FFCP PHASE1:Hg19::chr9:125133315..125133339,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9604 | |||
|TSSclassifier=strong | |||
|UniProt=P23219 | |||
|association_with_transcript=-19bp_to_ENST00000223423,ENST00000362012_5end | |||
|coexpression_cluster_id=C2017 | |||
|description=CAGE_peak_1_at_PTGS1_5end | |||
|id=chr9:125133315..125133339,+ | |||
|ontology_enrichment_celltype=CL:0000048!4.10e-16!430;CL:0000057!9.82e-16!75;CL:0000723!1.69e-15!436;CL:0000034!2.71e-15!444;CL:0000055!5.06e-13!180;CL:0000187!7.49e-13!54;CL:0000680!9.11e-13!57;CL:0000056!9.11e-13!57;CL:0000355!9.11e-13!57;CL:0000183!1.20e-11!59;CL:0000192!2.49e-10!42;CL:0000514!2.49e-10!42;CL:0000393!1.27e-09!60;CL:0000211!1.27e-09!60;CL:0002494!4.72e-09!16;CL:0002320!8.07e-09!365;CL:0002371!2.82e-08!591;CL:0000134!4.68e-08!358;CL:0000359!5.91e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002494;3.11e-09;16!CL:0000192;9.16e-09;43!CL:0000187;3.50e-08;55!CL:0000057;5.27e-08;73!CL:0000359;9.63e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.91e-17,427;CL:0000057,9.15e-17,76;CL:0000723,1.01e-16,433;CL:0000034,2.10e-16,441;CL:0000187,2.47e-13,55;CL:0000680,3.01e-13,58;CL:0000056,3.01e-13,58;CL:0000355,3.01e-13,58;CL:0000192,9.51e-11,43;CL:0000514,9.51e-11,43;CL:0000393,9.39e-10,61;CL:0000211,9.39e-10,61;CL:0002320,1.59e-09,361;CL:0002494,3.17e-09,16;CL:0000134,1.02e-08,354;CL:0000359,5.96e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;9.16e-09;43!CL:0000355;3.27e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.88e-17!113;UBERON:0004535!2.06e-17!110;UBERON:0000914!4.07e-16!83;UBERON:0002329!4.07e-16!83;UBERON:0003077!4.07e-16!83;UBERON:0003059!4.07e-16!83;UBERON:0007282!4.07e-16!83;UBERON:0009618!4.07e-16!83;UBERON:0007285!4.07e-16!83;UBERON:0004872!7.60e-16!84;UBERON:0004290!6.65e-15!70;UBERON:0002385!7.81e-13!63;UBERON:0001015!7.81e-13!63;UBERON:0000383!7.81e-13!63;UBERON:0002204!1.60e-12!167;UBERON:0001637!2.14e-12!42;UBERON:0003509!2.14e-12!42;UBERON:0004572!2.14e-12!42;UBERON:0000486!3.64e-12!82;UBERON:0001134!4.48e-12!61;UBERON:0002036!4.48e-12!61;UBERON:0003082!4.48e-12!61;UBERON:0003081!5.51e-12!216;UBERON:0000479!7.47e-12!787;UBERON:0000926!2.76e-11!448;UBERON:0004120!2.76e-11!448;UBERON:0006603!2.76e-11!448;UBERON:0004573!3.42e-11!33;UBERON:0004571!3.42e-11!33;UBERON:0001981!3.43e-11!60;UBERON:0007500!3.43e-11!60;UBERON:0004537!3.43e-11!60;UBERON:0006965!3.43e-11!60;UBERON:0000055!2.51e-10!69;UBERON:0002049!8.89e-10!79;UBERON:0007798!8.89e-10!79;UBERON:0000948!1.18e-09!24;UBERON:0005498!1.18e-09!24;UBERON:0004140!1.18e-09!24;UBERON:0009881!1.18e-09!24;UBERON:0004141!1.18e-09!24;UBERON:0003084!1.18e-09!24;UBERON:0007005!1.18e-09!24;UBERON:0004139!1.18e-09!24;UBERON:0004291!1.18e-09!24;UBERON:0007100!2.50e-09!27;UBERON:0005256!5.03e-09!143;UBERON:0000467!5.32e-09!625;UBERON:0000480!7.28e-09!626;UBERON:0000468!1.97e-08!659;UBERON:0003914!2.04e-08!118;UBERON:0002384!6.99e-08!375;UBERON:0002050!9.81e-07!605;UBERON:0005423!9.81e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.56e-10;33!UBERON:0004571;2.56e-10;33!UBERON:0001637;2.29e-09;42!UBERON:0003509;2.29e-09;42!UBERON:0004572;2.29e-09;42!UBERON:0000948;6.14e-09;22!UBERON:0007100;1.20e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,9.70e-23,315;UBERON:0004120,9.70e-23,315;UBERON:0006603,9.70e-23,315;UBERON:0001009,7.35e-17,112;UBERON:0004535,8.21e-17,109;UBERON:0007524,1.43e-15,73;UBERON:0002329,1.94e-15,71;UBERON:0003059,1.94e-15,71;UBERON:0007282,1.94e-15,71;UBERON:0004290,1.94e-15,71;UBERON:0009618,1.94e-15,71;UBERON:0004872,4.22e-15,83;UBERON:0003077,4.55e-15,72;UBERON:0007285,4.55e-15,72;UBERON:0002204,4.72e-14,167;UBERON:0002385,2.57e-13,64;UBERON:0001015,2.57e-13,64;UBERON:0000383,2.57e-13,64;UBERON:0000479,2.69e-13,773;UBERON:0007503,7.59e-13,78;UBERON:0000486,1.39e-12,83;UBERON:0001134,1.54e-12,62;UBERON:0002036,1.54e-12,62;UBERON:0003082,1.54e-12,62;UBERON:0003081,1.82e-12,203;UBERON:0001637,2.08e-12,42;UBERON:0003509,2.08e-12,42;UBERON:0004572,2.08e-12,42;UBERON:0004573,2.06e-11,33;UBERON:0004571,2.06e-11,33;UBERON:0007500,2.63e-10,59;UBERON:0001981,2.63e-10,59;UBERON:0004537,2.63e-10,59;UBERON:0006965,2.63e-10,59;UBERON:0000948,7.68e-10,24;UBERON:0005498,7.68e-10,24;UBERON:0004140,7.68e-10,24;UBERON:0009881,7.68e-10,24;UBERON:0004141,7.68e-10,24;UBERON:0003084,7.68e-10,24;UBERON:0007005,7.68e-10,24;UBERON:0004139,7.68e-10,24;UBERON:0004291,7.68e-10,24;UBERON:0007100,1.66e-09,27;UBERON:0000055,2.17e-09,68;UBERON:0000923,2.90e-09,560;UBERON:0010316,2.90e-09,560;UBERON:0005291,2.90e-09,560;UBERON:0006598,2.90e-09,560;UBERON:0010317,2.90e-09,560;UBERON:0002532,2.90e-09,560;UBERON:0002049,4.71e-09,78;UBERON:0007798,4.71e-09,78;UBERON:0002050,4.73e-09,564;UBERON:0002384,1.35e-08,371;UBERON:0005256,2.41e-08,122;UBERON:0005423,4.42e-08,581;UBERON:0003914,8.16e-08,117 | |||
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| |||
|short_description=p1@PTGS1 | |||
}} |
Revision as of 03:10, 23 January 2014
Short description: | p1@PTGS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGS1_5end |
Coexpression cluster: | C2017_Fibroblast_smooth_Smooth_bladder_hepatic_Cardiac_Mesenchymal |
Association with transcript: | -19bp_to_ENST00000223423, ENST00000362012_5end |
EntrezGene: | PTGS1 |
HGNC: | 9604 |
UniProt: | P23219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.91e-17 | 427 |
fibroblast | 9.15e-17 | 76 |
somatic stem cell | 1.01e-16 | 433 |
stem cell | 2.10e-16 | 441 |
muscle cell | 2.47e-13 | 55 |
muscle precursor cell | 3.01e-13 | 58 |
myoblast | 3.01e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-13 | 58 |
smooth muscle cell | 9.51e-11 | 43 |
smooth muscle myoblast | 9.51e-11 | 43 |
electrically responsive cell | 9.39e-10 | 61 |
electrically active cell | 9.39e-10 | 61 |
connective tissue cell | 1.59e-09 | 361 |
cardiocyte | 3.17e-09 | 16 |
mesenchymal cell | 1.02e-08 | 354 |
vascular associated smooth muscle cell | 5.96e-08 | 32 |