FFCP PHASE1:Hg19::chr8:144450985..144451002,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19973 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCX5 | |||
|association_with_transcript=-22bp_to_NM_052924,uc003yyb.2_5end | |||
|coexpression_cluster_id=C4731 | |||
|description=CAGE_peak_3_at_RHPN1_5end | |||
|id=chr8:144450985..144451002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.02e-13!143;DOID:305!8.80e-13!106;DOID:162!1.67e-10!235;DOID:14566!6.16e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.28e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.76e-15!57;UBERON:0005068!5.76e-15!57;UBERON:0006241!5.76e-15!57;UBERON:0007135!5.76e-15!57;UBERON:0007023!1.69e-13!115;UBERON:0005743!1.76e-13!86;UBERON:0001017!3.93e-13!82;UBERON:0000073!7.96e-13!94;UBERON:0001016!7.96e-13!94;UBERON:0002780!8.03e-13!41;UBERON:0001890!8.03e-13!41;UBERON:0006240!8.03e-13!41;UBERON:0000955!1.52e-12!69;UBERON:0006238!1.52e-12!69;UBERON:0003080!4.21e-12!42;UBERON:0002346!7.04e-12!90;UBERON:0002616!7.18e-12!59;UBERON:0002020!1.44e-11!34;UBERON:0003528!1.44e-11!34;UBERON:0001893!1.71e-11!34;UBERON:0002791!5.09e-11!33;UBERON:0001869!6.79e-11!32;UBERON:0003075!7.57e-11!86;UBERON:0007284!7.57e-11!86;UBERON:0003056!5.78e-09!61;UBERON:0000956!1.74e-07!25;UBERON:0000203!1.74e-07!25;UBERON:0001950!2.06e-07!20;UBERON:0002619!2.81e-07!22;UBERON:0000153!5.13e-07!129;UBERON:0007811!5.13e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.26e-12;34!UBERON:0001869;7.62e-12;32!UBERON:0003528;1.55e-11;34!UBERON:0002020;1.55e-11;34!UBERON:0002780;2.10e-11;41!UBERON:0001890;2.10e-11;41!UBERON:0002619;3.13e-11;22!UBERON:0002791;3.78e-11;32!UBERON:0001950;6.08e-11;20!UBERON:0000073;2.02e-10;53!UBERON:0002616;2.02e-10;53!UBERON:0000956;2.50e-09;25!UBERON:0000203;2.50e-09;25!UBERON:0000955;8.54e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.69e-18,56;UBERON:0005068,1.69e-18,56;UBERON:0006241,1.69e-18,56;UBERON:0007135,1.69e-18,56;UBERON:0000073,1.45e-17,53;UBERON:0002616,1.45e-17,53;UBERON:0002780,2.68e-15,41;UBERON:0001890,2.68e-15,41;UBERON:0003080,2.68e-15,41;UBERON:0006240,2.68e-15,41;UBERON:0000955,6.91e-15,68;UBERON:0006238,6.91e-15,68;UBERON:0001017,9.41e-15,81;UBERON:0003528,4.05e-14,34;UBERON:0002020,4.05e-14,34;UBERON:0001893,5.22e-14,34;UBERON:0001869,5.30e-14,32;UBERON:0001016,1.22e-13,89;UBERON:0002791,1.30e-12,32;UBERON:0002346,9.55e-12,86;UBERON:0002619,3.33e-11,22;UBERON:0001950,6.43e-11,20;UBERON:0003075,1.26e-10,82;UBERON:0007284,1.26e-10,82;UBERON:0007023,1.93e-10,114;UBERON:0000956,2.62e-09,25;UBERON:0000203,2.62e-09,25;UBERON:0003056,3.63e-09,61;UBERON:0010371,1.23e-08,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0.626909442956176,0.85870796139317,0.410623275218653,0.502170558379211,0.61130724598361,0.164201178899891,0.236132343941038,0,0,0,0.919421224478927,0.6024118375565,0,0.387336002901508,0.710846162437108,1.17440175733939,0,0.200544447470142,0.217010870715852,0.671746422719773,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,1.31692042387539,0.983548850569165,1.57204305099666,1.43921049299656,0.668745981562712,1.62961133316795,2.36723902867367,0,0.891283655081389,0.294605907474837,0.886135578334485,0.270803863765016,1.0247305578054,0.780356085359269,1.64437904603676,1.10540007114339,0.579606171470105,3.26230438956533,2.1403266247177,1.04535523804977,1.35971211237079,1.14966148080576,1.37450978193052,0.759059076058509,1.27426165729639,1.30216690771284,0.950452044448374,0.602300476311091,0.76791966692651,1.24930726552346,2.13099526839615,0.821127996921047,1.81446068902259,0.534880391567015,1.59306844271079,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0,0.790513071238134,1.76821751921912,0.728590576585084,0,1.29818957461873,1.74129737299267,2.39324328933957,3.10037811596945,3.43196946468077,1.11437250398869,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0.550236083880135,0,1.55050055501597,1.06729878806013,1.67360306382335,0.402829317109147,0,3.1728067481262,0.367663080345869,0,0.625098097988558,0.673588117878509,0.675668882899933,0,0,0.916008719652036,1.31