FFCP PHASE1:Hg19::chrX:47093208..47093230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8237 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12609 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JXD3 | |||
|association_with_transcript=37bp_to_ENST00000377078_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_USP11_5end | |||
|id=chrX:47093208..47093230,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.39e-17!42;CL:0000860!1.00e-16!45;CL:0000766!3.61e-15!76;CL:0000738!2.20e-14!140;CL:0000839!5.12e-12!70;CL:0000557!6.51e-12!71;CL:0002031!3.79e-11!124;CL:0002009!9.63e-11!65;CL:0002194!2.02e-10!63;CL:0000576!2.02e-10!63;CL:0000040!2.02e-10!63;CL:0000559!2.02e-10!63;CL:0002087!5.34e-10!119;CL:0000037!2.07e-08!172;CL:0000566!2.07e-08!172;CL:0002032!2.25e-07!165;CL:0000837!2.25e-07!165;CL:0002393!3.77e-07!9;CL:0002397!3.77e-07!9;CL:0000988!3.81e-07!182;CL:0000763!5.09e-07!112;CL:0000049!5.09e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000766;7.11e-10;69!CL:0000860;5.39e-09;33!CL:0002057;5.39e-09;33!CL:0002393;2.97e-08;6!CL:0002397;2.97e-08;6!CL:0000576;3.96e-08;48!CL:0000094;8.07e-08;8!CL:0000473;4.87e-07;39!CL:0000234;4.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.39e-18,72;CL:0000860,7.82e-18,42;CL:0002057,7.82e-18,42;CL:0000473,5.73e-16,48;CL:0000234,5.73e-16,48;CL:0000738,1.47e-14,136;CL:0000839,1.73e-13,66;CL:0000557,2.83e-13,67;CL:0002009,1.57e-11,61;CL:0002194,1.96e-11,59;CL:0000576,1.96e-11,59;CL:0000040,1.96e-11,59;CL:0000559,1.96e-11,59;CL:0002031,4.29e-11,120;CL:0002393,7.17e-11,9;CL:0002397,7.17e-11,9;CL:0002087,9.68e-10,115;CL:0000037,3.46e-09,168;CL:0000763,3.84e-09,108;CL:0000049,3.84e-09,108;CL:0002032,1.36e-08,161;CL:0000837,1.36e-08,161;CL:0000988,1.39e-08,177;CL:0000094,9.11e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.74e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.98e-15!115;UBERON:0001049!9.68e-14!57;UBERON:0005068!9.68e-14!57;UBERON:0006241!9.68e-14!57;UBERON:0007135!9.68e-14!57;UBERON:0002616!8.82e-12!59;UBERON:0002371!1.15e-10!80;UBERON:0001474!4.94e-10!86;UBERON:0001017!9.82e-10!82;UBERON:0003075!1.00e-09!86;UBERON:0007284!1.00e-09!86;UBERON:0002346!1.11e-09!90;UBERON:0003080!1.87e-09!42;UBERON:0005743!1.87e-09!86;UBERON:0000955!1.90e-09!69;UBERON:0006238!1.90e-09!69;UBERON:0002780!1.91e-09!41;UBERON:0001890!1.91e-09!41;UBERON:0006240!1.91e-09!41;UBERON:0002390!1.37e-08!102;UBERON:0003061!1.37e-08!102;UBERON:0000073!3.08e-08!94;UBERON:0001016!3.08e-08!94;UBERON:0004765!5.14e-08!101;UBERON:0001434!5.14e-08!101;UBERON:0003056!2.81e-07!61;UBERON:0002193!6.40e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.36e-11;53!UBERON:0002616;5.36e-11;53!UBERON:0002780;5.59e-10;41!UBERON:0001890;5.59e-10;41!UBERON:0001893;3.56e-08;34!UBERON:0002791;1.04e-07;32!UBERON:0000125;1.32e-07;9!UBERON:0002308;1.32e-07;9!UBERON:0003528;1.76e-07;34!UBERON:0002020;1.76e-07;34!UBERON:0001869;2.61e-07;32!UBERON:0004732;8.87e-07;13!UBERON:0007023;9.34e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.92e-21,56;UBERON:0005068,4.92e-21,56;UBERON:0006241,4.92e-21,56;UBERON:0007135,4.92e-21,56;UBERON:0000073,4.13e-20,53;UBERON:0002616,4.13e-20,53;UBERON:0007023,1.37e-17,114;UBERON:0001017,5.55e-16,81;UBERON:0000955,6.49e-16,68;UBERON:0006238,6.49e-16,68;UBERON:0002780,8.16e-15,41;UBERON:0001890,8.16e-15,41;UBERON:0003080,8.16e-15,41;UBERON:0006240,8.16e-15,41;UBERON:0001016,1.47e-14,89;UBERON:0003075,4.64e-13,82;UBERON:0007284,4.64e-13,82;UBERON:0002371,9.35e-13,76;UBERON:0002346,2.14e-12,86;UBERON:0001474,4.68e-12,82;UBERON:0010371,4.82e-11,104;UBERON:0004765,2.01e-10,90;UBERON:0002390,3.48e-10,98;UBERON:0003061,3.48e-10,98;UBERON:0001893,4.46e-10,34;UBERON:0003528,4.93e-10,34;UBERON:0002020,4.93e-10,34;UBERON:0001434,2.85e-09,100;UBERON:0003056,3.38e-09,61;UBERON:0002791,5.28e-09,32;UBERON:0001869,1.03e-08,32;UBERON:0000125,1.41e-08,9;UBERON:0002308,1.41e-08,9;UBERON:0002405,3.93e-08,93;UBERON:0002193,5.10e-08,108;UBERON:0004732,1.58e-07,13;UBERON:0003076,1.58e-07,15;UBERON:0003057,1.58e-07,15;UBERON:0009663,1.90e-07,7;UBERON:0001894,3.83e-07,7;UBERON:0006222,3.83e-07,7;UBERON:0002420,8.26e-07,9;UBERON:0007245,8.26e-07,9;UBERON:0010009,8.26e-07,9;UBERON:0010011,8.26e-07,9;UBERON:0000454,8.26e-07,9 | |||
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| |||
|short_description=p3@USP11 | |||
}} |
Revision as of 05:30, 23 January 2014
Short description: | p3@USP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP11_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 37bp_to_ENST00000377078_5end |
EntrezGene: | USP11 |
HGNC: | 12609 |
UniProt: | Q5JXD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.39e-18 | 72 |
classical monocyte | 7.82e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.82e-18 | 42 |
defensive cell | 5.73e-16 | 48 |
phagocyte | 5.73e-16 | 48 |
leukocyte | 1.47e-14 | 136 |
myeloid lineage restricted progenitor cell | 1.73e-13 | 66 |
granulocyte monocyte progenitor cell | 2.83e-13 | 67 |
macrophage dendritic cell progenitor | 1.57e-11 | 61 |
monopoietic cell | 1.96e-11 | 59 |
monocyte | 1.96e-11 | 59 |
monoblast | 1.96e-11 | 59 |
promonocyte | 1.96e-11 | 59 |
hematopoietic lineage restricted progenitor cell | 4.29e-11 | 120 |
intermediate monocyte | 7.17e-11 | 9 |
CD14-positive, CD16-positive monocyte | 7.17e-11 | 9 |
nongranular leukocyte | 9.68e-10 | 115 |
hematopoietic stem cell | 3.46e-09 | 168 |
myeloid cell | 3.84e-09 | 108 |
common myeloid progenitor | 3.84e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.36e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-08 | 161 |
hematopoietic cell | 1.39e-08 | 177 |
granulocyte | 9.11e-08 | 8 |