FFCP PHASE1:Hg19::chr9:21031615..21031651,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20920 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VWC8 | |||
|association_with_transcript=0bp_to_ENST00000495827,NM_001010915,uc010miq.1,uc010mir.1_5end | |||
|coexpression_cluster_id=C1627 | |||
|description=CAGE_peak_1_at_PTPLAD2_5end | |||
|id=chr9:21031615..21031651,- | |||
|ontology_enrichment_celltype=CL:0000037!6.75e-29!172;CL:0000566!6.75e-29!172;CL:0000738!1.19e-28!140;CL:0002087!8.49e-28!119;CL:0002032!8.66e-28!165;CL:0000837!8.66e-28!165;CL:0002320!5.05e-26!365;CL:0000988!2.01e-25!182;CL:0000134!1.35e-24!358;CL:0002031!3.36e-23!124;CL:0002057!1.20e-22!42;CL:0000766!6.27e-22!76;CL:0002009!1.60e-21!65;CL:0002194!3.76e-21!63;CL:0000576!3.76e-21!63;CL:0000040!3.76e-21!63;CL:0000559!3.76e-21!63;CL:0000763!7.16e-21!112;CL:0000049!7.16e-21!112;CL:0000860!1.46e-18!45;CL:0000557!4.33e-18!71;CL:0000048!2.75e-17!430;CL:0000723!3.57e-17!436;CL:0000034!6.11e-17!444;CL:0000839!7.37e-17!70;CL:0000219!9.17e-16!390;CL:0002371!4.84e-09!591;CL:0000791!7.36e-09!18;CL:0000789!7.36e-09!18;CL:0002420!7.36e-09!18;CL:0002419!7.36e-09!18;CL:0000790!7.36e-09!18;CL:0002393!3.41e-07!9;CL:0002397!3.41e-07!9;CL:0000625!6.48e-07!11;CL:0000838!7.71e-07!52;CL:0000542!8.02e-07!53;CL:0000051!8.02e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.48e-16;48!CL:0000860;1.41e-15;33!CL:0002057;1.41e-15;33!CL:0000473;8.40e-15;39!CL:0000234;8.40e-15;39!CL:0000766;1.10e-11;69!CL:0002087;2.17e-09;104!CL:0000791;7.15e-09;18!CL:0000789;7.15e-09;18!CL:0002419;7.15e-09;18!CL:0000763;3.94e-08;100!CL:0000738;4.73e-07;136!CL:0000625;6.35e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.37e-31,168;CL:0000738,4.19e-31,136;CL:0002087,1.46e-30,115;CL:0002032,4.56e-30,161;CL:0000837,4.56e-30,161;CL:0002320,6.53e-28,361;CL:0000988,6.78e-28,177;CL:0000134,1.95e-26,354;CL:0002031,1.76e-25,120;CL:0002009,4.41e-25,61;CL:0000766,5.00e-25,72;CL:0002194,9.55e-25,59;CL:0000576,9.55e-25,59;CL:0000040,9.55e-25,59;CL:0000559,9.55e-25,59;CL:0000473,1.66e-24,48;CL:0000234,1.66e-24,48;CL:0000763,2.62e-23,108;CL:0000049,2.62e-23,108;CL:0000860,1.10e-22,42;CL:0002057,1.10e-22,42;CL:0000557,6.32e-21,67;CL:0000839,1.39e-19,66;CL:0000048,8.10e-19,427;CL:0000723,1.04e-18,433;CL:0000034,1.85e-18,441;CL:0000219,3.82e-17,386;CL:0000791,7.14e-09,18;CL:0000789,7.14e-09,18;CL:0002420,7.14e-09,18;CL:0002419,7.14e-09,18;CL:0000790,7.14e-09,18;CL:0002393,3.33e-07,9;CL:0002397,3.33e-07,9;CL:0000625,6.34e-07,11;CL:0000838,7.89e-07,52;CL:0000542,8.20e-07,53;CL:0000051,8.20e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-16;42!CL:0000790;7.15e-09;18!CL:0000049;3.79e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.07e-24!102;UBERON:0003061!3.07e-24!102;UBERON:0002384!5.83e-24!375;UBERON:0002193!3.34e-22!112;UBERON:0002371!3.54e-19!80;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0001474!5.31e-15!86;UBERON:0002405!8.87e-12!115;UBERON:0002204!2.11e-09!167;UBERON:0003081!4.70e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.01e-27,98;UBERON:0003061,5.01e-27,98;UBERON:0002384,1.28e-25,371;UBERON:0002193,1.14e-24,108;UBERON:0002371,6.76e-22,76;UBERON:0002405,2.17e-20,93;UBERON:0004765,6.40e-20,90;UBERON:0001434,1.11e-19,100;UBERON:0001474,3.71e-17,82;UBERON:0002204,2.94e-11,167;UBERON:0003081,1.14e-08,203;UBERON:0000926,4.02e-08,315;UBERON:0004120,4.02e-08,315;UBERON:0006603,4.02e-08,315 | |||
