FFCP PHASE1:Hg19::chr9:114937543..114937559,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=strong | |||
|UniProt=F8WAQ1,Q6UWL2 | |||
|association_with_transcript=0bp_to_ENST00000374263,ENST00000374264,NM_022486,uc004bfu.2,uc010mui.2,uc010muj.2_5end | |||
|description=CAGE_peak_3_at_SUSD1_5end | |||
|id=chr9:114937543..114937559,- | |||
|ontology_enrichment_celltype=CL:0000763!2.29e-14!112;CL:0000049!2.29e-14!112;CL:0000037!1.87e-11!172;CL:0000566!1.87e-11!172;CL:0000766!3.82e-11!76;CL:0000988!8.61e-11!182;CL:0002032!3.05e-10!165;CL:0000837!3.05e-10!165;CL:0000839!2.53e-09!70;CL:0000557!2.80e-08!71;CL:0000860!6.65e-08!45;CL:0002057!1.69e-07!42;CL:0002194!3.13e-07!63;CL:0000576!3.13e-07!63;CL:0000040!3.13e-07!63;CL:0000559!3.13e-07!63;CL:0000738!8.31e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.11e-15,108;CL:0000049,1.11e-15,108;CL:0000037,2.82e-13,168;CL:0002032,3.75e-12,161;CL:0000837,3.75e-12,161;CL:0000988,4.16e-12,177;CL:0000766,5.49e-11,72;CL:0000839,4.07e-09,66;CL:0000860,8.92e-09,42;CL:0002057,8.92e-09,42;CL:0000557,1.95e-08,67;CL:0000738,7.85e-08,136;CL:0000473,2.37e-07,48;CL:0000234,2.37e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.67e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-08!102;UBERON:0003061!1.19e-08!102;UBERON:0002193!3.06e-07!112;UBERON:0000160!6.96e-07!27 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.96e-09,98;UBERON:0003061,4.96e-09,98;UBERON:0002193,3.29e-07,108;UBERON:0002371,8.60e-07,76 | |||
|phase1_expression=0.181678379270557,0.642301571672949,1.12763523276777,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0.261185628199839,1.72013755551056,2.09340350391728,1.74753097704138,0.791300934685361,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0.940364164434263,1.14494394852423,0.547497700291537,0.87879847716362,0.0764134057479513,0,0,6.68719270643137,4.22212337906934,1.70297735647684,0,0.30120591877825,0.739508020333575,0,0,0.587200878669695,3.32397245119126,4.01088894940283,3.25516306073778,1.79132379391939,0.647787332037959,2.31818010870768,3.05336301437086,4.53451132426571,4.36651310138069,1.62700325833979,2.05583944010913,0.309706370895104,1.1507695692886,1.5369642391746,1.41889337933151,1.72372840368309,0,1.35426486594342,3.9530891303947,3.0019676506363,1.12361742222542,3.36692281607993,2.24650318953266,3.19668562899521,0.659702600373432,2.19410023383795,2.55734850319616,1.16083695451434,1.13477044938228,1.24564449799115,1.25624332628372,1.0429658368404,1.73751075764093,1.21079900526674,1.47311054395026,0.316462387440884,1.05627643155971,1.70083439972035,2.72556239160889,0.673971786878971,0.450530678524519,1.28580469357664,3.13514018115373,1.79025009479181,2.37463399894024,1.75996244461323,0.546138611262131,0.889509253863555,0,0.800791974072025,0,0,0,2.27685187643779,1.17447437874188,0.382273228125229,2.64342657158052,7.8471198817415,1.58030450865046,0.393419540227666,1.17903228824749,1.02800749499755,1.00311897234407,1.30368906653436,0.473447805734733,0,2.00538822393312,0,0.443067789167242,0.270803863765016,1.15282187753108,2.21100890851793,1.15106533222573,1.10540007114339,0.869409257205157,0,0.535081656179426,0,2.60611488204402,0,0,0.506039384039006,0.637130828648193,2.60433381542567,1.90090408889675,1.05402583354441,2.17577238962511,4.99722906209383,2.13099526839615,1.64225599384209,2.01606743224732,3.7441627409691,2.17236605824198,0,2.01210257911091,2.42938867502708,0.722878304769133,0.50133791063589,0.579386075843295,0,0,0.661743720148475,0.443458794925128,1.31752178539689,0.851363990735132,0.364295288292542,0,2.92092654289215,1.0447784237956,0.930705723632056,2.14641561874808,2.85997455390064,1.85728750664782,1.59009925893364,0,0.694281003215189,3.39184765154406,1.67799774483962,1.6507082516404,0.626