FFCP PHASE1:Hg19::chr8:27183033..27183088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9612 | |||
|TSSclassifier=strong | |||
|UniProt=Q14289,Q6PID4 | |||
|association_with_transcript=0bp_to_ENST00000420218,NM_173175,uc003xfp.1,uc003xfq.1_5end | |||
|description=CAGE_peak_1_at_PTK2B_5end | |||
|id=chr8:27183033..27183088,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.96e-55!172;CL:0000566!1.96e-55!172;CL:0002032!4.83e-53!165;CL:0000837!4.83e-53!165;CL:0000988!3.47e-47!182;CL:0000738!1.02e-46!140;CL:0002031!3.03e-39!124;CL:0002087!1.48e-38!119;CL:0000763!3.04e-37!112;CL:0000049!3.04e-37!112;CL:0000766!2.83e-28!76;CL:0002057!2.59e-26!42;CL:0000860!1.22e-25!45;CL:0000557!4.91e-25!71;CL:0002009!1.99e-24!65;CL:0000839!4.09e-24!70;CL:0002194!2.90e-23!63;CL:0000576!2.90e-23!63;CL:0000040!2.90e-23!63;CL:0000559!2.90e-23!63;CL:0000542!1.52e-13!53;CL:0000051!1.52e-13!53;CL:0000838!1.90e-13!52;CL:0000945!1.85e-08!24;CL:0000826!1.85e-08!24;CL:0000236!3.93e-07!14;CL:0000134!4.99e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.84e-20;33!CL:0002057;6.84e-20;33!CL:0000576;1.76e-17;48!CL:0000473;5.12e-17;39!CL:0000234;5.12e-17;39!CL:0000766;5.07e-14;69!CL:0002087;1.28e-12;104!CL:0000763;2.00e-12;100!CL:0000738;1.79e-10;136!CL:0000542;1.48e-08;53!CL:0000945;1.51e-08;24!CL:0000988;4.52e-08;177!CL:0000236;6.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.90e-57,168;CL:0002032,1.01e-54,161;CL:0000837,1.01e-54,161;CL:0000988,2.79e-49,177;CL:0000738,2.90e-48,136;CL:0002031,1.15e-40,120;CL:0002087,5.34e-40,115;CL:0000763,1.04e-38,108;CL:0000049,1.04e-38,108;CL:0000766,1.12e-29,72;CL:0000473,8.46e-27,48;CL:0000234,8.46e-27,48;CL:0000860,1.18e-26,42;CL:0002057,1.18e-26,42;CL:0000557,2.47e-26,67;CL:0002009,8.35e-26,61;CL:0000839,2.26e-25,66;CL:0002194,1.32e-24,59;CL:0000576,1.32e-24,59;CL:0000040,1.32e-24,59;CL:0000559,1.32e-24,59;CL:0000542,8.17e-14,53;CL:0000051,8.17e-14,53;CL:0000838,1.03e-13,52;CL:0000945,1.48e-08,24;CL:0000826,1.48e-08,24;CL:0000236,3.29e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-19;42!CL:0000049;2.40e-11;108!CL:0000051;1.48e-08;53 | |||
|ontology_enrichment_disease=DOID:8692!3.86e-07!31;DOID:1240!5.54e-07!39;DOID:2531!5.75e-07!51;DOID:0060083!5.75e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.84e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.61e-07,31;DOID:2531,2.93e-07,51;DOID:0060083,2.93e-07,51;DOID:1240,3.19e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.24e-26!102;UBERON:0003061!6.24e-26!102;UBERON:0002193!4.03e-22!112;UBERON:0002371!2.69e-20!80;UBERON:0001474!3.01e-16!86;UBERON:0007023!2.79e-15!115;UBERON:0002405!7.94e-13!115;UBERON:0004765!2.27e-11!101;UBERON:0001434!2.27e-11!101;UBERON:0002619!8.33e-10!22;UBERON:0001950!5.45e-09!20;UBERON:0001869!2.31e-08!32;UBERON:0001893!3.12e-08!34;UBERON:0002791!8.06e-08!33;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0003080!1.39e-07!42;UBERON:0002020!3.46e-07!34;UBERON:0003528!3.46e-07!34;UBERON:0000956!7.26e-07!25;UBERON:0000203!7.26e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.18e-10;22!UBERON:0001950;4.14e-09;20!UBERON:0001869;8.90e-08;32!UBERON:0001893;1.73e-07;34!UBERON:0002791;2.97e-07;32!UBERON:0000956;3.86e-07;25!UBERON:0000203;3.86e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-27,98;UBERON:0003061,2.36e-27,98;UBERON:0002193,1.90e-23,108;UBERON:0002371,2.54e-21,76;UBERON:0002405,7.90e-20,93;UBERON:0001474,3.85e-17,82;UBERON:0007023,4.13e-15,114;UBERON:0004765,4.53e-14,90;UBERON:0001434,8.89e-11,100;UBERON:0002619,6.41e-10,22;UBERON:0001950,4.30e-09,20;UBERON:0001869,1.21e-08,32;UBERON:0001893,1.66e-08,34;UBERON:0002791,5.54e-08,32;UBERON:0002780,6.08e-08,41;UBERON:0001890,6.08e-08,41;UBERON:0003080,6.08e-08,41;UBERON:0006240,6.08e-08,41;UBERON:0003528,1.97e-07,34;UBERON:0002020,1.97e-07,34;UBERON:0000956,3.97e-07,25;UBERON:0000203,3.97e-07,25;UBERON:0000073,8.82e-07,53;UBERON:0002616,8.82e-07,53 | |||