|phase1_expression=9.81063248061006,5.99481466894753,6.76581139660662,13.009528785907,8.93922188854576,10.4680622892044,5.06599756336621,2.52687949370732,4.96252693579693,9.58362352355885,6.97801167972428,46.7464536358569,43.5215514076948,41.0904291827355,36.4537113300707,1.34465029290355,1.20538905604795,1.46062018077475,0.487932798790507,13.5433163884467,9.38403179723564,4.38836610069323,5.72471974262113,4.92747930262383,3.76627918784408,19.1033514369878,14.5318043326404,17.5525042329505,57.43118441994,64.8671682784289,56.6627011336838,23.9049518364521,15.0602959389125,17.378438477839,0.387336002901508,0,66.3536992896755,79.7753388285903,92.8520791786756,86.370326544909,46.1265876934244,54.4141358911886,45.3332999036168,54.2335430647776,77.0866925125171,45.3632194421216,53.6911075252131,62.9086868673393,53.888908535748,59.264632818363,79.1536583174921,61.9583442308093,57.5725286830153,74.8762232957238,71.7760378950011,63.814153104943,59.2206345625525,37.079374933439,50.5038422411989,62.9020893069143,40.9175760511386,53.1060593300613,79.1870720757879,58.8190155735118,52.8180814304023,38.5821952789975,29.272645702792,76.1283455727932,80.308369436711,68.848863771522,52.0643572264697,66.6582521137492,48.4187452784553,145.343636982616,126.074349879271,135.858802289428,135.131343269234,137.56203384282,180.173382687427,129.965811146009,112.984672649083,124.211624559951,36.9592113368778,42.5988116784463,49.8125182163591,30.7245760247885,34.8344508721331,52.302472035858,39.0016474943069,48.6567414813036,41.5525467449897,28.1873850898051,24.0832133718894,55.5119580031909,44.8406850385229,62.9487962612434,47.6037643675476,33.0129040709298,44.409923783894,60.6886978268162,43.3476614622675,54.9199454652291,56.4997512382943,72.6396178891332,50.3776101781972,73.5492530017622,70.6798084426691,89.2796498487956,83.1079230907622,79.4235079235756,66.3240042686036,57.6708140612754,42.7065301906734,54.8458697583912,50.1770514263889,67.4190589050519,50.9683256490555,62.196567632356,64.7730411569927,70.4029565656254,91.1516835398986,85.5406840003537,60.982923226498,85.2390830288426,69.9612068693137,78.8468249306576,87.0395676736309,49.1920453468347,38.2439479970415,36.6405741823481,12.1903433156981,18.7796240717018,11.7633556896048,20.9634708383048,13.0347856765331,24.3342151854184,6.36228757640879,5.83961844363163,14.1802225746102,11.9733874629785,8.95914814069886,10.4128365020682,19.6719455677973,16.3145154825149,21.0955805875544,23.8557740099996,25.2620124985844,13.5939655854045,15.4438625910635,10.4008100372278,0.993812036833525,1.72046919021225,1.73570250803797,1.13061588384802,1.67799774483962,1.6507082516404,1.67195973229448,9.30300333009584,17.7883131343355,3.3472061276467,4.83395180530976,9.12326526862215,2.68468263302986,3.67663080345869,1.62028389576352,15.8953516345662,14.8189385933272,13.288154697032,1.53316637465883,0.949265659568129,1.28241220751285,77.7504462872773,127.967487168947,6.10531672999548,7.9515512271251,1.8994576749687,2.1185468930115,5.73673241497627,13.4773985235376,8.97084160227691,5.33744978648525,2.71334303258876,14.0044965929895,17.3776766969898,12.5865665397363,5.2975099675726,11.5235184896,12.8876787508588,36.8348890659778,10.8389646093445,36.0171320129841,24.1915067206156,18.6153886023351,27.5283581136407,40.6266800797238,32.4282597703067,51.1462616820039,24.9480600029231,23.2430913521843,12.7422590671324,20.8399261126709,39.8956590071137,19.8938446596423,43.7761302465009,25.0217243902078,18.3892677479412,17.2773767742586,7.71338845488143,12.3778848625315,24.5590997141353,27.551147150743,27.3082897436806,36.3775428211689,12.8820270022815,25.3118924610962,8.43881661206331,5.74878330451072,13.6314238091822,27.062670