FFCP PHASE1:Hg19::chr9:115913230..115913266,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11017 | |||
|TSSclassifier=strong | |||
|UniProt=O15432,Q53X94 | |||
|association_with_transcript=0bp_to_ENST00000490809,NM_001860,uc004bgq.2,uc011lxb.1_5end | |||
|coexpression_cluster_id=C2936 | |||
|description=CAGE_peak_2_at_SLC31A2_5end | |||
|id=chr9:115913230..115913266,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.67e-28!76;CL:0002009!1.32e-26!65;CL:0002057!1.70e-26!42;CL:0002194!4.45e-26!63;CL:0000576!4.45e-26!63;CL:0000040!4.45e-26!63;CL:0000559!4.45e-26!63;CL:0000557!7.35e-25!71;CL:0000860!9.40e-24!45;CL:0000839!7.00e-22!70;CL:0000763!2.25e-11!112;CL:0000049!2.25e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.08e-20;33!CL:0002057;3.08e-20;33!CL:0000473;8.69e-20;39!CL:0000234;8.69e-20;39!CL:0000576;1.24e-16;48!CL:0000766;1.11e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.26e-30,72;CL:0000473,7.65e-30,48;CL:0000234,7.65e-30,48;CL:0002009,8.90e-29,61;CL:0002194,2.84e-28,59;CL:0000576,2.84e-28,59;CL:0000040,2.84e-28,59;CL:0000559,2.84e-28,59;CL:0000860,1.43e-26,42;CL:0002057,1.43e-26,42;CL:0000557,1.82e-26,67;CL:0000839,1.64e-23,66;CL:0000763,4.99e-12,108;CL:0000049,4.99e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.35e-23!102;UBERON:0003061!7.35e-23!102;UBERON:0002193!7.80e-23!112;UBERON:0002371!2.05e-21!80;UBERON:0002405!3.40e-18!115;UBERON:0001474!6.72e-18!86;UBERON:0004765!8.38e-17!101;UBERON:0001434!8.38e-17!101;UBERON:0000467!2.74e-15!625;UBERON:0000480!5.95e-15!626;UBERON:0000468!7.66e-13!659;UBERON:0000923!3.67e-12!604;UBERON:0005291!3.67e-12!604;UBERON:0006598!3.67e-12!604;UBERON:0002532!3.67e-12!604;UBERON:0002050!6.10e-12!605;UBERON:0005423!6.10e-12!605;UBERON:0002204!1.99e-11!167;UBERON:0000062!2.53e-11!511;UBERON:0000922!2.18e-10!612;UBERON:0007023!3.10e-10!115;UBERON:0000926!1.18e-09!448;UBERON:0004120!1.18e-09!448;UBERON:0006603!1.18e-09!448;UBERON:0003081!1.16e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.01e-24,98;UBERON:0003061,7.01e-24,98;UBERON:0002193,9.14e-24,108;UBERON:0002371,1.16e-22,76;UBERON:0002405,1.40e-20,93;UBERON:0004765,4.67e-19,90;UBERON:0001474,9.59e-19,82;UBERON:0001434,8.92e-17,100;UBERON:0002050,9.43e-13,564;UBERON:0000926,2.11e-12,315;UBERON:0004120,2.11e-12,315;UBERON:0006603,2.11e-12,315;UBERON:0005423,4.43e-12,581;UBERON:0000923,6.58e-12,560;UBERON:0010316,6.58e-12,560;UBERON:0005291,6.58e-12,560;UBERON:0006598,6.58e-12,560;UBERON:0010317,6.58e-12,560;UBERON:0002532,6.58e-12,560;UBERON:0002204,1.95e-11,167;UBERON:0000922,6.92e-11,592;UBERON:0007023,3.31e-10,114;UBERON:0003081,2.48e-09,203 | |||
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| |||
|short_description=p2@SLC31A2 | |||
}} |
Revision as of 02:51, 23 January 2014
Short description: | p2@SLC31A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC31A2_5end |
Coexpression cluster: | C2936_CD14_parotid_salivary_submaxillary_corpus_Mallassezderived_substantia |
Association with transcript: | 0bp_to_ENST00000490809, NM_001860, uc004bgq.2, uc011lxb.1_5end |
EntrezGene: | SLC31A2 |
HGNC: | 11017 |
UniProt: | O15432Q53X94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.26e-30 | 72 |
defensive cell | 7.65e-30 | 48 |
phagocyte | 7.65e-30 | 48 |
macrophage dendritic cell progenitor | 8.90e-29 | 61 |
monopoietic cell | 2.84e-28 | 59 |
monocyte | 2.84e-28 | 59 |
monoblast | 2.84e-28 | 59 |
promonocyte | 2.84e-28 | 59 |
classical monocyte | 1.43e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-26 | 42 |
granulocyte monocyte progenitor cell | 1.82e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.64e-23 | 66 |
myeloid cell | 4.99e-12 | 108 |
common myeloid progenitor | 4.99e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.01e-24 | 98 |
blood island | 7.01e-24 | 98 |
hemolymphoid system | 9.14e-24 | 108 |
bone marrow | 1.16e-22 | 76 |
immune system | 1.40e-20 | 93 |
skeletal element | 4.67e-19 | 90 |
bone element | 9.59e-19 | 82 |
skeletal system | 8.92e-17 | 100 |
embryonic structure | 9.43e-13 | 564 |
mesoderm | 2.11e-12 | 315 |
mesoderm-derived structure | 2.11e-12 | 315 |
presumptive mesoderm | 2.11e-12 | 315 |
developing anatomical structure | 4.43e-12 | 581 |
germ layer | 6.58e-12 | 560 |
germ layer / neural crest | 6.58e-12 | 560 |
embryonic tissue | 6.58e-12 | 560 |
presumptive structure | 6.58e-12 | 560 |
germ layer / neural crest derived structure | 6.58e-12 | 560 |
epiblast (generic) | 6.58e-12 | 560 |
musculoskeletal system | 1.95e-11 | 167 |
embryo | 6.92e-11 | 592 |
adult organism | 3.31e-10 | 114 |
lateral plate mesoderm | 2.48e-09 | 203 |