|phase1_expression=41.786027232228,22.2664544846622,38.0576891059122,57.0417800612843,53.6353313312745,66.297727831628,30.3959853801973,6.31719873426831,8.61912573059467,4.42321085702716,15.3516256953934,19.004399375325,9.75937819445278,0.123766352960047,0.994192127183747,0,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0,36.9076749762605,29.5562122019805,32.3501311199222,160.099260677504,135.491777528316,141.192304464261,14.7107395916628,15.3615018576908,9.24385025416969,63.445637275267,27.8651695675346,51.3800768835983,147.916774078011,235.439181329946,165.796305226911,19.2567307846335,34.9805159300498,23.6969522223452,208.355676171116,170.799926547342,207.409372315583,186.408087598359,134.451899383137,155.782304560237,145.86004290733,142.937674243238,136.686728875602,189.61012440514,152.334385325783,196.368405561796,201.231060971044,139.455042679559,126.069874773692,224.971660892613,164.957519917112,210.981251513684,176.80029690008,147.603106640008,187.112665483853,180.800355665608,120.853052859213,141.380650521996,158.537907777005,141.321870891875,142.475882126557,179.803652282111,178.246375817981,163.294591919496,113.655344035825,104.388711282836,79.8799439386912,137.714901785603,131.55495812916,103.668003419617,119.135326883842,129.693673533807,100.647948724313,114.39755889986,97.7588114159215,91.6194531479461,95.1608396323311,92.4914730053189,94.8341525924897,103.784045027223,94.451321699001,132.626621802501,109.226117222995,130.355170790703,68.7290908610935,73.9871303135628,28.7088652404834,30.0965948274165,42.838173139659,39.2698863089063,45.1403537554831,41.7180501290996,31.2475551784924,50.6549493860569,53.922661132424,36.8257384343546,44.0852450221406,53.3483611617081,46.3690577406944,43.4398220849993,66.2684755552815,58.0335037350282,66.075103547592,54.4211686804762,43.6091549786232,50.1770514263889,50.5359668431145,51.7347666362594,46.7333325856377,53.6401747081346,60.2088633072543,58.5975108470777,44.6712460890736,62.1875241791202,55.5461892410176,68.7118996037902,68.9021803448089,54.1944477967891,62.4980903996671,76.7553361898666,47.2127556657925,17.0664806419773,2.01210257911091,7.92747883429888,0.361439152384566,0.50133791063589,1.59331170856906,0.795285947051099,0.973269740605272,0,0.221729397462564,0.790513071238134,25.2134720333097,22.5863078741376,17.4268688108682,4.54366351116557,5.22389211897802,7.17972986801872,24.3260436791449,24.5957811635455,21.1730775757852,0,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,0,0,3.22263453687318,2.28081631715554,0.732186172644509,0,0,0,0,0.112611480483322,0,0,0,200.306234502816,193.890132074163,20.0603263985566,4.96971951695318,2.91250176828533,12.5788721772558,13.4813211751942,3.90135220418193,10.0921968025615,3.20246987189115,0.74000264525148,2.8008993185979,0.134710672069688,0.163461903113459,1.96764655938411,0.576175924479999,1.17160715916898,0,0.570471821544449,0.448346041655403,0.352303495931295,0.161872944368132,0.140450806702248,1.83738754129404,0.368502951935304,6.50952421407322,1.18800285728205,1.97813543422845,20.9337113245746,22.2771623963034,0,0.125118519871964,1.10825646193673,0,0.30648779579902,1.20190447125277,0.453728732640084,0.89694817844431,0.640672166455702,3.81477422087211,0.900273288253207,0.721367704669072,3.09168648054755,1.30281799432113,0.675105328965065,1.75386609290158,1.51460264546469,1.56484827691909,32.0059192501248,0.355009592516614,0,1.3564847384839,14.4945639872473,9.27336810008838,14.9138389602282,0.121973706129595,1.06023814657188,1.16193942869518,1.34759371519982,1.26160425437814,0.72995471815166,7.8224766164908,10.2918550110862,0,7.89425477654364,12.271951188383,3.66751080123516,3.70886318