FFCP PHASE1:Hg19::chr9:125703282..125703337,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23637 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17155 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y3P9,B5MCD9,B9A6L2 | |||
|association_with_transcript=0bp_to_ENST00000317419,ENST00000373647,ENST00000402311,ENST00000459903,NM_012197,uc004bnm.1,uc011lzh.1_5end | |||
|description=CAGE_peak_1_at_RABGAP1_5end | |||
|id=chr9:125703282..125703337,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.80e-08!42;CL:0000860!1.08e-07!45;CL:0000738!2.52e-07!140;CL:0000766!5.47e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-07;33!CL:0002057;3.19e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.80e-08,42;CL:0002057,5.80e-08,42;CL:0000738,1.16e-07,136;CL:0000766,1.63e-07,72;CL:0002009,4.84e-07,61;CL:0000473,4.95e-07,48;CL:0000234,4.95e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.16e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-28!115;UBERON:0001049!5.55e-19!57;UBERON:0005068!5.55e-19!57;UBERON:0006241!5.55e-19!57;UBERON:0007135!5.55e-19!57;UBERON:0002780!7.96e-18!41;UBERON:0001890!7.96e-18!41;UBERON:0006240!7.96e-18!41;UBERON:0001017!8.22e-18!82;UBERON:0000073!8.72e-18!94;UBERON:0001016!8.72e-18!94;UBERON:0003080!2.30e-17!42;UBERON:0000955!2.88e-17!69;UBERON:0006238!2.88e-17!69;UBERON:0005743!7.19e-17!86;UBERON:0002616!2.70e-16!59;UBERON:0001893!2.58e-15!34;UBERON:0002020!7.33e-15!34;UBERON:0003528!7.33e-15!34;UBERON:0002791!1.12e-14!33;UBERON:0001869!3.40e-14!32;UBERON:0000153!9.37e-13!129;UBERON:0007811!9.37e-13!129;UBERON:0002346!1.55e-12!90;UBERON:0000924!4.03e-12!173;UBERON:0006601!4.03e-12!173;UBERON:0000033!6.37e-12!123;UBERON:0003075!1.64e-11!86;UBERON:0007284!1.64e-11!86;UBERON:0004121!3.16e-11!169;UBERON:0003056!6.26e-11!61;UBERON:0000956!7.68e-11!25;UBERON:0000203!7.68e-11!25;UBERON:0002619!1.11e-10!22;UBERON:0001950!4.59e-10!20;UBERON:0000062!1.18e-09!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.53e-13;34!UBERON:0002780;2.56e-13;41!UBERON:0001890;2.56e-13;41!UBERON:0001869;8.21e-13;32!UBERON:0002791;1.02e-12;32!UBERON:0003528;1.27e-12;34!UBERON:0002020;1.27e-12;34!UBERON:0000073;4.01e-11;53!UBERON:0002616;4.01e-11;53!UBERON:0000956;7.36e-11;25!UBERON:0000203;7.36e-11;25!UBERON:0002619;1.11e-10;22!UBERON:0001950;4.83e-10;20!UBERON:0001017;4.01e-09;75!UBERON:0007023;2.39e-08;114!UBERON:0001016;3.81e-08;83!UBERON:0000955;7.24e-08;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.58e-28,114;UBERON:0001049,2.31e-19,56;UBERON:0005068,2.31e-19,56;UBERON:0006241,2.31e-19,56;UBERON:0007135,2.31e-19,56;UBERON:0001016,6.29e-19,89;UBERON:0001017,4.58e-18,81;UBERON:0000073,7.03e-18,53;UBERON:0002616,7.03e-18,53;UBERON:0002780,7.96e-18,41;UBERON:0001890,7.96e-18,41;UBERON:0003080,7.96e-18,41;UBERON:0006240,7.96e-18,41;UBERON:0000955,1.49e-17,68;UBERON:0006238,1.49e-17,68;UBERON:0001893,2.58e-15,34;UBERON:0003528,7.33e-15,34;UBERON:0002020,7.33e-15,34;UBERON:0001869,3.40e-14,32;UBERON:0002791,4.79e-14,32;UBERON:0002346,1.03e-13,86;UBERON:0004121,1.17e-12,171;UBERON:0000924,1.17e-12,171;UBERON:0006601,1.17e-12,171;UBERON:0003075,1.19e-12,82;UBERON:0007284,1.19e-12,82;UBERON:0003056,1.48e-11,61;UBERON:0000956,7.68e-11,25;UBERON:0000203,7.68e-11,25;UBERON:0002619,1.11e-10,22;UBERON:0011216,3.33e-10,223;UBERON:0001950,4.59e-10,20;UBERON:0010371,4.05e-08,104;UBERON:0010314,9.63e-07,132 | |||
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2 | |||
|short_description=p1@RABGAP1 | |||
}} |
Revision as of 03:12, 23 January 2014
Short description: | p1@RABGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RABGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317419, ENST00000373647, ENST00000402311, ENST00000459903, NM_012197, uc004bnm.1, uc011lzh.1_5end |
EntrezGene: | RABGAP1 |
HGNC: | 17155 |
UniProt: | Q9Y3P9B5MCD9B9A6L2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.80e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.80e-08 | 42 |
leukocyte | 1.16e-07 | 136 |
myeloid leukocyte | 1.63e-07 | 72 |
macrophage dendritic cell progenitor | 4.84e-07 | 61 |
defensive cell | 4.95e-07 | 48 |
phagocyte | 4.95e-07 | 48 |