200836,65.7899451252564,25.2056810686796,19.9489154490728,17.8038621926012,50.8276043819471,45.0031098974877,22.9443676311203,1.46368447355514,1.85541675650079,2.44007280025989,3.21349270547648,2.77552935963191,5.47466038613745,40.6768784057521,30.8755650332585,30.3896826975457,72.9057647010207,65.6910328319323,4.96888560167344,4.21461725195254,3.37415441836875,4.85293480022533,3.05031221729369,4.27087114399974,3.91010793664477,2.74710051175484,4.23221872641029,18.4538863656162,8.41450642820675,20.1671265552386,16.1709582524096,1.26755034821831,1.96565443335525,4.13552934676983,0,0,13.2107213929865,26.1205679272529,8.99214026060957,20.708968316796,29.6283024507295,5.2129328849652,29.1181739878282,20.2063878835383,11.2452492825825,5.9878434060269,6.20775725372617,5.09284063834272,3.80508304469197,0,0.858486162094873,35.2090318704978,45.3968274370121,42.8057747391537,44.9922403136529,54.5941916646293,48.3453081596538,0.268675568108545,0.290633938513962,0,1.47798971368783,0.616339038092582,4.76854665743776,4.4677185559258,2.90357596880674,5.58781469771088,9.54971063895694,9.37739577680376,18.8179690624976,8.02054443085923,0.901029173531752,12.0047101704843,13.3435990370979,20.4901232351642,20.1680286007613,5.94649892485778,32.1890801266694,10.143633030672,39.8907174877306,49.9235697174557,15.6896498299907,12.766421882095,14.3867976668694,26.8798628077317,13.0229185293946,17.2880470723961,9.12061316022458,19.9019491295826,14.2551337128017,26.225225804184,19.1737360892065,29.4920323987068,45.0007988372405,40.6828244060022,33.7334303172851,5.27174682081482,27.5668646001873,7.13184525203592,8.54209709338717,12.7395319981238,8.41586527227509,20.7357516388025,51.0309668922991,31.697253504349,46.0751500244297,3.55732473911449,0,0,1.84267891867784,0,177.514664675482,209.413021442817,246.991646007877,38.1570539246525,45.5155174164306,38.5196333653625,33.4833087064599,23.7310555100225,25.2323864054295,21.9054446036374,16.8529815847523,18.1926003244788,15.5209606938757,7.97070718242524,10.5090426068771,49.263009403403,7.83204629850962,8.23544217146054,94.4929879381595,79.382825901251,60.301070158946,13.3376131436354,43.2732142727292,37.1940060795507,7.19512642674453,1.84154367945675,7.85848264412606,12.5576366270587,12.7926812266676,9.81208918976006,16.325987308949,19.1220020315293,14.5600614756764,20.3675346914247,19.7316683089776,25.9149143965709,0,22.2562182036646,6.62983120338454,13.0888470907652,19.301663808712,36.5837117736793,6.76799419361118,7.47048769912823,3.13739907670742,1.46139224653261,7.3886140225013,4.54933536283586,5.27290486357199,11.6594594695155,7.71136263451447,7.58650025122788,9.03041592938736,7.64628819135115,5.81753206250107,7.83561641527624,7.67409568260771,7.58162807972212,5.38545262744417,4.26419039409617,2.92840555197873,25.6572119002828,0.457847324091717,1.23764249880882,18.9507627538737,27.9525905795704,24.1025894766239,7.54031602678551,8.47267394130544,11.2057682550075,6.89182862422653,33.5151163989014,31.9036726611303,12.5283142301668,7.30062692303246,22.313463573732,9.99388350298552,37.6457501859023,15.274824909188,6.97268323945929,5.98143458978216,2.0911118104818,9.54904098545875,3.72614221221915,1.73986598415015,2.59453906745488,1.5743737541619,34.9828867198087,29.7396659235602,42.3199030510891,11.2595028176987,21.396949401696,4.77304871888905,4.70969184119538,41.9102826169123,26.9046289141334,19.6746711917296,2.42618977887979,0,10.1102029497355,16.0919133899565,7.31140468893853,5.28250733783777,28.937981218493,14.1405431953713,6.78048699721457,4.41092274836899,2.65