FFCP PHASE1:Hg19::chr8:22409193..22409215,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |||
|TSSclassifier=strong | |||
|UniProt=O60504 | |||
|association_with_transcript=0bp_to_ENST00000240123_5end | |||
|coexpression_cluster_id=C2923 | |||
|description=CAGE_peak_8_at_SORBS3_5end | |||
|id=chr8:22409193..22409215,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-40!115;UBERON:0001049!1.81e-15!57;UBERON:0005068!1.81e-15!57;UBERON:0006241!1.81e-15!57;UBERON:0007135!1.81e-15!57;UBERON:0002616!6.64e-15!59;UBERON:0003075!9.69e-13!86;UBERON:0007284!9.69e-13!86;UBERON:0005743!3.96e-12!86;UBERON:0002346!4.06e-12!90;UBERON:0003080!1.91e-11!42;UBERON:0000073!2.99e-11!94;UBERON:0001016!2.99e-11!94;UBERON:0000153!3.80e-11!129;UBERON:0007811!3.80e-11!129;UBERON:0001017!4.48e-11!82;UBERON:0000955!5.24e-11!69;UBERON:0006238!5.24e-11!69;UBERON:0002780!7.74e-11!41;UBERON:0001890!7.74e-11!41;UBERON:0006240!7.74e-11!41;UBERON:0000033!9.85e-11!123;UBERON:0002020!6.71e-09!34;UBERON:0003528!6.71e-09!34;UBERON:0001893!6.99e-09!34;UBERON:0002791!1.54e-08!33;UBERON:0004121!2.21e-08!169;UBERON:0000924!3.77e-08!173;UBERON:0006601!3.77e-08!173;UBERON:0001869!5.26e-08!32;UBERON:0000062!7.03e-08!511;UBERON:0003056!8.54e-08!61;UBERON:0000475!2.17e-07!365;UBERON:0000481!5.40e-07!347;UBERON:0000468!8.94e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.10e-13;114!UBERON:0000073;3.47e-09;53!UBERON:0002616;3.47e-09;53!UBERON:0001893;1.34e-08;34!UBERON:0003528;4.96e-08;34!UBERON:0002020;4.96e-08;34!UBERON:0002780;6.15e-08;41!UBERON:0001890;6.15e-08;41!UBERON:0002791;1.50e-07;32!UBERON:0001869;1.83e-07;32!UBERON:0002619;2.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.69e-52,114;UBERON:0001049,1.96e-15,56;UBERON:0005068,1.96e-15,56;UBERON:0006241,1.96e-15,56;UBERON:0007135,1.96e-15,56;UBERON:0000073,7.41e-14,53;UBERON:0002616,7.41e-14,53;UBERON:0003075,1.84e-13,82;UBERON:0007284,1.84e-13,82;UBERON:0010314,1.37e-12,132;UBERON:0002346,3.43e-12,86;UBERON:0010371,1.53e-10,104;UBERON:0001017,2.09e-10,81;UBERON:0000955,2.19e-10,68;UBERON:0006238,2.19e-10,68;UBERON:0002780,2.74e-10,41;UBERON:0001890,2.74e-10,41;UBERON:0003080,2.74e-10,41;UBERON:0006240,2.74e-10,41;UBERON:0003528,1.19e-09,34;UBERON:0002020,1.19e-09,34;UBERON:0001893,1.26e-09,34;UBERON:0001016,2.73e-09,89;UBERON:0004121,1.06e-08,171;UBERON:0000924,1.06e-08,171;UBERON:0006601,1.06e-08,171;UBERON:0002791,1.56e-08,32;UBERON:0001869,1.96e-08,32;UBERON:0003056,2.33e-07,61;UBERON:0002619,3.20e-07,22;UBERON:0011216,8.91e-07,223 | |||
|phase1_expression=4.72363786103447,5.56661362116556,9.72585388262201,5.00366491765652,1.34088328328186,3.48935409640147,0,1.26343974685366,2.87304191019822,0,0,0,0,4.57935505952172,6.2965501388304,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.547497700291537,1.00434111675842,0,0,0,0,0,0.154816123316076,0,0,0,0.774672005803016,0,0,0,0.200544447470142,0,1.56740831967947,0.32389366601898,2.31818010870768,0.145398238779565,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0,1.05353633910031,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.02290049474824,1.44575660953827,5.0133791063589,3.76600949298142,0,2.91980922181582,0,0,0.175669571386252,3.92937226493138,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0,3.42332138939743,0.67355336034844,0.326923806226917,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,1.1409436430889,0.298897361103602,0.117434498643765,0.647491777472526,0.280901613404497,2.85815839756851,0.491337269247072,16.5321249881225,4.75201142912821,9.1488763833066,0,0,0.505008341862199,0.750711119231785,0.277064115484183,0.438977620880838,1.5324389789951,9.01428353439581,0,0.179389635688862,0.640672166455702,0.423863802319124,0,0.309157587715317,1.54584324027377,0.744467425326359,0.506328996723799,0,0,0.736399189138