FFCP PHASE1:Hg19::chrX:19689229..19689240,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13867 | |||
|TSSclassifier=weak | |||
|UniProt=B7Z1D5,Q5JPT4 | |||
|association_with_transcript=-110bp_to_NM_001184960_5end | |||
|description=CAGE_peak_28_at_SH3KBP1_5end | |||
|id=chrX:19689229..19689240,- | |||
|ontology_enrichment_celltype=CL:0000077!7.30e-11!19;CL:0000066!1.06e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.88e-16;19!CL:0002379;1.42e-13;1!CL:0002097;1.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.04e-16,19;CL:0002379,1.61e-13,1;CL:0002097,1.20e-07,2;CL:0000076,7.67e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.29e-09!239;DOID:305!1.39e-09!106;DOID:0050687!7.14e-09!143;DOID:162!1.47e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.42e-13;1!DOID:3565;1.42e-13;1!DOID:3908;9.62e-11;5!DOID:1324;5.44e-08;15!DOID:0050615;1.60e-07;16!DOID:3910;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.61e-13,1;DOID:3565,1.61e-13,1;DOID:3908,7.51e-11,5;DOID:1324,4.54e-08,15;DOID:0050615,1.35e-07,16;DOID:3910,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005157!2.86e-07!51;UBERON:0008947!5.64e-07!38;UBERON:0003258!5.64e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.99e-07;2!UBERON:0002173;1.99e-07;2!UBERON:0002186;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.75e-07,2;UBERON:0002173,1.75e-07,2;UBERON:0002186,1.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.964044119533928,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,3.48613383440118,1.19967589418468,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0,0,0,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.539210106883961,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0.664653872707185,0,0.313932918407225,2.38944859545918,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.34823682632161,0,0,2.03188295707079,1.46178634172371,1.64230914106418,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,1.97216073266129,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0.339936274560377,0,0,0,0,2.9084762440336,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.813741466409323,0,0.107410557042488,0,0,0,0,0,0,2.88929745610955,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0,0.308801447160972,0.438568099157414,0.176689145945881,0.771656153083659,2.36519416914302,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0.690359926060101,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.827356886187777,0.111231401892069,0,0,4.48435461302062,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,6.70500256259814,0.240724100067505,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.714193294391221,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@SH3KBP1 | |||
}} |
Revision as of 05:01, 23 January 2014
Short description: | p28@SH3KBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SH3KBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_NM_001184960_5end |
EntrezGene: | SH3KBP1 |
HGNC: | 13867 |
UniProt: | B7Z1D5Q5JPT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.04e-16 | 19 |
meningothelial cell | 1.61e-13 | 1 |
cortical cell of adrenal gland | 1.20e-07 | 2 |
squamous epithelial cell | 7.67e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.75e-07 | 2 |
alveolar duct | 1.75e-07 | 2 |
bronchiole | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.61e-13 | 1 |
meningioma | 1.61e-13 | 1 |
non-small cell lung carcinoma | 7.51e-11 | 5 |
lung cancer | 4.54e-08 | 15 |
respiratory system cancer | 1.35e-07 | 16 |
lung adenocarcinoma | 1.75e-07 | 2 |