FFCP PHASE1:Hg19::chrX:9880590..9880605,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |||
|TSSclassifier=strong | |||
|UniProt=C9IZC6,B3KU73 | |||
|association_with_transcript=-117bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_SHROOM2_5end | |||
|id=chrX:9880590..9880605,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.29e-10;1!UBERON:0006601;1.55e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.61e-59!82;UBERON:0001049!1.67e-57!57;UBERON:0005068!1.67e-57!57;UBERON:0006241!1.67e-57!57;UBERON:0007135!1.67e-57!57;UBERON:0005743!1.86e-55!86;UBERON:0000073!1.93e-53!94;UBERON:0001016!1.93e-53!94;UBERON:0001893!2.67e-52!34;UBERON:0000955!4.14e-52!69;UBERON:0006238!4.14e-52!69;UBERON:0002020!5.66e-52!34;UBERON:0003528!5.66e-52!34;UBERON:0002780!3.81e-51!41;UBERON:0001890!3.81e-51!41;UBERON:0006240!3.81e-51!41;UBERON:0002791!3.20e-50!33;UBERON:0003080!1.05e-49!42;UBERON:0002616!2.05e-49!59;UBERON:0001869!7.86e-49!32;UBERON:0002619!1.37e-45!22;UBERON:0000153!1.35e-44!129;UBERON:0007811!1.35e-44!129;UBERON:0000033!5.76e-44!123;UBERON:0000956!3.51e-43!25;UBERON:0000203!3.51e-43!25;UBERON:0001950!1.16e-41!20;UBERON:0000924!4.82e-39!173;UBERON:0006601!4.82e-39!173;UBERON:0004121!5.84e-39!169;UBERON:0003075!5.49e-38!86;UBERON:0007284!5.49e-38!86;UBERON:0002346!1.67e-37!90;UBERON:0003056!2.21e-33!61;UBERON:0007023!6.49e-33!115;UBERON:0000064!7.04e-17!219;UBERON:0000475!7.21e-16!365;UBERON:0000477!8.33e-16!286;UBERON:0004111!9.55e-15!241;UBERON:0000200!1.61e-14!6;UBERON:0001871!3.29e-14!7;UBERON:0001872!2.94e-12!5;UBERON:0002021!3.00e-12!5;UBERON:0000025!3.30e-12!194;UBERON:0002298!1.18e-11!8;UBERON:0000349!1.52e-11!5;UBERON:0002420!5.70e-11!9;UBERON:0007245!5.70e-11!9;UBERON:0010009!5.70e-11!9;UBERON:0010011!5.70e-11!9;UBERON:0000454!5.70e-11!9;UBERON:0000062!1.00e-10!511;UBERON:0000481!1.40e-10!347;UBERON:0002308!1.75e-10!9;UBERON:0000125!1.75e-10!9;UBERON:0000923!1.26e-09!604;UBERON:0005291!1.26e-09!604;UBERON:0006598!1.26e-09!604;UBERON:0002532!1.26e-09!604;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0002050!1.42e-09!605;UBERON:0005423!1.42e-09!605;UBERON:0000922!3.25e-09!612;UBERON:0004732!4.33e-09!13;UBERON:0000467!1.32e-08!625;UBERON:0000480!1.48e-08!626;UBERON:0002771!4.81e-08!3;UBERON:0000483!5.54e-08!309;UBERON:0000119!8.83e-08!312;UBERON:0000468!1.54e-07!659;UBERON:0004733!2.07e-07!12;UBERON:0002028!2.07e-07!12;UBERON:0007277!2.07e-07!12;UBERON:0009663!2.39e-07!7;UBERON:0000988!7.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.10e-94;20!UBERON:0002619;8.20e-86;22!UBERON:0000956;1.32e-75;25!UBERON:0000203;1.32e-75;25!UBERON:0001869;1.33e-59;32!UBERON:0001893;1.64e-56;34!UBERON:0002791;5.96e-52;32!UBERON:0003528;4.49e-49;34!UBERON:0002020;4.49e-49;34!UBERON:0000200;2.44e-47;6!UBERON:0001872;9.57e-40;5!UBERON:0002780;1.95e-35;41!UBERON:0001890;1.95e-35;41!UBERON:0002021;3.79e-26;5!UBERON:0001870;1.41e-24;3!UBERON:0000955;1.95e-21;68!UBERON:0000073;1.35e-20;53!UBERON:0002616;1.35e-20;53!UBERON:0001871;1.64e-18;6!UBERON:0002771;5.47e-17;2!UBERON:0002702;5.47e-17;2!UBERON:0001017;1.45e-16;75!UBERON:0001016;1.65e-12;83!UBERON:0000941;8.29e-10;1!UBERON:0001785;8.29e-10;1!UBERON:0002464;8.29e-10;1!UBERON:0004904;8.29e-10;1!UBERON:0001021;8.29e-10;1!UBERON:0002581;2.34e-09;1!UBERON:0002902;2.34e-09;1!UBERON:0003112;2.34e-09;1!UBERON:0011158;2.34e-09;1!UBERON:0