395,3.71785930683267,0.355009592516614,0,0.508681776931463,0,0,0,0.121973706129595,0.265059536642971,0.69716365721711,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,6.96551892047969,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.95484983186195,0,0,1.27523445472584,0,0,0,0,0,0,0.738651018262192,0.936017060556951,1.0404181360211,0,0,0,0,0,0,0,0.088048434013226,0.829312462163088,0.144119953416961,1.13618190083742,0.126995788584338,1.52795370223311,1.17217447210047,0,0.205654985406647,0.901029173531752,1.14330573052231,0.672786506072164,0.43596006883328,0.1466765716419,0,39.3422090437071,0.845302752556,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,1.62868092146868,0.355391948742546,0,0,0,0.099972991182057,4.86495122564762,1.00451418286425,0,9.58499421966331,21.8237678084816,0,0.434343920002738,0.821905290201534,0.895304816199478,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0,0,0,0,5.27573414392302,16.5056271949693,0.542530047399471,1.24782516918484,0.178428988797162,0.157702415033935,0.819989904948992,1.20378439891088,4.5481500811197,4.1389228517002,0,0.553107505625109,4.69171518127647,9.00685324328607,2.05886054286514,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,1.48864684691266,1.2276957863045,0.841980283299221,3.07533958213682,0,1.12597744800525,2.96836132889982,0.308419387605311,0.355123450626254,1.14978018419333,0,0.813472649219715,0,0,0,0,0.182091168006717,0.786746489756545,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.769350375349168,1.31205858279882,0.650756789328606,2.47298427954533,0,0,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.551346289938122,1.6113036730241,1.74020032697074,0.511359764496605,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,2.21465597303108,0.571890581771475,1.27948895655667,5.56320684444097,0.318203247925937,0,0.539617372749944,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0.578775534266688,3.9353685122798,0.202910376962704,0,0,0,0,0,0,8.02209014131124,8.23237232399755,0.379473173765715,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,4.08766985276581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8739978711711,0,0,0,0,0,0,0.994147647766298,4.07941307590487,0,0,0,21.9172787076177,1.10513566212459,5.79445320064835,0,0.246169610922139,0.311039587661807,0,0,0.511572370226872,9.56841034678256,0,0,3.87733098438087,2.22643435588443,0,0,0,13.0499923578263,0.1137934482855,0,0,3.10269035917318,0,1.73624994933292,0,3.61789315876224,1.52581736317083,2.65390223834939,3.25102380848902,2.63262476584767,0,0,16.0056537687898,0,0,0,0,2.55200927785536,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,4.97630965539252,2.21143911258348,3.05515072466813,0,0,0,4.04406797884062,15.248975298677,1.63985112007737,0,0,0,1.97292201424695,0,0.61214552326098,14.0906072571528,0,0,0,0,0,0,0,0,0.173559738335131,0,0,8.91106008034354,0,0,0,0,4.84945082442097,0.176512253383001,5.19755703795225,0,0,1.89932387867636,0,0,9.60538476327087,0,0.144090417154106,0,1.37275998289572,0,0,0,0,0,0,0,0.600420288709789,4.92859364011175,2.55493176133945,0,0,11.4505784521624,8.02061484040893,13.6395874669595,1.99679000498991,9.01374701086799,5.80245789348869,7.18863155607971,0.360299883542404,0,0.315132729228895,0.164831716762333,0.404421263125109,0,0,2.38568906942791,5.72054305668618,0,0,0,0,0,2.85522916292716,0,2.83700546277113,3.30463905250488,0,0,0,5.71756261098694,2.64836788146173,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,1.32506888912221,2.84422503995411,3.43804764530994,0,0,2.66968531419237,3.45849471219265,4.55662960881915,5.45782623993146,0,0.243585196761792,0,3.80812462358632,2.506898940227,0.612691153526923,0.327872630709804,1.88464915500281,0,1.22026264901963,3.3801551290755,1.72022758707021,5.65738162837947,4.65723022060376,0,0,0.151649