FFCP PHASE1:Hg19::chr9:112191244..112191257,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9655 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z3V3,P26045,Q8N4S3,B7ZA03 | |||
|association_with_transcript=65bp_to_NM_001145371,NM_001145372,uc011lwe.1,uc011lwf.1_5end | |||
|coexpression_cluster_id=C1296 | |||
|description=CAGE_peak_4_at_PTPN3_5end | |||
|id=chr9:112191244..112191257,- | |||
|ontology_enrichment_celltype=CL:0002127!4.46e-10!1;CL:0000914!4.46e-10!1;CL:0000911!4.46e-10!1;CL:0000814!4.46e-10!1;CL:0002042!4.46e-10!1;CL:0002039!4.46e-10!1;CL:0002040!4.46e-10!1;CL:0002041!4.46e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.67e-23;1!CL:0000911;1.67e-23;1!CL:0000814;1.67e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.67e-23,1;CL:0000914,1.67e-23,1;CL:0000911,1.67e-23,1;CL:0000814,1.67e-23,1;CL:0002042,1.67e-23,1;CL:0002039,1.67e-23,1;CL:0002040,1.67e-23,1;CL:0002041,1.67e-23,1;CL:0000893,1.85e-12,2;CL:0002489,1.85e-12,2;CL:0000809,1.85e-12,2;CL:0000808,1.85e-12,2;CL:0000894,1.85e-12,2;CL:0000806,1.85e-12,2;CL:0000807,1.85e-12,2;CL:0000805,1.85e-12,2;CL:0002425,1.85e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.34e-23;1!UBERON:0010226;4.10e-23;1!CL:0002425;1.85e-12;2 | |||
|ontology_enrichment_disease=DOID:114!3.45e-18!2;DOID:178!6.88e-10!1;DOID:326!6.88e-10!1;DOID:3978!6.88e-10!1;DOID:3394!6.88e-10!1;DOID:5844!6.88e-10!1;DOID:1287!1.49e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.53e-44;2!DOID:178;5.13e-23;1!DOID:326;5.13e-23;1!DOID:3978;5.13e-23;1!DOID:3394;5.13e-23;1!DOID:5844;5.13e-23;1!DOID:1287;7.18e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.53e-44,2;DOID:178,5.13e-23,1;DOID:326,5.13e-23,1;DOID:3978,5.13e-23,1;DOID:3394,5.13e-23,1;DOID:5844,5.13e-23,1;DOID:1287,7.18e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0001897!3.16e-18!2;UBERON:0007023!8.09e-16!115;UBERON:0001894!1.02e-11!7;UBERON:0006222!1.02e-11!7;UBERON:0002346!4.17e-11!90;UBERON:0007100!7.27e-11!27;UBERON:0002336!5.79e-10!1;UBERON:0001018!5.79e-10!1;UBERON:0002473!5.79e-10!1;UBERON:0005340!5.79e-10!1;UBERON:0002316!5.79e-10!1;UBERON:0003544!5.79e-10!1;UBERON:0001020!5.79e-10!1;UBERON:0005970!5.79e-10!1;UBERON:0002437!5.79e-10!1;UBERON:0002084!6.31e-10!1;UBERON:0002082!6.31e-10!1;UBERON:0004706!6.31e-10!1;UBERON:0002146!7.50e-10!1;UBERON:0005623!7.50e-10!1;UBERON:0003075!9.00e-10!86;UBERON:0007284!9.00e-10!86;UBERON:0001882!1.06e-09!1;UBERON:0005403!1.06e-09!1;UBERON:0005743!1.29e-09!86;UBERON:0003056!1.30e-09!61;UBERON:0002780!4.74e-09!41;UBERON:0001890!4.74e-09!41;UBERON:0006240!4.74e-09!41;UBERON:0003080!8.03e-09!42;UBERON:0000073!1.48e-08!94;UBERON:0001016!1.48e-08!94;UBERON:0000955!3.40e-08!69;UBERON:0006238!3.40e-08!69;UBERON:0001049!3.62e-08!57;UBERON:0005068!3.62e-08!57;UBERON:0006241!3.62e-08!57;UBERON:0007135!3.62e-08!57;UBERON:0002616!7.34e-08!59;UBERON:0000966!1.55e-07!5;UBERON:0005388!1.55e-07!5;UBERON:0001802!1.55e-07!5;UBERON:0000153!3.97e-07!129;UBERON:0007811!3.97e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.28e-23;1!UBERON:0011215;3.28e-23;1!UBERON:0001018;3.28e-23;1!UBERON:0002473;3.28e-23;1!UBERON:0005340;3.28e-23;1!UBERON:0003544;3.28e-23;1!UBERON:0005970;3.28e-23;1!UBERON:0002316;3.28e-23;1!UBERON:0001