984899610432,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0,1.22031028774085,0,0,0.625098097988558,1.12264686313085,1.80178368773316,1.53316637465883,0.949265659568129,0.366403487860815,1.31780417436063,3.87780264148325,0,0,1.13967460498122,0.529636723252875,1.14734648299525,1.41867352879343,1.12135520028461,4.2699598291882,1.2333377420858,0.311211035399766,1.88594940897563,1.14423332179421,0.756787138224657,0.576175924479999,1.17160715916898,0.312160076830321,0,0.298897361103602,0.23486899728753,0.647491777472526,0.140450806702248,0,0.122834317311768,0.723280468230358,0,0,0.910161361938026,0,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0.751190294532984,1.02088964844019,0.358779271377724,0.213557388818567,0.847727604638247,1.80054657650641,0.618315175430633,0,0.930584281657949,0.843881661206331,0.389748020644795,0.252433774244115,0.460249493211497,0.323292113637624,0,0.604512589365842,0.169560592310488,0.57978255948989,0.818238361772504,0.286804595389004,0.365921118388786,0.265059536642971,0.232387885739037,0.518305275076852,0,0,0,0,0,0,0,0.591534000199219,0.674338760312407,0,0.330881918197182,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0,1.4763109092493,0,3.7041661019826,1.47008711385542,0,0.982827216677626,1.18157981336281,0.882926198829301,4.42758378755209,1.20097467208968,0.109750285408626,0,0,0.0925884451585296,1.3032332212413,0,0,0.231860809950154,2.58299127318808,0.721832238805369,0.462985512576611,0,0.790204397959275,0,0.984868024349589,0.936017060556951,1.78357394746474,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,9.85326475791887,13.9997010081029,2.69526550203004,1.72943944100354,3.1560608356595,0.253991577168676,0.763976851116555,1.17217447210047,0,0,0,0,0.336393253036082,0.87192013766656,0.07333828582095,0.904902010304444,0,0.845302752556,0.26593811658487,3.12022310734098,0,2.83698264046557,0,0.857867961948885,0,1.64648067356154,0,1.77695974371273,0.791951872933429,3.01439377059586,8.71533458600294,6.09835246210548,0,1.00451418286425,0,0.718874566474748,0,2.85273810081437,0.144781306667579,0.61642896765115,0.537182889719687,3.47463946379935,3.34952292343276,3.23441362289276,4.74869234235069,0.508189248444927,0,0,0,1.27587750330633,0.749007023947182,2.99161459204025,3.31532410748828,0.24538298343828,0,0.271265023699736,1.03985430765404,0.178428988797162,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0.195801157462741,1.02943027143257,1.86091223510599,3.23571301227925,4.16237475433433,0.606255142892519,0,0.30239029332968,0.496215615637554,0.61384789315225,0.56132018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| |||
|short_description=p3@SUSD1 | |||
}} |
Revision as of 02:49, 23 January 2014
Short description: | p3@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374263, ENST00000374264, NM_022486, uc004bfu.2, uc010mui.2, uc010muj.2_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | F8WAQ1Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.11e-15 | 108 |
common myeloid progenitor | 1.11e-15 | 108 |
hematopoietic stem cell | 2.82e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.75e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-12 | 161 |
hematopoietic cell | 4.16e-12 | 177 |
myeloid leukocyte | 5.49e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.07e-09 | 66 |
classical monocyte | 8.92e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.92e-09 | 42 |
granulocyte monocyte progenitor cell | 1.95e-08 | 67 |
leukocyte | 7.85e-08 | 136 |
defensive cell | 2.37e-07 | 48 |
phagocyte | 2.37e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.96e-09 | 98 |
blood island | 4.96e-09 | 98 |
hemolymphoid system | 3.29e-07 | 108 |
bone marrow | 8.60e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.67e-07 | 8 |