780417436063,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.34171076742555,1.19276791489337,1.04574548582567,1.14027160516907,1.26160425437814,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.110293972732394,0.653638332277218,0.474541238222193,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,6.18048339180511,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,1.15930404975077,0.352226082707465,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0.514137463516618,0.300343057843917,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0,0,0,0,0.985153801009636,0.646882724578552,0.513372145118994,0.254094624222463,0,0.773288812777695,1.17261385734044,0,0,0,0.414415513436035,0,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0.206768026122887,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,2.70719767744447,0.693138033939733,0.784349769176855,0,0.73886140225013,0,0.340187410553031,0.431831832204279,1.54227252690289,1.62567862526312,2.50844886927427,0.254876273045038,1.66215201785745,0.223874754722178,0,0.261435451024901,0.256450125116389,0.984043937099117,0.325378394664303,0.206082023295445,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,0.282431402330337,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0.534120355637366,0,1.47024129588619,0.371606350251437,1.44269212976445,2.70339004723974,2.39139409093234,0,0.766021480529467,0.635020748171649,0.649243880549111,1.68478306868075,1.36940807419915,0,7.51903431270201,0.677167111206413,0.481764225311099,0.201799707191048,1.27753871307098,0.687010689511529,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,1.49712432326576,0.293016358543788,3.15537356548735,0,0.568272293612826,0.23874448473769,0.296964680832639,0,0.994147647766298,3.23539657744179,0.222617410045812,1.97764649072111,2.74463030566391,0,0.552567831062295,1.0077309914171,0.409074730008619,0.861593638227486,0,1.07842021376792,0,2.04628948090749,0.197286811273867,2.3948309234694,0,2.90799823828566,1.29875337426592,0,1.30213880542617,2.62379999988587,0,1.4793148277115,2.54253650292766,1.41832609060762,1.72371686620732,0.291604613383254,0.173624994933292,2.65722415744152,6.27101480852121,1.52581736317083,0.221158519862449,0.591095237907095,1.09692698576986,0.871507708151921,0.278847488557207,0.307801034015188,0.113942055847001,0.46112780877612,0.987334088507493,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.317873157960757,3.16497096792041,0.652931232636591,0,1.51472047819464,0.995261931078505,0.0884575645033392,0,1.18608451472249,0.617819694732514,0.835375596043643,1.41542379259422,0,0.468528891450678,0.364909578431332,0.978323094660449,0.242780379534093,3.15667522279512,0,0,0.063186579628488,0.150323419414493,0.414752765588989,3.98792323624311,2.64793564700399,1.56966459203613,3.58417289318877,1.13843818411917,2.4961441142365,0.867798691675654,0.0979923974143777,0.0870592065804026,2.62090002363045,1.0319161948297,0.870806981601766,0.438535902517113,1.72442459811739,0.193978032976839,1.059073520298,1.80784592624426,0,0,2.21587785845575,1.95551382734803,1.12222348352147,1.49417096317547,1.79828648623917,1.00863292007874,2.1761953271524,2.05913997434357,0.288109595976299,2.23654564017779,2.12124631155116,1.35904206073614,0.627617077873999,0.101998217636322,0.288950589901519,0.600420288709789,1.9166753044879,11.4971929260275,0.429765441419957,0,0,0.229160424011684,0,1.19807400299395,0,0,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0,0.590564889088493,0,0,3.26888174667781,1.76828463311521,0.825236619583403,0,0,0,2.18698403968889,0,0.551639951094387,1.57363764404994,1.16160370171347,0.35857467866569,0.959575986597226,0,0,1.27134268827375,0,0,0,0,0,0,0.79318464064088,0.293104467356165,0,1.68067843270016,1.85125642439766,0.855434189421647,2.11444506695002,0.213574825135389,0.78602152549833,0.414239055347196,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0.785270481251171,0,1.46431517882356,1.8778639605975,1.72022758707021,2.21858103073705,1.36612086471044,0.553394539744923,0,0.454947352624943,1.14186133417987,0,2.34167452903441,4.34763085