FFCP PHASE1:Hg19::chr9:114937699..114937726,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UWL2 | |||
|association_with_transcript=-11bp_to_ENST00000374270_5end | |||
|description=CAGE_peak_2_at_SUSD1_5end | |||
|id=chr9:114937699..114937726,- | |||
|ontology_enrichment_celltype=CL:0000557!2.89e-25!71;CL:0000839!8.19e-25!70;CL:0000766!1.43e-24!76;CL:0002194!4.02e-24!63;CL:0000576!4.02e-24!63;CL:0000040!4.02e-24!63;CL:0000559!4.02e-24!63;CL:0002057!8.63e-23!42;CL:0002009!1.51e-22!65;CL:0000860!1.12e-18!45;CL:0000763!1.20e-17!112;CL:0000049!1.20e-17!112;CL:0002078!2.29e-09!44;CL:0000115!2.37e-09!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.74e-19;33!CL:0002057;7.74e-19;33!CL:0000473;1.25e-18;39!CL:0000234;1.25e-18;39!CL:0000576;1.78e-17;48!CL:0000766;2.23e-13;69!CL:0000115;9.96e-09;36!CL:0000763;5.19e-07;100!CL:0002078;9.66e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,9.64e-29,67;CL:0000839,1.99e-28,66;CL:0000766,2.05e-28,72;CL:0002194,3.13e-28,59;CL:0000576,3.13e-28,59;CL:0000040,3.13e-28,59;CL:0000559,3.13e-28,59;CL:0000473,1.25e-26,48;CL:0000234,1.25e-26,48;CL:0002009,6.48e-26,61;CL:0000860,2.91e-23,42;CL:0002057,2.91e-23,42;CL:0000763,7.86e-19,108;CL:0000049,7.86e-19,108;CL:0000115,8.79e-10,36;CL:0002078,9.30e-10,45 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.93e-23!216;UBERON:0002371!2.07e-21!80;UBERON:0002193!2.43e-20!112;UBERON:0002405!5.37e-19!115;UBERON:0001474!6.07e-19!86;UBERON:0002390!1.71e-18!102;UBERON:0003061!1.71e-18!102;UBERON:0004765!3.43e-18!101;UBERON:0001434!3.43e-18!101;UBERON:0000467!2.12e-15!625;UBERON:0000480!3.79e-15!626;UBERON:0000468!1.07e-13!659;UBERON:0000926!6.38e-12!448;UBERON:0004120!6.38e-12!448;UBERON:0006603!6.38e-12!448;UBERON:0002204!6.39e-12!167;UBERON:0000923!1.79e-10!604;UBERON:0005291!1.79e-10!604;UBERON:0006598!1.79e-10!604;UBERON:0002532!1.79e-10!604;UBERON:0002050!1.80e-10!605;UBERON:0005423!1.80e-10!605;UBERON:0000062!2.65e-10!511;UBERON:0000922!6.68e-10!612;UBERON:0000479!1.57e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.87e-24,76;UBERON:0002193,7.98e-23,108;UBERON:0003081,1.12e-22,203;UBERON:0002405,1.88e-22,93;UBERON:0001474,2.33e-21,82;UBERON:0002390,6.24e-21,98;UBERON:0003061,6.24e-21,98;UBERON:0004765,2.90e-18,90;UBERON:0001434,4.29e-18,100;UBERON:0000926,1.67e-15,315;UBERON:0004120,1.67e-15,315;UBERON:0006603,1.67e-15,315;UBERON:0002204,1.36e-11,167;UBERON:0005423,4.54e-11,581;UBERON:0000922,3.87e-10,592;UBERON:0002050,1.42e-09,564;UBERON:0000923,3.40e-09,560;UBERON:0010316,3.40e-09,560;UBERON:0005291,3.40e-09,560;UBERON:0006598,3.40e-09,560;UBERON:0010317,3.40e-09,560;UBERON:0002532,3.40e-09,560;UBERON:0000479,7.61e-07,773 | |||
