FFCP PHASE1:Hg19::chrX:48911040..48911055,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28910 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_uc010nik.2_5end | |||
|description=CAGE_peak_4_at_CCDC120_5end | |||
|id=chrX:48911040..48911055,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.54e-12!57;UBERON:0005068!6.54e-12!57;UBERON:0006241!6.54e-12!57;UBERON:0007135!6.54e-12!57;UBERON:0002346!7.62e-11!90;UBERON:0003075!1.66e-10!86;UBERON:0007284!1.66e-10!86;UBERON:0002616!2.51e-10!59;UBERON:0003080!7.98e-10!42;UBERON:0007023!2.23e-09!115;UBERON:0002780!2.41e-09!41;UBERON:0001890!2.41e-09!41;UBERON:0006240!2.41e-09!41;UBERON:0005743!6.66e-09!86;UBERON:0001017!8.39e-09!82;UBERON:0000073!2.09e-08!94;UBERON:0001016!2.09e-08!94;UBERON:0001893!2.67e-08!34;UBERON:0002020!2.77e-08!34;UBERON:0003528!2.77e-08!34;UBERON:0001869!2.83e-08!32;UBERON:0003056!4.69e-08!61;UBERON:0002791!5.13e-08!33;UBERON:0002619!2.07e-07!22;UBERON:0000955!3.00e-07!69;UBERON:0006238!3.00e-07!69;UBERON:0001950!7.31e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.44e-10;22!UBERON:0001950;4.82e-10;20!UBERON:0001869;7.60e-10;32!UBERON:0002791;3.29e-09;32!UBERON:0003528;8.85e-09;34!UBERON:0002020;8.85e-09;34!UBERON:0001893;1.71e-08;34!UBERON:0000956;2.28e-08;25!UBERON:0000203;2.28e-08;25!UBERON:0002780;4.92e-08;41!UBERON:0001890;4.92e-08;41!UBERON:0000073;3.67e-07;53!UBERON:0002616;3.67e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.21e-11,53;UBERON:0002616,1.21e-11,53;UBERON:0001049,2.21e-11,56;UBERON:0005068,2.21e-11,56;UBERON:0006241,2.21e-11,56;UBERON:0007135,2.21e-11,56;UBERON:0001869,3.65e-11,32;UBERON:0002619,1.89e-10,22;UBERON:0001950,2.44e-10,20;UBERON:0003528,2.59e-10,34;UBERON:0002020,2.59e-10,34;UBERON:0002791,3.67e-10,32;UBERON:0001893,4.26e-10,34;UBERON:0002780,7.85e-10,41;UBERON:0001890,7.85e-10,41;UBERON:0003080,7.85e-10,41;UBERON:0006240,7.85e-10,41;UBERON:0001017,5.72e-09,81;UBERON:0001016,1.01e-08,89;UBERON:0000955,1.33e-08,68;UBERON:0006238,1.33e-08,68;UBERON:0000956,1.37e-08,25;UBERON:0000203,1.37e-08,25;UBERON:0007023,6.69e-08,114;UBERON:0002346,7.87e-08,86;UBERON:0003075,1.39e-07,82;UBERON:0007284,1.39e-07,82;UBERON:0010371,2.07e-07,104 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0,0.872338524100369,0,0,0,0.491467873003018,3.48900583986214,1.09220686065086,0.527533956456907,0.247532705920093,0.331397375727916,0,0.602694528023977,1.46062018077475,0,0.61560529038394,0.612002073732759,1.25381888591235,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0.464448369948228,0,1.204823675113,0,1.16200800870452,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.895661896959697,0,0.515151135268373,0.290796477559129,1.13362783106643,1.69808842831471,1.16214518452842,0.411167888021826,1.85823822537062,1.43846196161075,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,0,1.31769637679823,1.36453075028923,0.898893937780338,1.22433556948361,1.60464513538047,1.27867425159808,0.659702600373432,0.199463657621632,0.852449501065388,0.870627715885752,3.40431134814684,0.622822248995575,1.00499466102697,1.0429658368404,0.434377689410233,0,0,0.316462387440884,0,0,0,0.673971786878971,0.450530678524519,0,0,0,0,0,0,1.77901850772711,0.853460445133014,0.400395987036012,1.72425731986345,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0.263384084775077,0.983548850569165,1.57204305099666,0.822405995998037,0.167186495390678,0.32592226663359,0.473447805734733,1.94826728407911,0.557052284425868,0.294605907474837,0,0.270803863765016,0.512365278902701,0.650296737799391,0.328875809207352,0.276350017785848,0.869409257205157,0.741432815810302,1.33770414044857,3.1360657141493,0.566546713487831,0,0,0.253019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.903450714466637,0.76791966692651,0,0.710331756132051,0.821127996921047,0.80642697289893,1.33720097891754,0.579297615531196,0,0,0,0,0.50133791063589,0.579386075843295,0,0.973269740605272,0.378139268656271,1.10864698731282,0.614843499851882,1.24430121722827,0,0,0,0,0,1.19245312152671,0,0,0.198762407366705,0.860234595106124,1.38856200643