FFCP PHASE1:Hg19::chr9:33817736..33817749,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19907 | |||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |||
|association_with_transcript=171bp_to_ENST00000263228_5end | |||
|description=CAGE_peak_5_at_UBE2R2_5end | |||
|id=chr9:33817736..33817749,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.15e-13!42;CL:0000766!7.68e-13!76;CL:0000860!2.62e-11!45;CL:0002194!3.20e-10!63;CL:0000576!3.20e-10!63;CL:0000040!3.20e-10!63;CL:0000559!3.20e-10!63;CL:0000839!2.63e-09!70;CL:0002009!4.40e-09!65;CL:0000557!1.59e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.82e-11;33!CL:0002057;3.82e-11;33!CL:0000473;7.06e-10;39!CL:0000234;7.06e-10;39!CL:0000576;6.06e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-14,72;CL:0000860,7.75e-14,42;CL:0002057,7.75e-14,42;CL:0000473,8.20e-14,48;CL:0000234,8.20e-14,48;CL:0002194,2.27e-11,59;CL:0000576,2.27e-11,59;CL:0000040,2.27e-11,59;CL:0000559,2.27e-11,59;CL:0000839,1.95e-10,66;CL:0002009,2.88e-10,61;CL:0000557,6.10e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.50e-17!659;UBERON:0000926!2.33e-15!448;UBERON:0004120!2.33e-15!448;UBERON:0006603!2.33e-15!448;UBERON:0000480!3.78e-15!626;UBERON:0000467!5.57e-15!625;UBERON:0002050!1.20e-12!605;UBERON:0005423!1.20e-12!605;UBERON:0003081!1.92e-12!216;UBERON:0000923!2.31e-12!604;UBERON:0005291!2.31e-12!604;UBERON:0006598!2.31e-12!604;UBERON:0002532!2.31e-12!604;UBERON:0000922!3.14e-12!612;UBERON:0002193!7.51e-09!112;UBERON:0002390!8.31e-09!102;UBERON:0003061!8.31e-09!102;UBERON:0000062!2.17e-08!511;UBERON:0002204!4.69e-08!167;UBERON:0002371!4.89e-08!80;UBERON:0004765!1.83e-07!101;UBERON:0001434!1.83e-07!101;UBERON:0001474!2.30e-07!86;UBERON:0002405!3.36e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.14e-14,315;UBERON:0004120,3.14e-14,315;UBERON:0006603,3.14e-14,315;UBERON:0003081,5.17e-13,203;UBERON:0002050,2.64e-11,564;UBERON:0000923,4.93e-11,560;UBERON:0010316,4.93e-11,560;UBERON:0005291,4.93e-11,560;UBERON:0006598,4.93e-11,560;UBERON:0010317,4.93e-11,560;UBERON:0002532,4.93e-11,560;UBERON:0005423,2.48e-10,581;UBERON:0002390,3.82e-10,98;UBERON:0003061,3.82e-10,98;UBERON:0002193,3.85e-10,108;UBERON:0002371,2.02e-09,76;UBERON:0002405,4.32e-09,93;UBERON:0000922,5.26e-09,592;UBERON:0001474,1.57e-08,82;UBERON:0002204,1.67e-08,167;UBERON:0004765,2.42e-08,90;UBERON:0001434,5.12e-08,100 | |||
|phase1_expression=2.72517568905835,2.35510576280081,2.11431606143957,3.00219895059391,4.91657203870017,0,5.06599756336621,1.26343974685366,1.56711376919903,2.21160542851358,4.88460817580699,1.74753097704138,2.90143676051299,2.22779435328084,1.65698687863958,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0.738726348460727,1.42800483870977,0.940364164434263,1.14494394852423,0.273748850145768,0.627713197974014,0.305653622991805,0.821005894499457,0.236132343941038,2.75354993794233,1.53531759238885,1.39334510984468,0.919421224478927,1.204823675113,1.47901604066715,0.154934401160603,0.142169232487422,0.293600439334847,2.21598163412751,1.20326668482085,0.217010870715852,2.68698569087909,2.91504299417082,2.31818010870768,7.99690313287606,4.53451132426571,7.76268995801012,7.20530014407622,5.34518254428373,4.02618282163635,2.8769239232215,5.63553554364021,3.31075121844019,4.13694816883942,5.16387746867061,2.70852973188684,5.83551252582075,4.91231070104122,3.59557575112135,3.36692281607993,3.53021929783703,1.91801137739712,6.59702600373432,5.58498241340569,5.96714650745772,1.45104619314292,1.70215567407342,3.11411124497787,4.01997864410789,2.60741459210101,1.95469960234605,3.02699751316684,1.84138817993782,0