375590096488,5.26141062304515,23.7297969049342,47.8803168994042,4.66693867014219,8.36523444869325,3.94373843545138,20.0775893085672,14.2461109469026,3.92338156629375,46.1189383291777,31.2439300240543,14.8182701831956,12.1431415605029,15.3971276907792,20.5915321232596,27.4823932969673,26.1338363667174,26.4544080182749,22.8167847515752,11.7930032967338,23.5017981374438,41.5799354374597,165.935368218919,155.985990257045,138.424266483322,103.630822324138,117.238247829565,154.336648063867,151.74883386391,149.107533143323,0,0,13.9672923109188,15.7932698856861,0,0,10.8409865455599,30.5356438292209,60.5156969618279,28.5759336677242,30.8390843260828,78.342412693655,38.1151913985431,8.93075405906233,52.6332401889141,71.7797137878798,24.7305635659697,28.4537587139377,0,62.5179727455492,31.9530394880796,36.4592055864638,37.3742077434675,69.9489381539304,14.1987148686574,3.69262196843137,0,54.9568747196403,11.278960407028,0,9.8160480112169,0,7.91248028370096,0,109.5837184946,76.6168876548208,224.227312532439,3.97659059106519,12.0975698113041,6.56721359635145,0,0.844501632511974,27.6954703668987,21.8264293269607,2.51932747854276,0,30.8942861707284,8.08702927920699,2.15684042753584,2.86433879480975,45.5299409501916,12.1331388933428,198.77096664796,6.66821940867821,4.84666373047609,4.36010061360701,0,0,0,21.024987687609,10.468997242266,14.4924580666877,0,0.344743373241465,0,1.56262495439963,10.6288966297661,16.6423085303063,0,2.10100593869327,4.43321428430321,7.67848890038904,0,1.39423744278603,16.5443055783164,0,0,0,0,49.7641809181794,28.8532419215866,41.0436777534349,108.324896087481,53.2163069179134,17.6184382814166,0,0,0,0,18.9134528986651,0,0.489698424477443,0,0,22.8910244148056,15.391616223581,30.5515072466813,0,0,0,6.53790989912567,12.0386647094818,6.79366892603483,0.182454789215666,17.8054803228202,0,4.73501283419269,36.2972148145992,5.81538247097931,20.2828920607446,0,0,0,0,0,0,5.40758137456606,0,20.3064893852103,9.99522453626652,0.261177619741208,13.4539534546363,9.63121781841053,0,0,0,22.7924188747786,0,18.0784592624426,0,0.19871461170299,6.20445800367611,16.4263161497235,0,18.9973165318024,11.1893381365993,0,0,0.686379991447858,0,32.3056592470125,19.562604873194,0,0,0,4.6232094384243,5.4037825983881,15.3334024359032,24.2718517327247,22.3478029538378,0,8.37847203816763,8.47893568843229,6.46085722119133,16.9727150424142,4.29226048136571,4.46342914883745,3.49354056930977,16.5737946429506,0,0,0,0,0,0,7.15706720828373,10.896272488926,4.98334760241559,1.92555211236127,1.24632101408756,29.9215275763496,27.0830684095282,4.98146364595802,0,5.83162234014067,4.93073128468982,4.22401346077626,0,32.6255835443057,25.7290317494412,10.5934715258469,0,26.0639808841782,19.8770942976292,35.924609612035,3.59190574687462,15.269208859377,17.5499662438984,19.1497434669012,3.51725360827398,6.62534444561107,3.23207390903876,9.65297992721637,1.36869470307464,17.6203755579168,31.5022867074699,64.925378006162,68.3494441322873,37.2124516358963,0,24.4803122745601,8.29843635101236,0,1.5041393641362,1.53172788381731,1.31149052283922,0,2.65820453990096,4.39294553647067,7.51145584238999,7.45431954397093,9.5398984321693,7.1410863382591,0,0,8.64399969987393,5.70930667089935,0.235265819698172,0,2.8984205722165,12.6866582453843,28.7467371112086,23.8566520446124,51.3282144295492,35.2195062453605,25.8045254262995,6.40752191511386,11.6447811297694,13.9893480524502,5.91420599958536,19.5935023611354,13.0442902527445,29.6552247633655,26.5411973018147,35.6227897507713,16.6958419779755,38.3156902942907,25.1331440031405,25.6328561918937