FFCP PHASE1:Hg19::chr9:79267645..79267656,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=158471 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25209 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-180bp_to_ENST00000424866_5end | |||
|description=CAGE_peak_19_at_PRUNE2_5end | |||
|id=chr9:79267645..79267656,- | |||
|ontology_enrichment_celltype=CL:0000135!5.02e-10!3;CL:0000386!5.02e-10!3;CL:0000388!5.02e-10!3;CL:0000214!7.81e-10!3;CL:0002580!1.26e-09!3;CL:0002579!1.26e-09!3;CL:0002334!7.53e-09!12;CL:0000153!4.32e-07!9;CL:0000447!4.32e-07!9;CL:0000057!6.17e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002617;7.05e-18;2!CL:0002615;2.19e-12;3!CL:0000135;2.89e-12;3!CL:0000515;2.89e-12;3!CL:0000214;2.89e-12;3!CL:0000388;2.89e-12;3!CL:0000136;3.21e-11;13!CL:0000056;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,7.67e-18,2;CL:0002615,2.07e-12,3;CL:0000135,2.59e-12,3;CL:0000388,2.59e-12,3;CL:0000214,2.89e-12,3;CL:0000136,7.41e-10,15;CL:0000515,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.84e-34;1!CL:0000515;1.57e-09;4 | |||
|ontology_enrichment_disease=DOID:3371!1.04e-07!1;DOID:4549!1.04e-07!1;DOID:5861!1.04e-07!1;DOID:6496!1.04e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.12e-13!12;UBERON:0000042!1.12e-13!12;UBERON:0003688!1.59e-10!6;UBERON:0002358!1.59e-10!6;UBERON:0003684!1.59e-10!6;UBERON:0001178!1.59e-10!6;UBERON:0000043!5.02e-10!3;UBERON:0006915!7.81e-10!3;UBERON:0002018!7.81e-10!3;UBERON:0002217!7.81e-10!3;UBERON:0007616!7.81e-10!3;UBERON:0003978!8.91e-10!3;UBERON:0009751!8.91e-10!3;UBERON:0000946!8.91e-10!3;UBERON:0002523!8.91e-10!3;UBERON:0005983!8.91e-10!3;UBERON:0002165!8.91e-10!3;UBERON:0002062!8.91e-10!3;UBERON:0007280!8.91e-10!3;UBERON:0002363!2.70e-08!1;UBERON:0007647!2.70e-08!1;UBERON:0010115!2.70e-08!1;UBERON:0000989!4.07e-08!1;UBERON:0008811!4.07e-08!1;UBERON:0006258!4.07e-08!1;UBERON:0005876!4.07e-08!1;UBERON:0004874!4.07e-08!1;UBERON:0002134!4.99e-08!1;UBERON:0005208!4.99e-08!1;UBERON:0005946!4.99e-08!1;UBERON:0005965!4.99e-08!1;UBERON:0002078!4.99e-08!1;UBERON:0002146!6.97e-08!1;UBERON:0005623!6.97e-08!1;UBERON:0004923!8.31e-08!57;UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.84e-34;1!UBERON:0002360;5.48e-18;2!UBERON:0000094;5.48e-18;2!UBERON:0010743;5.48e-18;2!UBERON:0004457;1.17e-15;9!UBERON:0000042;1.17e-15;9!UBERON:0007846;2.89e-12;3!UBERON:0006915;2.89e-12;3!UBERON:0007616;2.89e-12;3!UBERON:0000043;2.89e-12;3!UBERON:0007845;2.89e-12;3!UBERON:0002217;2.89e-12;3!UBERON:0002018;2.89e-12;3!UBERON:0003688;7.80e-07;6!UBERON:0002358;7.80e-07;6!UBERON:0003684;7.80e-07;6!UBERON:0001178;7.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.84e-34,1;UBERON:0007645,1.84e-34,1;UBERON:0007647,1.84e-34,1;UBERON:0010115,1.84e-34,1;UBERON:0002360,5.48e-18,2;UBERON:0000094,5.48e-18,2;UBERON:0010743,5.48e-18,2;UBERON:0007846,2.59e-12,3;UBERON:0000043,2.59e-12,3;UBERON:0007845,2.59e-12,3;UBERON:0006915,2.89e-12,3;UBERON:0007616,2.89e-12,3;UBERON:0002217,2.89e-12,3;UBERON:0002018,2.89e-12,3;UBERON:0004457,5.08e-12,12;UBERON:0000042,5.08e-12,12;UBERON:0003688,7.58e-07,6;UBERON:0002358,7.58e-07,6;UBERON:0003684,7.58e-07,6;UBERON:0001178,7.58e-07,6 | |||
|phase1_expression=2.18014055124668,0,2.96004248601539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.640695746278505,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98075451659474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@PRUNE2 | |||
}} |
Revision as of 01:47, 23 January 2014
Short description: | p19@PRUNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_19_at_PRUNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -180bp_to_ENST00000424866_5end |
EntrezGene: | PRUNE2 |
HGNC: | 25209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 7.67e-18 | 2 |
adipocyte of omentum tissue | 2.07e-12 | 3 |
fibrocyte | 2.59e-12 | 3 |
tendon cell | 2.59e-12 | 3 |
synovial cell | 2.89e-12 | 3 |
fat cell | 7.41e-10 | 15 |
skeletal muscle myoblast | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.84e-34 | 1 |
future meninx | 1.84e-34 | 1 |
ectomeninx | 1.84e-34 | 1 |
future dura mater | 1.84e-34 | 1 |
meninx | 5.48e-18 | 2 |
membrane organ | 5.48e-18 | 2 |
meningeal cluster | 5.48e-18 | 2 |
dense regular connective tissue | 2.59e-12 | 3 |
tendon | 2.59e-12 | 3 |
regular connective tissue | 2.59e-12 | 3 |
stratified squamous epithelium | 2.89e-12 | 3 |
layer of synovial tissue | 2.89e-12 | 3 |
synovial joint | 2.89e-12 | 3 |
synovial membrane of synovial joint | 2.89e-12 | 3 |
cavity lining | 5.08e-12 | 12 |
serous membrane | 5.08e-12 | 12 |
omentum | 7.58e-07 | 6 |
peritoneum | 7.58e-07 | 6 |
abdominal cavity | 7.58e-07 | 6 |
visceral peritoneum | 7.58e-07 | 6 |