FFCP PHASE1:Hg19::chr8:74903696..74903725,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17156 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Y9,D0VAW8 | |||
|association_with_transcript=18bp_to_AB446498,GU059938_5end | |||
|description=CAGE_peak_2_at_LY96_5end | |||
|id=chr8:74903696..74903725,+ | |||
|ontology_enrichment_celltype=CL:0002009!5.04e-27!65;CL:0002194!3.67e-26!63;CL:0000576!3.67e-26!63;CL:0000040!3.67e-26!63;CL:0000559!3.67e-26!63;CL:0002057!1.33e-25!42;CL:0000557!2.44e-24!71;CL:0000766!6.61e-23!76;CL:0000839!1.10e-22!70;CL:0000860!3.72e-22!45;CL:0000048!1.91e-10!430;CL:0000763!7.18e-10!112;CL:0000049!7.18e-10!112;CL:0000723!1.40e-09!436;CL:0002087!8.15e-09!119;CL:0000034!1.11e-08!444;CL:0000738!1.16e-08!140;CL:0002031!1.72e-08!124;CL:0000134!9.06e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.90e-34;33!CL:0002057;6.90e-34;33!CL:0000473;7.00e-34;39!CL:0000234;7.00e-34;39!CL:0000576;5.18e-25;48!CL:0000766;4.81e-17;69!CL:0000235;2.67e-08;6!CL:0000763;4.88e-07;100!CL:0000115;6.76e-07;36!CL:0002138;6.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.24e-46,61;CL:0000473,1.08e-45,48;CL:0000234,1.08e-45,48;CL:0002194,5.86e-45,59;CL:0000576,5.86e-45,59;CL:0000040,5.86e-45,59;CL:0000559,5.86e-45,59;CL:0000557,2.39e-40,67;CL:0000860,9.25e-39,42;CL:0002057,9.25e-39,42;CL:0000839,4.80e-38,66;CL:0000766,4.91e-36,72;CL:0000763,2.77e-19,108;CL:0000049,2.77e-19,108;CL:0002087,2.44e-16,115;CL:0002031,9.52e-16,120;CL:0000738,1.19e-13,136;CL:0000048,8.80e-10,427;CL:0000723,3.36e-09,433;CL:0000034,1.85e-08,441;CL:0002032,1.87e-08,161;CL:0000837,1.87e-08,161;CL:0000235,2.88e-08,6;CL:0000219,5.66e-08,386;CL:0000037,7.35e-08,168;CL:0000134,1.22e-07,354;CL:0000115,1.91e-07,36;CL:0002320,2.72e-07,361;CL:0000988,4.61e-07,177;CL:0005020,8.54e-07,6;CL:0002138,8.54e-07,6;CL:0005022,8.54e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.29e-28;42!CL:0000049;2.55e-07;108!CL:0005022;6.77e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.15e-25!112;UBERON:0002371!5.47e-24!80;UBERON:0002390!4.45e-22!102;UBERON:0003061!4.45e-22!102;UBERON:0001474!9.77e-21!86;UBERON:0002405!1.14e-20!115;UBERON:0003081!4.40e-18!216;UBERON:0004765!7.50e-18!101;UBERON:0001434!7.50e-18!101;UBERON:0002204!6.21e-17!167;UBERON:0000055!4.62e-07!69;UBERON:0000480!5.90e-07!626;UBERON:0000467!7.56e-07!625;UBERON:0002384!7.87e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.33e-41,93;UBERON:0002371,1.60e-41,76;UBERON:0001474,7.69e-37,82;UBERON:0002193,6.69e-36,108;UBERON:0004765,1.26e-32,90;UBERON:0002390,5.74e-32,98;UBERON:0003061,5.74e-32,98;UBERON:0001434,3.68e-28,100;UBERON:0003081,9.68e-26,203;UBERON:0000926,6.45e-21,315;UBERON:0004120,6.45e-21,315;UBERON:0006603,6.45e-21,315;UBERON:0002204,4.93e-20,167;UBERON:0002384,3.88e-08,371 | |||
|phase1_expression=0.908391896352783,0,1.26858963686374,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,7.39557661096953,4.21886169616784,3.65155045193687,2.43966399395253,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.157421562627358,1.18009283054671,0.383829398097213,0.77408061658038,0,0.30120591877825,0,0.309868802321207,0.426507697462265,0,0.553995408531877,0.200544447470142,0.217010870715852,22.1676319497525,8.42123531649347,14.9393829227828,7.85150489409649,7.935394817465,6.79235371325885,9.0647324393217,15.6243797448294,18.8920886246013,34.5230870786581,34.3255346748995,41.3843902305024,9.3081333798887,5.80936215225443,10.8341189275473,7.9061782607894,18.2847120538757,19.1014961778322,18.3650335422542,17.9720255162612,10.8687311385837,19.1313754108295,17.5528018707036,21.7374622771674,18.5733912722294,28.9366464592481,19.9303119678584,30.4010884960659,21.9022825736485,38.6596143575108,10.8971910474006,31.6718766949306,29.7474644194431,2.95757400836718,4.03948169933583,3.56419697364239,1.90958672949042,3.30389164251314,1.76798145366788,3.42015292489498,3.18266683518544,3.65328307529268,0,0,0,0.426730222566507,0,1.72425731986345,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0.664601683750863,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,1.0843174571537,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,8.11368484136708,7.83583817846703,3.