FFCP PHASE1:Hg19::chr9:131486367..131486413,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19159 | |||
|TSSclassifier=weak | |||
|UniProt=Q96GR4,Q5T269,Q5T266 | |||
|association_with_transcript=0bp_to_ENST00000372663,ENST00000372664,ENST00000372667,ENST00000372672,ENST00000406904,ENST00000452105,ENST00000467312,NM_032799,uc004bvy.2,uc004bvz.2_5end | |||
|description=CAGE_peak_1_at_ZDHHC12_5end | |||
|id=chr9:131486367..131486413,- | |||
|ontology_enrichment_celltype=CL:0000066!8.86e-32!254;CL:0000548!3.18e-26!679;CL:0000004!3.18e-26!679;CL:0000255!3.18e-26!679;CL:0000012!5.18e-26!682;CL:0000003!1.31e-21!722;CL:0000063!6.62e-18!578;CL:0000144!2.84e-14!625;CL:0002321!2.54e-13!248;CL:0000220!3.21e-13!246;CL:0002371!1.80e-12!591;CL:0000076!9.38e-09!62;CL:0000222!2.80e-07!119;CL:0000213!3.58e-07!57;CL:0000215!3.58e-07!57;CL:0002078!6.62e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.02e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.37e-32,253;CL:0002321,3.03e-13,250;CL:0000076,7.93e-09,63;CL:1000449,8.60e-08,15;CL:0000213,1.85e-07,58;CL:0000215,1.85e-07,58;CL:0002078,3.30e-07,45;CL:0000222,3.51e-07,121;CL:0000115,8.71e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.50e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.20e-11!169;UBERON:0000925!8.20e-11!169;UBERON:0006595!8.20e-11!169;UBERON:0001007!3.56e-08!155;UBERON:0001555!3.56e-08!155;UBERON:0007026!3.56e-08!155;UBERON:0000077!2.96e-07!130;UBERON:0004921!9.83e-07!129;UBERON:0004185!9.83e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.02e-08;15!UBERON:0004819;9.02e-08;15!UBERON:0001285;9.02e-08;15!UBERON:0007684;9.02e-08;15!UBERON:0000353;2.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.17e-10,160;UBERON:0000925,1.17e-10,160;UBERON:0006595,1.17e-10,160;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0004211,8.60e-08,15;UBERON:0009773,8.60e-08,15;UBERON:0001231,8.60e-08,15;UBERON:0001285,8.60e-08,15;UBERON:0007684,8.60e-08,15;UBERON:0004208,8.60e-08,15;UBERON:0006554,9.01e-08,47;UBERON:0000353,2.65e-07,15;UBERON:0001008,4.43e-07,48;UBERON:0004921,7.79e-07,118;UBERON:0006555,8.88e-07,16;UBERON:0004819,8.88e-07,16 | |||
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| |||
|short_description=p1@ZDHHC12 | |||
}} |
Revision as of 03:35, 23 January 2014
Short description: | p1@ZDHHC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZDHHC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372663, ENST00000372664, ENST00000372667, ENST00000372672, ENST00000406904, ENST00000452105, ENST00000467312, NM_032799, uc004bvy.2, uc004bvz.2_5end |
EntrezGene: | ZDHHC12 |
HGNC: | 19159 |
UniProt: | Q96GR4Q5T269Q5T266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.37e-32 | 253 |
embryonic cell | 3.03e-13 | 250 |
squamous epithelial cell | 7.93e-09 | 63 |
epithelial cell of nephron | 8.60e-08 | 15 |
lining cell | 1.85e-07 | 58 |
barrier cell | 1.85e-07 | 58 |
meso-epithelial cell | 3.30e-07 | 45 |
mesodermal cell | 3.51e-07 | 121 |
endothelial cell | 8.71e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.17e-10 | 160 |
endoderm | 1.17e-10 | 160 |
presumptive endoderm | 1.17e-10 | 160 |
digestive system | 2.47e-08 | 145 |
digestive tract | 2.47e-08 | 145 |
primitive gut | 2.47e-08 | 145 |
nephron epithelium | 8.60e-08 | 15 |
renal tubule | 8.60e-08 | 15 |
nephron tubule | 8.60e-08 | 15 |
nephron | 8.60e-08 | 15 |
uriniferous tubule | 8.60e-08 | 15 |
nephrogenic mesenchyme | 8.60e-08 | 15 |
urinary system structure | 9.01e-08 | 47 |
parenchyma | 2.65e-07 | 15 |
renal system | 4.43e-07 | 48 |
subdivision of digestive tract | 7.79e-07 | 118 |
excretory tube | 8.88e-07 | 16 |
kidney epithelium | 8.88e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-07 | 106 |