171824,3.13314338848527,4.30146493656336,4.13970943775572,3.32178866755535,3.10112008768378,3.33576490713088,2.69323009862473,0.738155454624648,1.40241773803446,9.8777762719536,8.82052268313252,1.26755034821831,3.9313088667105,4.13552934676983,10.5951143859516,12.7907976084838,2.74508496477641,11.9627811095402,15.7362454560667,13.7724692203934,10.0921405222797,0.325808305310325,0,0,0.231860809950154,0.352226082707465,0.721832238805369,0,0,2.37061319387782,2.57545848628462,18.2200584504674,28.3145160818478,33.7392738395413,3.74935335947108,14.7824272814996,13.1850840435419,9.67232045190762,13.3691611716422,18.4023685999301,2.95597942737566,10.91800581764,26.5379987892188,61.3951001556256,31.3081234897422,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0.285826432630578,0.448524337381443,0.43596006883328,0.2933531432838,3.23179289394444,221.746996428167,1.690605505112,0,0,0,0,0.266422179016099,3.86040582876998,60.7736198038416,11.5253647149308,0,2.48774364119782,7.12756685640086,23.2108320335881,18.3022026306062,17.49527345686,30.4059451602976,17.0767411086923,25.3000727379638,0.958499421966331,3.44585807502342,0,6.22559618670591,7.60262393436419,1.96967059563885,19.7269853428608,79.0093348409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| |||
|short_description=p1@PTK2B | |||
}} |
Revision as of 21:22, 22 January 2014
Short description: | p1@PTK2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTK2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420218, NM_173175, uc003xfp.1, uc003xfq.1_5end |
EntrezGene: | PTK2B |
HGNC: | 9612 |
UniProt: | Q14289Q6PID4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.90e-57 | 168 |
hematopoietic oligopotent progenitor cell | 1.01e-54 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-54 | 161 |
hematopoietic cell | 2.79e-49 | 177 |
leukocyte | 2.90e-48 | 136 |
hematopoietic lineage restricted progenitor cell | 1.15e-40 | 120 |
nongranular leukocyte | 5.34e-40 | 115 |
myeloid cell | 1.04e-38 | 108 |
common myeloid progenitor | 1.04e-38 | 108 |
myeloid leukocyte | 1.12e-29 | 72 |
defensive cell | 8.46e-27 | 48 |
phagocyte | 8.46e-27 | 48 |
classical monocyte | 1.18e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-26 | 42 |
granulocyte monocyte progenitor cell | 2.47e-26 | 67 |
macrophage dendritic cell progenitor | 8.35e-26 | 61 |
myeloid lineage restricted progenitor cell | 2.26e-25 | 66 |
monopoietic cell | 1.32e-24 | 59 |
monocyte | 1.32e-24 | 59 |
monoblast | 1.32e-24 | 59 |
promonocyte | 1.32e-24 | 59 |
lymphocyte | 8.17e-14 | 53 |
common lymphoid progenitor | 8.17e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.03e-13 | 52 |
lymphocyte of B lineage | 1.48e-08 | 24 |
pro-B cell | 1.48e-08 | 24 |
B cell | 3.29e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.36e-27 | 98 |
blood island | 2.36e-27 | 98 |
hemolymphoid system | 1.90e-23 | 108 |
bone marrow | 2.54e-21 | 76 |
immune system | 7.90e-20 | 93 |
bone element | 3.85e-17 | 82 |
adult organism | 4.13e-15 | 114 |
skeletal element | 4.53e-14 | 90 |
skeletal system | 8.89e-11 | 100 |
regional part of cerebral cortex | 6.41e-10 | 22 |
neocortex | 4.30e-09 | 20 |
cerebral hemisphere | 1.21e-08 | 32 |
telencephalon | 1.66e-08 | 34 |
regional part of telencephalon | 5.54e-08 | 32 |
regional part of forebrain | 6.08e-08 | 41 |
forebrain | 6.08e-08 | 41 |
anterior neural tube | 6.08e-08 | 41 |
future forebrain | 6.08e-08 | 41 |
brain grey matter | 1.97e-07 | 34 |
gray matter | 1.97e-07 | 34 |
cerebral cortex | 3.97e-07 | 25 |
pallium | 3.97e-07 | 25 |
regional part of nervous system | 8.82e-07 | 53 |
regional part of brain | 8.82e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.61e-07 | 31 |
hematologic cancer | 2.93e-07 | 51 |
immune system cancer | 2.93e-07 | 51 |
leukemia | 3.19e-07 | 39 |