72282289452822,0.238490624305342,0.571994910780128,0,0.993812036833525,0.860234595106124,1.38856200643038,0.56530794192401,3.77549492588915,0.275118041940067,1.46296476575767,9.04458657092651,6.75955899104749,2.34304428935269,6.8480983908555,1.52054421143703,1.22031028774085,2.20597848207521,1.62028389576352,1.51809538082936,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,1.49091585508596,0.759783069987479,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0.622422070799533,0.269421344139376,0.817309515567294,0,0,0,0.624320153660641,1.1409436430889,0.747243402759005,0.469737994575059,0.161872944368132,0.140450806702248,1.63323337003915,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0.718618141816238,0.841680569770331,0.125118519871964,0.277064115484183,0,0.30648779579902,0.45071417671979,0.907457465280168,0.717558542755448,1.70845911054854,1.27159140695737,0.600182192168805,1.8549455262919,1.54584324027377,1.11670113798954,0.337552664482532,0.487185025805993,0.252433774244115,1.38074847963449,1.77810662500693,0.355009592516614,0.906768884048762,0.339121184620975,0.386521706326594,2.45471508531751,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0.301586917234893,0,0,1.03993478527958,0,1.27523445472584,0,3.46479474626577,2.31492756288305,3.04406643575357,0,0,25.3603516270019,17.0823113551644,6.53977114070404,0,0.839910640994298,0.567100388969546,0,0,0,0,0,0.829312462163088,0.432359860250884,0.37872730027914,1.77794104018073,1.14596527667483,0,1.71072446022705,0.616964956219941,2.70308752059526,2.00078502841405,0,0.43596006883328,0.07333828582095,1.29271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0.65147236858747,0,0,0.602878754119172,0.871533458600294,0,23.1085183218262,17.0767411086923,16.8667151586425,1.19812427745791,0,0,1.44781306667579,0.61642896765115,1.07436577943937,0.560425719967636,0,0,0,0,0,0,0.837581326671744,0,0.749007023947182,0,2.48649308061621,0,1.00034104211935,0.542530047399471,0.623912584592421,0.892144943985809,1.10391690523754,0.819989904948992,0,0,0,0,0,1.65078867489357,0,0.686286847621712,1.24060815673732,0.431428401637234,0.213455115606889,0,0,0,1.73675465473144,0.767309866440312,0.561320188866147,1.53766979106841,1.02341449813341,0.64341568457443,0,0.308419387605311,0.532685175939381,0.492762936082855,1.03850885836724,0.929683027679674,0,0,0.368323955743585,2.18147451512753,0.546273504020151,1.96686622439136,0,0.0770153371044148,0,0,0,1.13733384070897,2.89159298970077,0.647747748306418,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,0,0,0.824328093181778,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.870036464629098,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.890320356467374,0.826424576804891,0,0,0.10115778085555,4.18360994367557,1.5740617341532,0.6970372701606,3.69640296211307,1.06461206063404,0.869932992075073,0.37064843820784,0,0.744316738719335,0.632758849437452,0.571890581771475,0.511795582622668,0.42793898803392,0.636406495851874,0,0.719489830333259,0,0.353437207037059,0.404364963146632,0,2.52755073743389,0.975267478179181,1.46228093778771,2.11300293513511,1.36499911407986,0.989838023675989,3.39024349860728,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0,0.845086807596724,0.143411352204052,0,0,4.61189383291777,1.266645811785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| |||
|short_description=p2@LY96 | |||
}} |
Revision as of 22:34, 22 January 2014
Short description: | p2@LY96 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LY96_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_AB446498, GU059938_5end |
EntrezGene: | LY96 |
HGNC: | 17156 |
UniProt: | Q9Y6Y9D0VAW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 1.33e-41 | 93 |
bone marrow | 1.60e-41 | 76 |
bone element | 7.69e-37 | 82 |
hemolymphoid system | 6.69e-36 | 108 |
skeletal element | 1.26e-32 | 90 |
hematopoietic system | 5.74e-32 | 98 |
blood island | 5.74e-32 | 98 |
skeletal system | 3.68e-28 | 100 |
lateral plate mesoderm | 9.68e-26 | 203 |
mesoderm | 6.45e-21 | 315 |
mesoderm-derived structure | 6.45e-21 | 315 |
presumptive mesoderm | 6.45e-21 | 315 |
musculoskeletal system | 4.93e-20 | 167 |
connective tissue | 3.88e-08 | 371 |