832475,0,0,0,0,0,0,0.457680136793847,0,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,1.71553273099941,1.30497145982606,0,0.694567422971502,0.244736704506468,0.537266523244462,0,1.53498834705095,0.176689145945881,0.192914038270915,0.337884881306145,0.512483037175893,0,0,2.35039341457942,0,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,2.74705760366215,0.59996218756479,1.38699248602383,0.861074898304078,0,0,0.279759015438889,0,0.383683113910955,0.107824811396682,1.57265941855896,0,1.01839517972415,0.425149840203366,1.98297222814403,1.67593475391973,0,1.02520268501629,0.80057074828547,0.705351887381368,0,2.6976274540513,4.25089728976755,2.39450788585727,1.02558182120378,1.26035848110859,2.42050383624763,2.58361033010962,0,0.981477185010256,0.235939446695481,0.183428598521679,0.577628330751691,0,0,1.39241355481392,0.225630985047772,0.20170506870352,0.781514011233092,0,0.818859587550484,0.887136517302272,1.75597720007826,0.781078098613847,1.86018116851066,1.96589011601111,1.09394961803644,0,0.496211178389294,1.40696995487696,0.894336993477167,1.07140367175657,0.672567444437648,3.64179362541979,2.95960848756687,0.0887023701626388,0.576169937778896,0.171488009437418,1.90315252335129,2.03895598044832,1.30013224972365,2.44709084162552,0.313972371402056,5.97039241680807,1.68163297988273,2.73947616152849,0,1.43325506366115,0.714765441766563,3.95034029331817,2.78979420883501,0.347716544605159,0,0,0,1.38251932362818,0,0.236664001461131,0.596493833314104,0.846774100381858,2.7492824225286,0,0,1.23040974977572,0.883352102537187,0.853425474875886,0,0.102662806856247,0,0,0.701818390386317,3.18321240258189,2.85408217866165,0.79062257427272,0.439762066981716,3.47214540203349,0.231522474323834,0.218559560503957,3.76253837089218,0.490296643507811,2.12108892391463,1.57046773691956,0.594092800654172,2.113278637917,0,0.469919589899268,0.386747327841463,0.199882311849858,0.71421575442263,0.352894871715692,1.04313776695919,0.730336388246517,1.37618785021362,0.860037498908708,0.631086248772738,3.73953196050031,1.30905207102113,1.0580536810308,0,0,0,0.756998549010474,0.109265571963696,0,0.713921808193872,0,0.275684698604535,0.752122617877125,0.909344378618873,1.33982065078089,0,1.65492793379032,1.0661699095049,1.90451545170992,2.84191203278427,8.38008642994082,0.224263725161227,1.2729431655633,2.02117188958219,0.435433495793923,0.342233301085281,0.471464371102113,0.430333232356058,0.99798106963804,1.79087190944144,2.45472895518746,0,1.61685363791856,0,0.366724332548599,0,0,1.40891655513718,0.641136984606466 | |||
|short_description=p3@RHPN1 | |||
}} |
Revision as of 00:18, 23 January 2014
Short description: | p3@RHPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RHPN1_5end |
Coexpression cluster: | C4731_granulocyte_acute_osteosarcoma_thymus_smallcell_hippocampus_serous |
Association with transcript: | -22bp_to_NM_052924, uc003yyb.2_5end |
EntrezGene: | RHPN1 |
HGNC: | 19973 |
UniProt: | Q8TCX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.69e-18 | 56 |
neural rod | 1.69e-18 | 56 |
future spinal cord | 1.69e-18 | 56 |
neural keel | 1.69e-18 | 56 |
regional part of nervous system | 1.45e-17 | 53 |
regional part of brain | 1.45e-17 | 53 |
regional part of forebrain | 2.68e-15 | 41 |
forebrain | 2.68e-15 | 41 |
anterior neural tube | 2.68e-15 | 41 |
future forebrain | 2.68e-15 | 41 |
brain | 6.91e-15 | 68 |
future brain | 6.91e-15 | 68 |
central nervous system | 9.41e-15 | 81 |
brain grey matter | 4.05e-14 | 34 |
gray matter | 4.05e-14 | 34 |
telencephalon | 5.22e-14 | 34 |
cerebral hemisphere | 5.30e-14 | 32 |
nervous system | 1.22e-13 | 89 |
regional part of telencephalon | 1.30e-12 | 32 |
neurectoderm | 9.55e-12 | 86 |
regional part of cerebral cortex | 3.33e-11 | 22 |
neocortex | 6.43e-11 | 20 |
neural plate | 1.26e-10 | 82 |
presumptive neural plate | 1.26e-10 | 82 |
adult organism | 1.93e-10 | 114 |
cerebral cortex | 2.62e-09 | 25 |
pallium | 2.62e-09 | 25 |
pre-chordal neural plate | 3.63e-09 | 61 |
ecto-epithelium | 1.23e-08 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.28e-07 | 143 |