.632924774881769,3.16882929467913,2.97646019951061,1.46761051855863,1.68492946719743,2.4028302854641,1.92870704036496,2.28010194992999,5.76858363877361,3.47061892152804,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.128091319725675,0.650296737799391,0.164437904603676,1.10540007114339,0,0,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0.637130828648193,0,0,0,0.383959833463255,0,0.473554504088034,0,0.201606743224732,0,0.144824403882799,2.43806866313962,3.35350429851818,0.255725123687061,0.361439152384566,2.00535164254356,2.17269778441236,4.7717156823066,1.45990461090791,0.850813354476611,0.886917589850256,1.93236528524877,3.66741411393595,1.82147644146271,1.11235332835329,1.62273696827342,1.21890816109487,2.52620124985844,0.476981248610684,0,0.371457501329565,1.98762407366705,0.860234595106124,1.73570250803797,5.08777147731609,2.51699661725944,2.47606237746061,1.25396979922086,1.29208379584664,1.42306505074684,2.34304428935269,2.01414658554573,0,2.4406205754817,2.57364156242108,4.86085168729056,1.69669483739752,2.91888184414021,1.68917220724983,3.06633274931766,0.949265659568129,3.29763139074733,6.58902087180316,15.511210565933,0.436094052142534,1.49091585508596,1.2663051166458,1.58891016975863,0.286836620748814,1.06400514659507,0.560677600142307,2.1349799145941,0.74000264525148,0.933633106199299,0.808264032418128,0.490385709340376,1.36221684880438,0.576175924479999,0.937285727335186,1.87296046098192,1.71141546463335,2.24173020827702,0.939475989150119,1.29498355494505,1.54495887372473,0.408308342509787,1.22834317311768,1.96318984233954,4.75201142912821,0.989067717114227,0,3.59309070908119,1.34668891163253,0.750711119231785,1.6623846929051,2.19488810440419,1.83892677479412,2.25357088359895,0.794025282120147,0.538168907066586,1.2813443329114,1.48352330811693,2.10063767259082,1.8549455262919,0.515281080091258,1.67505170698431,0.675105328965065,1.46155507741798,2.52433774244115,1.56484827691909,2.58633690910099,1.06502877754984,1.61203357164224,0.67824236924195,1.73934767846967,1.63647672354501,2.29443676311203,0.975789649036763,1.45782745153634,0.813357600086629,1.14027160516907,1.26160425437814,4.37972830890996,7.8224766164908,3.85944562915731,1.38134921352481,3.25057549622385,3.60939740834793,1.0647612003586,1.01150814046861,1.68707720918437,1.21323370005633,1.08939722046203,0.71181185733329,0.539325232640658,0.784885860501384,1.15424147083917,0.738155454624648,1.40241773803446,1.6462960453256,0,5.07020139287323,7.86261773342101,4.72631925345123,0,1.59884970106048,1.88724591328378,1.42675371031213,1.1240175325762,0.603173834469785,0.555530670951178,1.95484983186195,1.03993478527958,0,0.34779121492523,2.23076519048061,0.433099343283221,0.925971025153221,1.71228737011138,3.95102198979638,1.71697232418975,0.984868024349589,2.10603838625314,1.0404181360211,0.93733833986777,2.18376766658517,1.41775097242386,1.43293636324557,0.290633938513962,2.30029607499127,0,1.14462964217194,3.10992173311158,2.73827911492227,2.39860623510122,0.698476837213859,3.4378958300245,7.03304683260282,0,0.616964956219941,2.40274446275134,2.00078502841405,0.784917590417525,0.87192013766656,0.7333828582095,0.904902010304444,3.57656445851882,3.381211010224,1.86156681609409,3.12022310734098,1.28603687131071,4.25547396069835,1.5985330740966,1.14382394926518,2.17048642156577,2.46972101034231,1.30294473717494,0.710783897485092,0.791951872933429,2.1100756394171,1.74306691720059,2.19940580600526,3.64871341923571,3.51579964002488,2.10833939483032,1.67737398844108,1.14861935834114,0,1.30303176000821,3.28762116080613,1.43248770591916,1.56919201590938,0.788123040