 | 61 |