020;3.28e-23;1!UBERON:0002437;3.28e-23;1!UBERON:0002084;4.10e-23;1!UBERON:0002082;4.10e-23;1!UBERON:0002146;6.40e-23;1!UBERON:0005623;6.40e-23;1!UBERON:0007100;5.06e-22;25!UBERON:0001894;8.94e-14;7!UBERON:0001897;1.48e-12;2!UBERON:0010225;1.48e-12;2!UBERON:0005162;2.59e-12;2!UBERON:0000122;2.59e-12;2!UBERON:0004151;1.30e-08;3!UBERON:0003978;1.51e-08;3!UBERON:0000946;1.51e-08;3!UBERON:0002784;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,3.28e-23,1;UBERON:0011215,3.28e-23,1;UBERON:0001018,3.28e-23,1;UBERON:0002473,3.28e-23,1;UBERON:0005340,3.28e-23,1;UBERON:0003544,3.28e-23,1;UBERON:0005970,3.28e-23,1;UBERON:0002316,3.28e-23,1;UBERON:0001020,3.28e-23,1;UBERON:0002437,3.28e-23,1;UBERON:0002084,4.10e-23,1;UBERON:0002082,4.10e-23,1;UBERON:0010226,4.10e-23,1;UBERON:0002146,6.40e-23,1;UBERON:0005623,6.40e-23,1;UBERON:0007100,2.05e-20,27;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0001897,1.48e-12,2;UBERON:0010225,1.48e-12,2;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0007023,3.69e-12,114;UBERON:0004151,1.30e-08,3;UBERON:0003978,1.51e-08,3;UBERON:0009751,1.51e-08,3;UBERON:0000946,1.51e-08,3;UBERON:0002523,1.51e-08,3;UBERON:0005983,1.51e-08,3;UBERON:0002165,1.51e-08,3;UBERON:0002062,1.51e-08,3;UBERON:0007280,1.51e-08,3;UBERON:0003103,3.19e-08,68;UBERON:0002784,6.50e-07,4;UBERON:0002370,7.27e-07,4;UBERON:0005058,7.27e-07,4;UBERON:0009113,7.27e-07,4;UBERON:0003295,7.27e-07,4;UBERON:0005562,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8985578551974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9876838405701,0,22.0208578981819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,1.60412296808179,0,2.59582700648688,8.58452096273142,5.35611497860494,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1917609415985,0.930896962757057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@PTPN3 | |||
}} |
Revision as of 02:41, 23 January 2014
Short description: | p4@PTPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPN3_5end |
Coexpression cluster: | C1296_thalamus_diencephalon_NK_corpus_heart_testis_left |
Association with transcript: | 65bp_to_NM_001145371, NM_001145372, uc011lwe.1, uc011lwf.1_5end |
EntrezGene: | PTPN3 |
HGNC: | 9655 |
UniProt: | B7Z3V3P26045Q8N4S3B7ZA03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.67e-23 | 1 |
immature NK T cell | 1.67e-23 | 1 |
effector T cell | 1.67e-23 | 1 |
mature NK T cell | 1.67e-23 | 1 |
immature NK T cell stage IV | 1.67e-23 | 1 |
immature NK T cell stage I | 1.67e-23 | 1 |
immature NK T cell stage II | 1.67e-23 | 1 |
immature NK T cell stage III | 1.67e-23 | 1 |
thymocyte | 1.85e-12 | 2 |
double negative thymocyte | 1.85e-12 | 2 |
double-positive, alpha-beta thymocyte | 1.85e-12 | 2 |
DN4 thymocyte | 1.85e-12 | 2 |
DN1 thymic pro-T cell | 1.85e-12 | 2 |
DN2 thymocyte | 1.85e-12 | 2 |
DN3 thymocyte | 1.85e-12 | 2 |
immature single positive thymocyte | 1.85e-12 | 2 |
early T lineage precursor | 1.85e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.53e-44 | 2 |
vascular disease | 5.13e-23 | 1 |
ischemia | 5.13e-23 | 1 |
extrinsic cardiomyopathy | 5.13e-23 | 1 |
myocardial ischemia | 5.13e-23 | 1 |
myocardial infarction | 5.13e-23 | 1 |
cardiovascular system disease | 7.18e-23 | 4 |