009899;2.34e-09;1!UBERON:0007190;2.34e-09;1!UBERON:0003128;2.34e-09;1!UBERON:0001703;2.34e-09;1!UBERON:0002241;2.34e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.59e-94,20;UBERON:0002619,4.46e-86,22;UBERON:0000956,7.69e-76,25;UBERON:0000203,7.69e-76,25;UBERON:0001869,7.79e-67,32;UBERON:0001893,7.46e-63,34;UBERON:0002791,3.48e-59,32;UBERON:0003528,1.20e-55,34;UBERON:0002020,1.20e-55,34;UBERON:0002780,6.69e-52,41;UBERON:0001890,6.69e-52,41;UBERON:0003080,6.69e-52,41;UBERON:0006240,6.69e-52,41;UBERON:0000200,2.30e-47,6;UBERON:0000073,1.01e-39,53;UBERON:0002616,1.01e-39,53;UBERON:0001872,2.56e-39,5;UBERON:0003056,1.06e-38,61;UBERON:0000955,4.33e-38,68;UBERON:0006238,4.33e-38,68;UBERON:0001049,1.77e-37,56;UBERON:0005068,1.77e-37,56;UBERON:0006241,1.77e-37,56;UBERON:0007135,1.77e-37,56;UBERON:0001017,2.80e-35,81;UBERON:0001016,4.48e-35,89;UBERON:0003075,4.02e-28,82;UBERON:0007284,4.02e-28,82;UBERON:0002346,1.10e-26,86;UBERON:0002021,2.52e-26,5;UBERON:0001870,8.75e-25,3;UBERON:0010371,1.44e-21,104;UBERON:0004121,9.09e-19,171;UBERON:0000924,9.09e-19,171;UBERON:0006601,9.09e-19,171;UBERON:0001871,1.00e-18,6;UBERON:0010314,1.93e-18,132;UBERON:0002702,4.68e-17,2;UBERON:0002771,5.97e-17,2;UBERON:0007023,3.22e-15,114;UBERON:0011216,1.56e-13,223;UBERON:0000941,7.98e-10,1;UBERON:0001785,7.98e-10,1;UBERON:0002464,7.98e-10,1;UBERON:0004904,7.98e-10,1;UBERON:0001021,7.98e-10,1;UBERON:0003902,7.98e-10,1;UBERON:0005425,7.98e-10,1;UBERON:0002902,1.12e-09,1;UBERON:0009899,1.12e-09,1;UBERON:0002581,1.21e-09,1;UBERON:0003112,2.77e-09,1;UBERON:0011158,2.77e-09,1;UBERON:0003128,2.77e-09,1;UBERON:0001703,2.77e-09,1;UBERON:0002241,2.77e-09,1;UBERON:0004761,2.77e-09,1;UBERON:0009617,2.77e-09,1;UBERON:0007190,4.50e-09,1;UBERON:0000025,6.39e-09,192;UBERON:0004111,1.61e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06712765022621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.667852230137435,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0.295547618953547,0.87754158861589,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.702793337176017,0,0.19566461893209,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.64608069485285,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.728994679896296,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.34228891392159,1.251909307065,0.573409195690071,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,1.41696576325585,0.478901577171454,2.05116364240755,1.26035848110859,1.9364030689981,1.29180516505481,2.85538840518309,0.0981477185010256,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0,0,0,1.08060135389431,1.56215619722769,1.03343398250592,1.20490039368423,1.09394961803644,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.543757863814654,1.84163765975977,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0.8453114551668,0,0,0,0.599646935549574,0,0,0,0,0,0.286679166302903,0,1.69978725477287,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0,0.322944549180031,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p13@SHROOM2 | |||
}} |
Revision as of 04:45, 23 January 2014
Short description: | p13@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SHROOM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -117bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | C9IZC6B3KU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data