FFCP PHASE1:Hg19::chr9:35490101..35490129,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |||
|association_with_transcript=0bp_to_ENST00000361226_5end | |||
|description=CAGE_peak_3_at_RUSC2_5end | |||
|id=chr9:35490101..35490129,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.92e-20!180;CL:0000222!3.74e-19!119;CL:0000057!1.28e-14!75;CL:0000183!2.46e-11!59;CL:0000192!3.54e-11!42;CL:0000514!3.54e-11!42;CL:0000680!4.13e-11!57;CL:0000056!4.13e-11!57;CL:0000355!4.13e-11!57;CL:0000187!2.77e-10!54;CL:0000359!1.32e-09!32;CL:0000213!5.22e-09!57;CL:0000215!5.22e-09!57;CL:0000393!1.12e-07!60;CL:0000211!1.12e-07!60;CL:0000220!2.04e-07!246;CL:0002321!4.00e-07!248;CL:0002139!7.40e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.82e-09;32!CL:0000192;1.00e-07;43!CL:0000057;2.48e-07;73!CL:0002139;6.33e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.28e-19,121;CL:0000057,3.25e-15,76;CL:0000192,6.96e-11,43;CL:0000514,6.96e-11,43;CL:0000680,1.22e-10,58;CL:0000056,1.22e-10,58;CL:0000355,1.22e-10,58;CL:0000187,8.15e-10,55;CL:0000359,1.02e-09,32;CL:0000213,4.04e-09,58;CL:0000215,4.04e-09,58;CL:0000393,4.00e-07,61;CL:0000211,4.00e-07,61;CL:0002139,6.26e-07,24;CL:0000115,8.96e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.00e-22!79;UBERON:0007798!5.00e-22!79;UBERON:0000055!1.80e-19!69;UBERON:0000119!2.37e-18!312;UBERON:0001981!6.06e-18!60;UBERON:0007500!6.06e-18!60;UBERON:0004537!6.06e-18!60;UBERON:0006965!6.06e-18!60;UBERON:0004872!6.60e-18!84;UBERON:0000483!1.76e-17!309;UBERON:0000468!3.43e-17!659;UBERON:0000467!4.96e-17!625;UBERON:0000480!1.16e-16!626;UBERON:0003914!1.05e-15!118;UBERON:0004111!2.90e-15!241;UBERON:0001009!2.90e-15!113;UBERON:0000475!2.91e-15!365;UBERON:0000477!4.79e-15!286;UBERON:0004290!7.77e-15!70;UBERON:0004535!8.94e-15!110;UBERON:0000914!7.31e-14!83;UBERON:0002329!7.31e-14!83;UBERON:0003077!7.31e-14!83;UBERON:0003059!7.31e-14!83;UBERON:0007282!7.31e-14!83;UBERON:0009618!7.31e-14!83;UBERON:0007285!7.31e-14!83;UBERON:0000025!9.65e-14!194;UBERON:0000490!1.07e-13!138;UBERON:0002385!3.16e-13!63;UBERON:0001015!3.16e-13!63;UBERON:0000383!3.16e-13!63;UBERON:0001134!4.56e-13!61;UBERON:0002036!4.56e-13!61;UBERON:0003082!4.56e-13!61;UBERON:0000481!6.15e-13!347;UBERON:0005256!8.14e-13!143;UBERON:0001637!1.28e-12!42;UBERON:0003509!1.28e-12!42;UBERON:0004572!1.28e-12!42;UBERON:0000486!6.15e-12!82;UBERON:0002100!1.10e-11!216;UBERON:0004573!6.83e-10!33;UBERON:0004571!6.83e-10!33;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!1.50e-09!604;UBERON:0005291!1.50e-09!604;UBERON:0006598!1.50e-09!604;UBERON:0002532!1.50e-09!604;UBERON:0000922!3.57e-09!612;UBERON:0000062!1.06e-07!511;UBERON:0003104!2.16e-07!238;UBERON:0009142!2.16e-07!238;UBERON:0000926!2.26e-07!448;UBERON:0004120!2.26e-07!448;UBERON:0006603!2.26e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;9.56e-10;65!UBERON:0001637;2.00e-09;42!UBERON:0003509;2.00e-09;42!UBERON:0004572;2.00e-09;42!UBERON:0007500;4.89e-09;56!UBERON:0001981;4.89e-09;56!UBERON:0004537;4.89e-09;56!UBERON:0004573;7.13e-09;33!UBERON:0004571;7.13e-09;33!UBERON:0002049;1.70e-08;75!UBERON:0007798;1.70e-08;75!UBERON:0003914;5.39e-07;74 | |||
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| |||
|short_description=p3@RUSC2 | |||
}} |
Revision as of 01:21, 23 January 2014
Short description: | p3@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361226_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.28e-19 | 121 |
fibroblast | 3.25e-15 | 76 |
smooth muscle cell | 6.96e-11 | 43 |
smooth muscle myoblast | 6.96e-11 | 43 |
muscle precursor cell | 1.22e-10 | 58 |
myoblast | 1.22e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-10 | 58 |
muscle cell | 8.15e-10 | 55 |
vascular associated smooth muscle cell | 1.02e-09 | 32 |
lining cell | 4.04e-09 | 58 |
barrier cell | 4.04e-09 | 58 |
electrically responsive cell | 4.00e-07 | 61 |
electrically active cell | 4.00e-07 | 61 |
endothelial cell of vascular tree | 6.26e-07 | 24 |
endothelial cell | 8.96e-07 | 36 |