FFCP PHASE1:Hg19::chr9:92040335..92040353,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1125 | |||
|description=CAGE_peak_at_chr9:92040335..92040353,- | |||
|id=chr9:92040335..92040353,- | |||
|ontology_enrichment_celltype=CL:0002057!9.84e-74!42;CL:0000860!2.98e-68!45;CL:0002194!1.77e-45!63;CL:0000576!1.77e-45!63;CL:0000040!1.77e-45!63;CL:0000559!1.77e-45!63;CL:0000766!1.66e-44!76;CL:0002009!7.61e-44!65;CL:0000839!3.64e-40!70;CL:0000557!1.72e-39!71;CL:0000763!3.03e-31!112;CL:0000049!3.03e-31!112;CL:0002087!1.23e-30!119;CL:0000738!9.68e-30!140;CL:0002031!1.41e-25!124;CL:0000037!3.14e-25!172;CL:0000566!3.14e-25!172;CL:0002032!8.91e-24!165;CL:0000837!8.91e-24!165;CL:0000988!2.77e-23!182;CL:0000134!5.21e-11!358;CL:0000767!1.15e-10!3;CL:0002320!1.38e-10!365;CL:0000219!4.19e-09!390;CL:0000034!1.45e-08!444;CL:0000048!1.49e-08!430;CL:0000723!2.80e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.22e-101;33!CL:0002057;3.22e-101;33!CL:0000473;4.25e-67;39!CL:0000234;4.25e-67;39!CL:0000576;2.43e-52;48!CL:0000766;2.02e-33;69!CL:0002087;8.66e-16;104!CL:0000763;1.75e-14;100!CL:0000738;1.72e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.22e-101,42;CL:0002057,2.22e-101,42;CL:0000473,2.91e-88,48;CL:0000234,2.91e-88,48;CL:0002194,6.87e-70,59;CL:0000576,6.87e-70,59;CL:0000040,6.87e-70,59;CL:0000559,6.87e-70,59;CL:0002009,1.62e-67,61;CL:0000839,3.31e-62,66;CL:0000766,8.73e-62,72;CL:0000557,3.08e-61,67;CL:0000763,3.83e-40,108;CL:0000049,3.83e-40,108;CL:0002087,1.16e-37,115;CL:0002031,6.02e-36,120;CL:0000738,4.36e-34,136;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.31e-68;42!CL:0000049;1.73e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.58e-34!80;UBERON:0001474!3.06e-31!86;UBERON:0002193!4.49e-29!112;UBERON:0002390!7.90e-29!102;UBERON:0003061!7.90e-29!102;UBERON:0004765!1.98e-25!101;UBERON:0001434!1.98e-25!101;UBERON:0002405!1.37e-24!115;UBERON:0003081!9.95e-17!216;UBERON:0002204!2.63e-13!167;UBERON:0002384!5.17e-10!375;UBERON:0001987!1.06e-07!4;UBERON:0004340!1.06e-07!4;UBERON:0003124!2.35e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-53,76;UBERON:0001474,1.67e-49,82;UBERON:0004765,7.96e-45,90;UBERON:0002405,2.82e-43,93;UBERON:0002390,6.70e-41,98;UBERON:0003061,6.70e-41,98;UBERON:0001434,5.13e-40,100;UBERON:0002193,8.40e-37,108;UBERON:0002204,1.59e-22,167;UBERON:0003081,7.45e-18,203;UBERON:0000926,4.38e-10,315;UBERON:0004120,4.38e-10,315;UBERON:0006603,4.38e-10,315;UBERON:0002384,5.43e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.10799081706375,2.00544447470142,0.868043482863407,0,0,0,0.290796477559129,0,0,0.697287110717054,2.87817521615278,2.47765096716083,2.8769239232215,3.58624989140741,2.36482229888585,1.03423704220986,0.645484683583826,12.1883837934908,0.941211697713023,0.818718450173537,1.79778787556068,2.44867113896722,3.20929027076094,5.75403413219137,0.659702600373432,1.39624560335142,3.40979800426155,6.67481248845743,7.94339314567596,2.4912889959823,1.7587406567972,4.17186334736161,3.47502151528187,4.23779651843358,9.57521853567668,5.69632297393592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0.111308705022906,15.6563680515422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:92040335..92040353,- | |||
}} |
Revision as of 02:05, 23 January 2014
Short description: | p@chr9:92040335..92040353, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:92040335..92040353, - |
Coexpression cluster: | C1125_anaplastic_CD14_CD14CD16_acute_Macrophage_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.22e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-101 | 42 |
defensive cell | 2.91e-88 | 48 |
phagocyte | 2.91e-88 | 48 |
monopoietic cell | 6.87e-70 | 59 |
monocyte | 6.87e-70 | 59 |
monoblast | 6.87e-70 | 59 |
promonocyte | 6.87e-70 | 59 |
macrophage dendritic cell progenitor | 1.62e-67 | 61 |
myeloid lineage restricted progenitor cell | 3.31e-62 | 66 |
myeloid leukocyte | 8.73e-62 | 72 |
granulocyte monocyte progenitor cell | 3.08e-61 | 67 |
myeloid cell | 3.83e-40 | 108 |
common myeloid progenitor | 3.83e-40 | 108 |
nongranular leukocyte | 1.16e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.02e-36 | 120 |
leukocyte | 4.36e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-53 | 76 |
bone element | 1.67e-49 | 82 |
skeletal element | 7.96e-45 | 90 |
immune system | 2.82e-43 | 93 |
hematopoietic system | 6.70e-41 | 98 |
blood island | 6.70e-41 | 98 |
skeletal system | 5.13e-40 | 100 |
hemolymphoid system | 8.40e-37 | 108 |
musculoskeletal system | 1.59e-22 | 167 |
lateral plate mesoderm | 7.45e-18 | 203 |
mesoderm | 4.38e-10 | 315 |
mesoderm-derived structure | 4.38e-10 | 315 |
presumptive mesoderm | 4.38e-10 | 315 |
connective tissue | 5.43e-10 | 371 |