807709,0.862510299438069,0.898401253958239,1.77866236955724,0,0,0.837581326671744,1.91381625495949,13.4821264310493,8.97484377612075,15.7477895105693,1.2269149171914,1.00034104211935,1.89885516589815,1.87173775377726,1.60586089917446,1.26161932027148,1.40569697991256,7.52365249319297,2.27407504055985,2.0694614258501,0,1.29058417979192,2.17209036170207,0.783204629850962,0.343143423810856,2.27444828735176,1.2942852049117,1.49418580924822,1.81876542867756,1.66435439510497,1.81434175997808,1.98486246255021,1.53461973288062,1.96462066103151,2.69092213436972,3.58195074346692,2.2519548960105,1.48418066444991,1.3878872442239,1.24293207719189,2.13530605635904,3.63478100428535,1.39452454151951,2.1754700926492,2.6065841139427,1.01289087829486,1.26295892981067,1.27463817604702,1.83574180943194,0.451199612907412,1.5403067420883,0.784349769176855,1.46139224653261,1.37217117560738,1.13733384070897,1.70093705276516,1.94324324491925,9.25363516141736,0.812839312631559,4.01351819083883,0.764628819135115,0,2.23874754722178,0.219259876645935,0.784306353074702,0.256450125116389,0.656029291399411,0.976135183992909,2.7821073144885,0.366277859273374,0.82509499920588,0,2.60024098414608,4.82051789532479,1.06337790121334,0.308097234229289,1.5350367472613,0.551346289938122,1.18162269355101,2.32026710262766,1.36362603865761,1.15741646340759,2.64455864577565,2.69066094311149,0.382838137483752,2.32662895967765,2.32422774648643,0.62962469366128,0,3.38836938193698,1.06461206063404,2.60979897622522,2.59453906745488,1.5743737541619,0.372158369359667,1.89827654831236,3.0500831027812,0.255897791311334,1.71175595213568,3.81843897511124,2.35484592059769,0.359744915166629,1.92175920815238,1.64937363283961,2.02182481573316,1.58510321173008,0.842516912477962,0.975267478179181,1.70599442741899,1.05650146756755,1.50149902548784,1.69686518344455,2.26016233240486,2.75682671773062,2.65375590096488,4.38450885253763,4.6302042741335,1.9676842561399,4.26111791621678,1.8589409885985,0.845086807596724,1.00387946542836,0.687743287091848,2.49669736036875,0.709522128141196,1.47775344708365,1.31717957183961,1.13841952129715,1.74967360122491,0.769776901804097,1.34060455107157,0,2.44773882019626,2.58303223602738,1.68471475667626,0.886860307073351,0.459446800413919,1.01489521846434,2.29391162142713,0.569647187174163,2.38231775457789,3.70226045777575,3.24236655596359,3.24018862342869,1.58625035258854,0.854592569019785,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.318852545457645,0.59873811429845,0.5745161103971,0.423347165447766,0.324621940274555,0,0.912938716132769,0.156679895773023,0,0.50787533340481,0.1605880751037,0.201799707191048,1.27753871307098,0.687010689511529,0.614481528616916,0.671028323677248,0.500547425135725,0.390776190804081,0,0,0.540911356951966,0.99921590399346,1.4098700508785,0.748562161632879,3.07667176470977,0.485442086998054,0.557216921387392,0.284136146806413,0.23874448473769,1.48482340416319,0.921482106297696,0,0.422008249231538,1.66963057534359,1.6480387422676,0.844501632511974,0.996239941255349,1.93398740871803,0.503865495708552,0.920418142519393,0.984678443688556,1.55519793830904,2.51631383212515,1.07412704805365,1.53471711068062,1.67693789582787,2.3948309234694,0,2.90799823828566,1.29875337426592,0,2.3438498497671,2.79871999987826,1.44999915086959,1.0241410345695,3.81380475439149,0,0.689486746482929,0.291604613383254,0.173624994933292,1.77148277162768,0.241192877250816,1.52581736317083,1.10579259931225,1.47773809476774,1.31631238292384,1.63407695278485,5.01925479402972,1.69290568708354,0.91153644677601,1.84451123510448,1.6156375993759,0.869178975376065,0,