,22.5492337411174,30.5045982000667,32.0183294316161,23.885753321917,4.80033317595784,17.5131809643224,18.5212218821256,0,7.70479321629213,14.1531450307451,0,0,0,4.16052397660995,0,21.3072998541071,8.11350983441216,34.4543834594468,0.964570191354574,18.2457835905318,2.56241518587947,2.76344273384959,30.6898555739156,8.01898929680038,12.4710597657209,21.1255096098247,25.0255053211442,6.87980682577466,16.2210119777455,1.47918486351039,5.79963447979297,17.0706767510625,112.628596698173,19.2955424212724,0,6.15469833965556,23.638935881253,0,0,1.88719130227076,0.436838552768056,0,4.46407332213534,1.61116493536703,0.558644917973244,13.9921914287504,8.1227597351291,1.60114149657094,4.93746321166957,28.1745839164944,7.00098553551409,1.41696576325585,8.46059453002902,5.33302547025963,1.00828678488687,2.28218933131919,4.84426936895553,4.28308260777463,5.88886311006154,0,27.5142897782519,28.5348395391335,16.7808122005554,0,0,12.4849145059767,0.80682027481408,3.90757005616546,0,0.982631505060581,0,3.91717990786689,3.12431239445539,7.02735108104026,3.61470118105269,1.09394961803644,4.93431990171464,20.8408694923504,0,11.1153312046448,6.96412386641773,5.04425583328236,3.64179362541979,4.09791944432336,16.3212361099255,18.8983739591478,0,5.43757863814654,2.89400203676536,5.55511052154651,0,13.893277434541,7.38443272605209,0,28.3079203357944,25.0476005813601,6.6885236304187,14.7956446445679,0,0,2.43401581223611,16.8359386593353,5.38762026823896,2.0486217251274,2.07377898544228,7.31386509994472,0,0,5.92741870267301,0,17.6817639828662,16.2441619626164,1.90154234056247,0,0,0,2.46390736454993,9.27851545070559,22.8284166737796,1.40363678077263,0,0.356760272332706,0,0,0.150962843566674,13.8141743013221,24.9157898974511,0,23.7793872101288,0.235676547101626,9.42280642151737,25.5459904281294,8.453114551668,5.94744901407359,20.7704458735476,15.2765194497378,14.6913499209646,0,6.35210769088245,0,9.49437304720472,9.17458566809082,12.3272041510248,0,3.19560003897299,0.872701380680755,15.870805215462,27.5276313443396,53.1501972926131,42.8300296502551,5.17282341823824,5.90034088603956,10.7693725859721,8.87302818755241,1.87052183685892,1.92979289023174,4.011320628678,5.75918106458619,4.01946195234268,2.48750831837634,13.6531554537702,18.3381224434844,19.9974122429542,34.0383554835752,35.5067365772307,18.27749360064,5.41000845364402,15.7651407387411,13.7161551175086,21.902931269458,15.9624365644572,26.2503271737195,22.9535646016749,15.1410079616413,10.886189279527,30.8915651659104,0,18.7712753922763,18.33621662743,21.9723936290499,13.9808922578958,24.9579504052873,21.4780889843166 | |||
|short_description=p1@PTPLAD2 | |||
}} |
Revision as of 01:01, 23 January 2014
Short description: | p1@PTPLAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPLAD2_5end |
Coexpression cluster: | C1627_Whole_Neutrophils_CD14CD16_CD14_blood_CD8_Eosinophils |
Association with transcript: | 0bp_to_ENST00000495827, NM_001010915, uc010miq.1, uc010mir.1_5end |
EntrezGene: | PTPLAD2 |
HGNC: | 20920 |
UniProt: | Q5VWC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.01e-27 | 98 |
blood island | 5.01e-27 | 98 |
connective tissue | 1.28e-25 | 371 |
hemolymphoid system | 1.14e-24 | 108 |
bone marrow | 6.76e-22 | 76 |
immune system | 2.17e-20 | 93 |
skeletal element | 6.40e-20 | 90 |
skeletal system | 1.11e-19 | 100 |
bone element | 3.71e-17 | 82 |
musculoskeletal system | 2.94e-11 | 167 |
lateral plate mesoderm | 1.14e-08 | 203 |
mesoderm | 4.02e-08 | 315 |
mesoderm-derived structure | 4.02e-08 | 315 |
presumptive mesoderm | 4.02e-08 | 315 |