|phase1_expression=1.99846217197612,2.5692062866918,4.08767771878316,2.00146596706261,3.12872766099101,8.72338524100369,5.06599756336621,0.631719873426831,0.522371256399677,5.16041266653169,1.39560233594486,5.02415155899396,8.70431028153897,1.23766352960047,0.994192127183747,0.672325146451775,4.82155622419182,2.92124036154949,1.46379839637152,3.57051068422685,2.65200898617529,3.76145665773705,3.43483184557268,3.01123735160345,3.89182182743889,0,0.164201178899891,0.0787107813136792,9.4407426443737,5.75744097145819,5.72819656269481,2.75826367343678,0,1.10926203050036,0,0,0.587200878669695,12.7418943962332,10.0272223735071,10.4165217943609,27.5416033315107,14.8991086368731,27.0454346015896,12.5042485350426,10.9584023669755,10.6736986922639,18.3618939155491,8.22335776043652,6.81354015969228,13.8092348314632,13.8326781525714,7.56743135643473,9.99762474136194,6.45484683583826,8.12558919566051,15.6241141820362,11.4620583024295,5.8428105955722,9.48860066349798,11.5534449747394,4.47535988059329,12.8642007072819,10.5715738539465,13.6391920170462,15.6712988859435,14.7520158419696,11.8336227309159,12.5624332628372,9.90817544998383,9.33912032232002,16.9511860737343,7.36555271975129,10.7597211729901,4.43636101255078,5.95292039902122,5.03180749220102,12.3561494261145,8.86043667764887,14.4653028027372,3.70516566863623,3.18266683518544,5.11459630540975,0,1.63841583378639,0,1.28019066769952,0.400395987036012,0,0,2.86216126360609,0,0.587237189370939,1.14681968437569,3.96513985737078,0,1.31692042387539,0,0.393010762749165,0,0.167186495390678,0,0.473447805734733,0,0.557052284425868,0,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0.906474741580529,0,0.34362744548263,0.506039384039006,0.318565414324097,0.651083453856419,0.950452044448374,0.752875595388864,0.76791966692651,0,0.947109008176067,0.821127996921047,1.00803371612366,0.802320587350522,0.434473211648397,0,2.68280343881454,2.9408389224012,5.42158728576849,2.00535164254356,3.47631645505977,1.5905718941022,1.94653948121054,1.41802225746102,2.88248216701333,2.0202000709419,3.07800827419625,0,1.11235332835329,29.8583602162309,30.2985742900725,18.0822826305657,0.953962497221368,0.571994910780128,0.74291500265913,8.14925870203491,0.860234595106124,7.98423153697467,6.78369530308812,3.35599548967925,2.20094433552054,6.26984899610432,3.6178346283706,7.1153252537342,8.03329470635209,5.23678112241891,3.80136052859256,4.39311703586705,4.77962004449629,5.67099363517232,4.19708722935175,2.69435247151404,7.54496919238259,9.19899824795299,2.84779697870439,5.49605231791222,2.63560834872127,0,1.74437620857014,2.48485975847659,1.51956613997496,1.45650098894541,8.89193524321323,3.90135220418193,1.12135520028461,5.33744978648525,1.72667283892012,1.8672662123986,3.3677668017422,1.14423332179421,4.38936540170301,0.576175924479999,4.45210720484214,0.936480230490962,1.1409436430889,0.597794722207204,1.76151747965647,0.809364721840658,0.98315564691574,1.22492502752936,1.84251475967652,4.23635702820638,2.37600571456411,1.7308685049499,2.73048408581408,3.59309070908119,1.17835279767846,2.50237039743928,1.93944880838928,1.75591048352335,2.75839016219118,3.90618953157152,1.81491493056034,2.87023417102179,1.49490172172997,1.69545520927649,5.70173082560364,3.29768093563004,2.31876486041066,4.09457083929498,3.03797398034279,0.876933046450788,2.52433774244115,4.23429533754577,1.13152239773168,9.58525899794859,3.22406714328449,1.86516651541536,4.44499962275583,4.09119180886252,9.75135624322613,0.609868530647977,0.265059536642971,0.232387885739037,0.932949495138334,0.504641701751257,0.36497735907583,1.56449532329816,5.14592750554