038,0.56530794192401,1.25849830862972,0,0.417989933073621,0.516833518338658,0.71153252537342,1.67360306382335,0.805658634218294,1.52054421143703,0.976248230192678,0,2.43042584364528,0.17859945656816,0.673588117878509,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.529636723252875,0.573673241497627,0,1.12135520028461,0,0.24666754841716,0,0,0.490385709340376,1.05950199351452,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0.245668634623536,0.309977343527296,0,0.741800787835671,0,2.15585442544872,0.336672227908132,0.500474079487857,0.277064115484183,0.438977620880838,0,0.901428353439581,0.226864366320042,1.07633781413317,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0.772921620136887,0.558350568994769,0.506328996723799,0.0974370051611986,1.51460264546469,0.552299391853796,0.969876340912871,2.84007674013291,0.10075209822764,0,0.966304265816484,0,1.14721838155602,1.82960559194393,1.98794652482228,1.39432731443422,1.55491582523056,1.51392510525377,1.09493207722749,0,0,1.38134921352481,0.464367928031979,0,0.236613600079688,1.34867752062481,0.964044119533928,1.10293972732394,1.08939722046203,0.474541238222193,0.674156540800822,0.588664395376038,0.38474715694639,2.21446636387394,1.40241773803446,0.8231480226628,1.47008711385542,0,2.94848165003288,0.590789906681404,0,1.22988438543114,0.857839051492628,0.98775256867763,1.1240175325762,0,0.555530670951178,0.325808305310325,2.07986957055916,0,0.695582429850461,0.352226082707465,0.288732895522148,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0.148631162288728,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,1.15014803749563,0,0.264145302039678,0.414656231081544,0.288239906833923,0.12624243342638,0.444485260045183,0.763976851116555,1.17217447210047,1.71072446022705,0.616964956219941,0,1.14330573052231,0.784917590417525,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0.602878754119172,0,1.3996218765488,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0.784596007954691,0.985153801009636,0,0.385029108839245,2.03275699377971,5.20559415430487,0,0.670065061337395,1.27587750330633,0.749007023947182,0,1.24324654030811,0.858840442033979,0.500170521059677,0.271265023699736,1.45579603071565,0,0.315404830067869,0.585707074963566,0.300946099727719,2.27407504055985,0,0,0,0.260650843404249,1.17480694477644,0.686286847621712,0.620304078368662,0.431428401637234,1.38745825144478,0.303127571446259,1.66435439510497,0.907170879989041,0.248107807818777,1.2276957863045,0.280660094433074,0.512556597022804,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.604297247958111,0.601519410909855,0.276242966807689,0,0.182091168006717,0.131124414959424,0.451199612907412,0.539107359730903,0,0,1.05551628892876,0,1.1906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| |||
|short_description=p4@CCDC120 | |||
}} |
Revision as of 05:39, 23 January 2014
Short description: | p4@CCDC120 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC120_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_uc010nik.2_5end |
EntrezGene: | CCDC120 |
HGNC: | 28910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.21e-11 | 53 |
regional part of brain | 1.21e-11 | 53 |
neural tube | 2.21e-11 | 56 |
neural rod | 2.21e-11 | 56 |
future spinal cord | 2.21e-11 | 56 |
neural keel | 2.21e-11 | 56 |
cerebral hemisphere | 3.65e-11 | 32 |
regional part of cerebral cortex | 1.89e-10 | 22 |
neocortex | 2.44e-10 | 20 |
brain grey matter | 2.59e-10 | 34 |
gray matter | 2.59e-10 | 34 |
regional part of telencephalon | 3.67e-10 | 32 |
telencephalon | 4.26e-10 | 34 |
regional part of forebrain | 7.85e-10 | 41 |
forebrain | 7.85e-10 | 41 |
anterior neural tube | 7.85e-10 | 41 |
future forebrain | 7.85e-10 | 41 |
central nervous system | 5.72e-09 | 81 |
nervous system | 1.01e-08 | 89 |
brain | 1.33e-08 | 68 |
future brain | 1.33e-08 | 68 |
cerebral cortex | 1.37e-08 | 25 |
pallium | 1.37e-08 | 25 |
adult organism | 6.69e-08 | 114 |
neurectoderm | 7.87e-08 | 86 |
neural plate | 1.39e-07 | 82 |
presumptive neural plate | 1.39e-07 | 82 |
ecto-epithelium | 2.07e-07 | 104 |