1.92354946143911,1.06606955203727,0,0.941881538370149,1.32969345520125,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,0.317873157960757,0.421996129056054,1.14262965711403,1.27217764290547,0.649165919226273,3.98104772431402,3.98059040265026,1.83309043480088,0.593042257361244,2.71840665682306,1.46190729307638,1.21322039365219,1.60515529459758,2.10838001152805,1.094728735294,3.7176277597097,0.242780379534093,1.57833761139756,6.04953580243319,0.30607276163049,1.39010475182674,1.9542044523884,0.72581733978073,0.664653872707185,1.323967823502,0.627865836814451,0,1.13843818411917,0,0.694238953340524,1.46988596121566,1.13176968554523,3.31980669659857,0,0.580537987734511,0.877071805034227,0.656923656425674,2.81268147816416,1.3238419003725,0.90392296312213,0.959293472527256,1.58971689362392,0.886351143382302,2.54216797555244,0.320635281006135,2.13452994739353,2.99714414373195,0.864542502924636,1.37443915399099,1.20116498503375,1.1524383839052,0.99402028452346,4.00679858848552,1.22313785466253,0.209205692624666,1.4279750469085,1.44475294950759,1.20084057741958,1.09524303113594,0,4.29765441419957,0.262887354279314,2.23425921017803,1.60412296808179,1.43574604915363,4.5926170114768,6.00916467391199,4.01708623395371,1.00775208730089,2.16179930125442,0,0.945398187686684,0.576911008668165,0.674035438541849,0.885847333632739,0.254019996197353,0.795229689809303,0.408610218334727,1.92903778158023,1.92555211236127,2.49264202817511,0.449947783103001,0,1.64023802976667,1.0063040627978,2.60058834087354,2.20309270166992,0.739202355635845,0.179287339332845,2.68681276247223,3.57347663186684,4.63464379255802,0,3.25799761052228,4.32110745600634,2.93928624098468,2.39460383124975,0.328370082997356,0.511164065356265,1.24643300672138,4.10346254298631,6.62534444561107,2.19781025814636,0.79339561045614,0.342173675768659,0,1.28144895081234,1.41483874589699,3.31391244277756,3.96932817449561,1.7785046870815,0.852548188666271,1.27668251554036,2.72008901684737,1.0027595760908,0.919036730290385,0.655745261419609,2.51286554000375,0,0.610131324509816,1.6274820991845,1.72022758707021,0.776503360757966,1.4903136705932,0.830091809617385,1.12482367165896,1.66814029295813,1.14186133417987,0.705797459094515,0.468334905806882,0.579684114443301,0.597019211547496,0.233713309847224,1.66441758450784,0.757612021100357,1.25783950876288,5.33886732957922,1.37304041038154,1.05861646634267,0.777186002913902,1.03498604992744,1.43367090447332,1.34940933649081,0.931577741257556,2.90294345488599,0.53168342911599,1.5652351854352,0.450772826991655,1.14241563650639,0.813741466409323,1.45478927362048,0.966695013382396,0.928067519756987,3.18476710958893,0.400027764663154,2.40376993627955,1.6837474438296,2.52369796457302,0.385239660814607,1.92997432237433,0.521988583930423,1.58694147858591,3.24131464053368,0.97894681802587,1.96997725189636,0.617602894321944,1.97355644620836,2.12026975135057,0.578742114812744,0.168942440653073,1.53744911152768,0,1.51929978088691,1.10606748921385,0.974301544196942,1.0629187225069,0.327130788511688,0.655219697692825,0.737318726261158,3.16968185037941,2.59983614611409,0.213383459388282,2.41100971525142,3.97261167496785,1.10463570151104,0.419638523158333,1.24415452006595,0.895260599125562,0.862598491173454,0.157265941855896,0.436838552768056,0,0.212574920101683,1.11542187833102,0,2.86203915588077,0.23658523500376,1.60114149657094,1.76337971845342,3.062454773532,1.22035527683273,1.41696576325585,0.798169295285756,2.66651273512982,0.756215088665154,1.1756732918917,1.45328081068666,9.99385941814081,0.490738592505128,0.353909170043221,2.56800037930351,3.00366731990879