308,4.14404764057442,1.39310378409594,2.88751792667834,0,0,0,0,0.217879444092406,0,0,0,0,12.548642728619,5.60967095213783,6.9967581926338,4.41026134156626,0,0.982827216677626,2.36315962672562,0,2.95172252503473,5.14703430895577,0.439001141634502,0,0,0.648119116109707,0.977424915930974,0,5.77325368101093,2.43453850447661,6.57488687720601,4.04226053731007,5.55582615091933,3.42457474022277,0.790204397959275,0,17.97384144438,7.95614501473408,13.5254357682743,3.74935335947108,4.03157107677263,2.83550194484773,0.0895585227028483,0,0,5.91195885475132,9.94947304349454,8.70778085271243,5.6206781832615,8.58448547299384,0.126995788584338,2.29193055334967,1.17217447210047,0,0.411309970813294,0,1.14330573052231,1.79409734952577,3.05172048183296,0.66004457238855,1.80980402060889,3.57656445851882,0.845302752556,1.06375246633948,3.12022310734098,1.02882949704857,1.41849132023278,1.3321108950805,1.57275793023962,3.25572963234866,4.93944202068461,2.60588947434988,1.06617584622764,0.791951872933429,8.741741934728,6.97226766880235,9.09754219756719,4.86495122564762,29.6331683944955,8.43335757932127,1.91699884393266,2.29723871668228,1.42636905040718,1.88215698667853,1.2328579353023,3.40215830155802,0.336255431980582,3.34952292343276,1.07813787429759,2.56686072559497,1.77866236955724,1.30139853857622,0.773288812777695,2.01019518401218,0,0.749007023947182,0,2.90090859405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| |||
|short_description=p2@SUSD1 | |||
}} |
Revision as of 02:49, 23 January 2014
Short description: | p2@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000374270_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 9.64e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.99e-28 | 66 |
myeloid leukocyte | 2.05e-28 | 72 |
monopoietic cell | 3.13e-28 | 59 |
monocyte | 3.13e-28 | 59 |
monoblast | 3.13e-28 | 59 |
promonocyte | 3.13e-28 | 59 |
defensive cell | 1.25e-26 | 48 |
phagocyte | 1.25e-26 | 48 |
macrophage dendritic cell progenitor | 6.48e-26 | 61 |
classical monocyte | 2.91e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.91e-23 | 42 |
myeloid cell | 7.86e-19 | 108 |
common myeloid progenitor | 7.86e-19 | 108 |
endothelial cell | 8.79e-10 | 36 |
meso-epithelial cell | 9.30e-10 | 45 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.87e-24 | 76 |
hemolymphoid system | 7.98e-23 | 108 |
lateral plate mesoderm | 1.12e-22 | 203 |
immune system | 1.88e-22 | 93 |
bone element | 2.33e-21 | 82 |
hematopoietic system | 6.24e-21 | 98 |
blood island | 6.24e-21 | 98 |
skeletal element | 2.90e-18 | 90 |
skeletal system | 4.29e-18 | 100 |
mesoderm | 1.67e-15 | 315 |
mesoderm-derived structure | 1.67e-15 | 315 |
presumptive mesoderm | 1.67e-15 | 315 |
musculoskeletal system | 1.36e-11 | 167 |
developing anatomical structure | 4.54e-11 | 581 |
embryo | 3.87e-10 | 592 |
embryonic structure | 1.42e-09 | 564 |
germ layer | 3.40e-09 | 560 |
germ layer / neural crest | 3.40e-09 | 560 |
embryonic tissue | 3.40e-09 | 560 |
presumptive structure | 3.40e-09 | 560 |
germ layer / neural crest derived structure | 3.40e-09 | 560 |
epiblast (generic) | 3.40e-09 | 560 |
tissue | 7.61e-07 | 773 |