FFCP PHASE1:Hg19::chr9:77257481..77257492,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr9:77257481..77257492,- | |||
|id=chr9:77257481..77257492,- | |||
|ontology_enrichment_celltype=CL:0000322!1.98e-14!3;CL:0000167!8.62e-12!1;CL:0000164!8.62e-12!1;CL:0000502!8.62e-12!1;CL:0000172!8.62e-12!1;CL:0000173!8.62e-12!1;CL:0002351!8.62e-12!1;CL:0002553!9.57e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1!CL:0002553;2.58e-34;1!CL:0000047;9.86e-18;2!CL:0000322;2.74e-12;3!CL:0000082;5.83e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1;CL:0002553,2.58e-34,1;CL:0000322,3.24e-12,3;CL:0000082,6.15e-08,19 | |||
|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1!UBERON:0008947;5.32e-11;29!UBERON:0001041;1.17e-10;30 | |||
|ontology_enrichment_disease=DOID:4430!8.62e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:3910;9.86e-18;2!DOID:1324;7.92e-10;15!DOID:0050615;2.83e-09;16!DOID:3908;6.78e-08;5!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:3910,1.27e-17,2;DOID:1324,8.46e-10,15;DOID:0050615,3.01e-09,16;DOID:3908,7.49e-08,5;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002048!4.14e-16!22;UBERON:0000117!4.14e-16!22;UBERON:0000171!4.14e-16!22;UBERON:0000170!4.14e-16!22;UBERON:0005597!4.14e-16!22;UBERON:0000118!4.14e-16!22;UBERON:0004821!1.98e-14!3;UBERON:0003215!1.98e-14!3;UBERON:0002299!1.98e-14!3;UBERON:0006524!1.98e-14!3;UBERON:0008874!1.98e-14!3;UBERON:0002169!1.98e-14!3;UBERON:0004894!1.98e-14!3;UBERON:0005178!7.47e-14!34;UBERON:0002224!7.47e-14!34;UBERON:0005181!1.94e-13!35;UBERON:0005153!1.37e-12!37;UBERON:0008947!2.53e-12!38;UBERON:0003258!2.53e-12!38;UBERON:0002171!1.97e-11!1;UBERON:0006518!1.97e-11!1;UBERON:0008949!1.97e-11!1;UBERON:0000101!1.97e-11!1;UBERON:0002167!1.97e-11!1;UBERON:0005157!6.09e-09!51;UBERON:0000915!8.13e-09!52;UBERON:0000065!1.23e-08!53;UBERON:0007196!4.82e-07!14;UBERON:0001558!4.82e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0002048;2.99e-14;22!UBERON:0000117;2.99e-14;22!UBERON:0000171;2.99e-14;22!UBERON:0000170;2.99e-14;22!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0009856;1.50e-09;4!UBERON:0004802;5.83e-08;19!UBERON:0000115;5.83e-08;19!UBERON:0005178;1.76e-07;34!UBERON:0002224;1.76e-07;34!UBERON:0004807;5.32e-07;22!UBERON:0005181;7.58e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0002048,3.13e-14,22;UBERON:0000117,3.13e-14,22;UBERON:0000171,3.13e-14,22;UBERON:0000170,3.13e-14,22;UBERON:0005597,3.13e-14,22;UBERON:0000118,3.13e-14,22;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0005178,1.77e-09,34;UBERON:0002224,1.77e-09,34;UBERON:0005181,3.15e-09,35;UBERON:0005153,9.09e-09,37;UBERON:0008947,1.48e-08,38;UBERON:0003258,1.48e-08,38;UBERON:0004802,6.15e-08,19;UBERON:0000115,6.15e-08,19;UBERON:0005157,4.79e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9699292862723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:77257481..77257492,- | |||
}} |
Revision as of 01:46, 23 January 2014
Short description: | p@chr9:77257481..77257492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:77257481..77257492, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.84e-34 | 1 |
enteroendocrine cell | 1.84e-34 | 1 |
type D enteroendocrine cell | 1.84e-34 | 1 |
somatostatin secreting cell | 1.84e-34 | 1 |
pancreatic D cell | 1.84e-34 | 1 |
progenitor cell of endocrine pancreas | 1.84e-34 | 1 |
lung fibroblast | 2.58e-34 | 1 |
pneumocyte | 3.24e-12 | 3 |
epithelial cell of lung | 6.15e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
lung | 3.13e-14 | 22 |
respiratory tube | 3.13e-14 | 22 |
respiration organ | 3.13e-14 | 22 |
pair of lungs | 3.13e-14 | 22 |
lung primordium | 3.13e-14 | 22 |
lung bud | 3.13e-14 | 22 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
thoracic cavity element | 1.77e-09 | 34 |
thoracic cavity | 1.77e-09 | 34 |
thoracic segment organ | 3.15e-09 | 35 |
epithelial bud | 9.09e-09 | 37 |
respiratory primordium | 1.48e-08 | 38 |
endoderm of foregut | 1.48e-08 | 38 |
respiratory tract epithelium | 6.15e-08 | 19 |
lung epithelium | 6.15e-08 | 19 |
epithelial fold | 4.79e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-34 | 1 |
lung adenocarcinoma | 1.27e-17 | 2 |
lung cancer | 8.46e-10 | 15 |
respiratory system cancer | 3.01e-09 | 16 |
non-small cell lung carcinoma | 7.49e-08 | 5 |
neuroendocrine tumor | 7.17e-07 | 6 |