,0.762764190934334,3.4517996303005,0.397832444232549,0.82731361184183,0.20170506870352,7.03362610109783,1.04762677792569,1.14640342257068,3.10497781055795,1.01306376927592,2.34323429584154,0.413373593002368,1.07806877329642,2.18789923607288,0.548257766857182,3.47347824872506,0,3.57734797390867,0,1.00885116665647,0.606965604236632,0,1.41923792260222,0.345701962667338,2.22934412268644,2.17503145525861,1.11813715056843,1.18193840883968,0.444925607568277,1.49136876415977,0.628462359664008,4.76462677633441,7.30526976407596,1.07963795609311,0,1.78691360441641,0.158013611732727,0.348724276104376,1.21700790611806,3.20684545892101,1.86494547746733,1.19502933965765,4.83881763269864,1.72090943528111,0.709992004383392,0.937347452350735,2.11693525095465,1.14553434272025,2.48165108531456,0.955538938977433,0.559277158988962,2.65005630761156,2.43835849964539,5.82685953469105,4.31183788796237,0,3.88568794447312,0.935757853848423,1.39265542612958,0.951360726220549,1.35535298446752,0.439762066981716,4.07599677630019,5.63371354187996,2.18559560503957,1.88126918544609,1.71603825227734,1.41405928260976,1.76677620403451,0.594092800654172,2.5359343655004,2.0391253762538,1.87967835959707,4.06084694233536,0.699588091474503,1.07132363163395,2.11736923029415,3.12941330087756,4.3820183294791,0.917458566809082,1.29005624836306,0.946629373159108,1.8357702351547,0,3.1741610430924,1.85997509083376,0.462175628631418,1.73050624849516,1.13549782351571,1.20192129160065,1.90047751517155,1.42784361638774,0,1.92979289023174,0.50141507858475,1.74291005901951,4.28742608249886,0,0.930896962757057,4.26467963801962,0.714193294391221,1.0980114672121,2.3588391432426,1.56984607612859,1.2729431655633,1.81905470062397,3.48346796635138,1.36893320434112,2.89613827962726,1.57788851863888,0.665320713092027,1.87227517805241,1.70763753404345,5.7921684686082,3.59300808426348,4.69281884806909,2.68931177202306,2.84827324821017,1.99727032255654,2.81783311027437,0.641136984606466 | |||
|short_description=p5@UBE2R2 | |||
}} |
Revision as of 01:14, 23 January 2014
Short description: | p5@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UBE2R2_5end |
Coexpression cluster: | NA |
Association with transcript: | 171bp_to_ENST00000263228_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.17e-14 | 72 |
classical monocyte | 7.75e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.75e-14 | 42 |
defensive cell | 8.20e-14 | 48 |
phagocyte | 8.20e-14 | 48 |
monopoietic cell | 2.27e-11 | 59 |
monocyte | 2.27e-11 | 59 |
monoblast | 2.27e-11 | 59 |
promonocyte | 2.27e-11 | 59 |
myeloid lineage restricted progenitor cell | 1.95e-10 | 66 |
macrophage dendritic cell progenitor | 2.88e-10 | 61 |
granulocyte monocyte progenitor cell | 6.10e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.14e-14 | 315 |
mesoderm-derived structure | 3.14e-14 | 315 |
presumptive mesoderm | 3.14e-14 | 315 |
lateral plate mesoderm | 5.17e-13 | 203 |
embryonic structure | 2.64e-11 | 564 |
germ layer | 4.93e-11 | 560 |
germ layer / neural crest | 4.93e-11 | 560 |
embryonic tissue | 4.93e-11 | 560 |
presumptive structure | 4.93e-11 | 560 |
germ layer / neural crest derived structure | 4.93e-11 | 560 |
epiblast (generic) | 4.93e-11 | 560 |
developing anatomical structure | 2.48e-10 | 581 |
hematopoietic system | 3.82e-10 | 98 |
blood island | 3.82e-10 | 98 |
hemolymphoid system | 3.85e-10 | 108 |
bone marrow | 2.02e-09 | 76 |
immune system | 4.32e-09 | 93 |
embryo | 5.26e-09 | 592 |
bone element | 1.57e-08 | 82 |
musculoskeletal system | 1.67e-08 | 167 |
skeletal element | 2.42e-08 | 90 |
skeletal system | 5.12e-08 | 100 |