FFCP PHASE1:Hg19::chr9:37003148..37003152,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=5079 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8619 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-375bp_to_uc011lpt.1,uc011lpu.1,uc011lpv.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_PAX5_5end | |||
|id=chr9:37003148..37003152,- | |||
|ontology_enrichment_celltype=CL:0000945!3.98e-58!24;CL:0000826!3.98e-58!24;CL:0000236!4.05e-38!14;CL:0000542!4.30e-27!53;CL:0000051!4.30e-27!53;CL:0000838!2.79e-25!52;CL:0002087!9.10e-11!119;CL:0002031!5.96e-10!124;CL:0000817!4.18e-09!3;CL:0000738!7.06e-09!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.01e-88;13!CL:0000945;1.67e-83;24!CL:0000542;4.98e-32;53!CL:0000785;1.32e-09;1!CL:0000819;1.32e-09;1!CL:0000817;2.08e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.46e-84,24;CL:0000826,9.46e-84,24;CL:0000236,6.37e-82,14;CL:0000542,2.66e-41,53;CL:0000051,2.66e-41,53;CL:0000838,3.52e-37,52;CL:0002087,3.14e-17,115;CL:0002031,2.44e-14,120;CL:0000738,4.08e-14,136;CL:0000817,7.92e-12,3;CL:0002032,1.86e-11,161;CL:0000837,1.86e-11,161;CL:0000037,7.45e-11,168;CL:0000988,3.79e-10,177;CL:0000819,1.32e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;4.98e-32;53!UBERON:0001045;3.82e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!6.34e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.12e-20;10!DOID:0060073;1.32e-09;1!DOID:8675;1.32e-09;1!DOID:12603;2.08e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.13e-20,10;DOID:0060073,1.32e-09,1;DOID:8675,1.32e-09,1;DOID:12603,1.84e-09,1;DOID:2531,5.78e-07,51;DOID:0060083,5.78e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.47e-10!15;UBERON:0000179!7.47e-10!15;UBERON:0000463!7.47e-10!15;UBERON:0004177!7.29e-09!7;UBERON:0002106!1.38e-08!3;UBERON:0004854!1.38e-08!3;UBERON:0009034!1.38e-08!3;UBERON:0002095!1.38e-08!3;UBERON:0004782!1.38e-08!3;UBERON:0003281!1.38e-08!3;UBERON:0009664!1.38e-08!3;UBERON:0002296!1.38e-08!3;UBERON:0005602!1.38e-08!3;UBERON:0001179!1.38e-08!3;UBERON:0006293!1.38e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.31e-11;3!UBERON:0002372;3.82e-09;1!UBERON:0001154;3.82e-09;1!UBERON:0001153;3.82e-09;1!UBERON:0009854;3.82e-09;1!UBERON:0001961;3.82e-09;1!UBERON:0001744;3.82e-09;1!UBERON:0001042;3.82e-09;1!UBERON:0001735;3.82e-09;1!UBERON:0004177;3.67e-07;5!UBERON:0005057;3.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.01e-11,3;UBERON:0004854,3.01e-11,3;UBERON:0009034,3.01e-11,3;UBERON:0002095,3.01e-11,3;UBERON:0004782,3.01e-11,3;UBERON:0003281,3.01e-11,3;UBERON:0009664,3.01e-11,3;UBERON:0002296,3.01e-11,3;UBERON:0005602,3.01e-11,3;UBERON:0001179,3.01e-11,3;UBERON:0006293,3.01e-11,3;UBERON:0001154,3.25e-09,1;UBERON:0001153,3.25e-09,1;UBERON:0001045,3.25e-09,1;UBERON:0002372,5.28e-09,1;UBERON:0001961,5.28e-09,1;UBERON:0001744,5.28e-09,1;UBERON:0001735,5.28e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,0.985207073399349,0.865818594450472,0,0,0,0,0,0,2.32401601740905,2.27470771979874,0,0,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3197371122926,7.09980194640771,8.89509253863555,1.70692089026603,3.2031678962881,9.77079147922622,8.59358334620321,10.494591299889,3.41527781465669,0.587237189370939,1.91136614062614,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,1.52927441428475,0.569647187174163,0.476463550915578,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,2.9728508020115,2.30830740762312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0.503865495708552,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,4.01400536274465,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0.846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0,0.123935764259002,0,0,1.34064966502131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.467878926924211,0,0,0,0.219881033490858,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,1.03382309777839,0.128915775947154,1.49911733887393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0.112131862580613,0,0,0,0,1.0776328482334,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |||
|short_description=p5@PAX5 | |||
}} |
Revision as of 01:29, 23 January 2014
Short description: | p5@PAX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PAX5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -375bp_to_uc011lpt.1, uc011lpu.1, uc011lpv.1_5end |
EntrezGene: | PAX5 |
HGNC: | 8619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.46e-84 | 24 |
pro-B cell | 9.46e-84 | 24 |
B cell | 6.37e-82 | 14 |
lymphocyte | 2.66e-41 | 53 |
common lymphoid progenitor | 2.66e-41 | 53 |
lymphoid lineage restricted progenitor cell | 3.52e-37 | 52 |
nongranular leukocyte | 3.14e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.44e-14 | 120 |
leukocyte | 4.08e-14 | 136 |
precursor B cell | 7.92e-12 | 3 |
hematopoietic oligopotent progenitor cell | 1.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-11 | 161 |
hematopoietic stem cell | 7.45e-11 | 168 |
hematopoietic cell | 3.79e-10 | 177 |
B-1 B cell | 1.32e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.01e-11 | 3 |
gastrointestinal system mesentery | 3.01e-11 | 3 |
stomach region | 3.01e-11 | 3 |
mesentery | 3.01e-11 | 3 |
gastrointestinal system serosa | 3.01e-11 | 3 |
mesentery of stomach | 3.01e-11 | 3 |
gut mesentery | 3.01e-11 | 3 |
dorsal mesentery | 3.01e-11 | 3 |
dorsal mesogastrium | 3.01e-11 | 3 |
peritoneal cavity | 3.01e-11 | 3 |
spleen primordium | 3.01e-11 | 3 |
vermiform appendix | 3.25e-09 | 1 |
caecum | 3.25e-09 | 1 |
midgut | 3.25e-09 | 1 |
tonsil | 5.28e-09 | 1 |
mucosa-associated lymphoid tissue | 5.28e-09 | 1 |
lymphoid tissue | 5.28e-09 | 1 |
tonsillar ring | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.13e-20 | 10 |
lymphatic system cancer | 1.32e-09 | 1 |
lymphosarcoma | 1.32e-09 | 1 |
acute leukemia | 1.84e-09 | 1 |
hematologic cancer | 5.78e-07 | 51 |
immune system cancer | 5.78e-07 | 51 |