117541648,2.85465333544967,0,0,0.579684114443301,0.447764408660622,0.934853239388898,0,0.568209015825267,4.77979013329893,4.44905610798268,2.51724075236616,1.05861646634267,0.777186002913902,0.295710299979268,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0.345430341731199,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0.567515953566836,1.28874165176289,0,0,0.895260599125562,0,0,0.109209638192014,0,0.637724760305049,0,0,1.59002175326709,1.57723490002507,0,0.352675943690684,0,3.0187735795336,0,3.67157875831448,2.2562800066483,0.252071696221718,2.76629009856872,3.22951291263702,1.42769420259154,0,0,0,0,1.52552838186867,0.690359926060101,7.16098399618589,7.52103283492572,0,2.34454203369928,0,0,0.147856086217045,2.29627787702542,1.56215619722769,2.68692835451539,2.40980078736846,1.09394961803644,0.548257766857182,14.8863353516788,0.351742488719241,0.127762427639595,2.14280734351315,0.672567444437648,0.606965604236632,0.91064876540519,7.62840383398694,0,0,2.7867590520501,2.03895598044832,0.118193840883968,0,7.61383000649986,2.35673384874003,0.280272163313789,8.21842848458546,0.431855182437243,0.9555033757741,8.00537294778551,0,0,1.56472445072321,4.81026818838152,0,3.24365106478505,3.45629830907046,1.29068207646083,0,0.255640214277473,4.23387050190929,0,0,0,1.11855431797792,0.196300467230486,0.243835849964539,11.6537190693821,11.4982343678997,13.9177731760584,4.85710993059139,0.935757853848423,0.596852325484105,0,0,0.109940516745429,0,2.31522474323834,1.96703604453562,0,7.84474629612498,0,2.94462700672418,2.67341760294377,2.113278637917,0.169927114687817,0.939839179798536,3.48072595057317,0,0,0,0,5.84269110597214,2.2936464170227,3.29681041248338,0.157771562193185,3.05961705859116,0.872701380680755,3.1741610430924,1.48798007266701,6.00828317220844,6.92202499398063,0,0,2.4072715192173,0,0,0.275684698604535,0,8.71455029509753,3.7514978221865,3.31667775783512,3.20642287171875,7.67642334843531,4.52322419781107,0.322944549180031,0.993195428733726,0.224263725161227,3.05506359735192,3.03175783437329,17.8527733275508,13.6893320434112,2.28996980249598,5.80949863680678,7.98384855710432,0,0,0,0,7.03922827210363,10.023798422995,4.88275413978886,21.3042167739364,7.44713036286797,0.320568492303233 | |||
|short_description=p8@SORBS3 | |||
}} |
Revision as of 21:04, 22 January 2014
Short description: | p8@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SORBS3_5end |
Coexpression cluster: | C2923_Mesenchymal_Multipotent_aorta_vagina_penis_breast_Fibroblast |
Association with transcript: | 0bp_to_ENST00000240123_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | O60504 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.69e-52 | 114 |
neural tube | 1.96e-15 | 56 |
neural rod | 1.96e-15 | 56 |
future spinal cord | 1.96e-15 | 56 |
neural keel | 1.96e-15 | 56 |
regional part of nervous system | 7.41e-14 | 53 |
regional part of brain | 7.41e-14 | 53 |
neural plate | 1.84e-13 | 82 |
presumptive neural plate | 1.84e-13 | 82 |
structure with developmental contribution from neural crest | 1.37e-12 | 132 |
neurectoderm | 3.43e-12 | 86 |
ecto-epithelium | 1.53e-10 | 104 |
central nervous system | 2.09e-10 | 81 |
brain | 2.19e-10 | 68 |
future brain | 2.19e-10 | 68 |
regional part of forebrain | 2.74e-10 | 41 |
forebrain | 2.74e-10 | 41 |
anterior neural tube | 2.74e-10 | 41 |
future forebrain | 2.74e-10 | 41 |
brain grey matter | 1.19e-09 | 34 |
gray matter | 1.19e-09 | 34 |
telencephalon | 1.26e-09 | 34 |
nervous system | 2.73e-09 | 89 |
ectoderm-derived structure | 1.06e-08 | 171 |
ectoderm | 1.06e-08 | 171 |
presumptive ectoderm | 1.06e-08 | 171 |
regional part of telencephalon | 1.56e-08 | 32 |
cerebral hemisphere | 1.96e-08 | 32 |
pre-chordal neural plate | 2.33e-07 | 61 |
regional part of cerebral cortex | 3.20e-07 | 22 |
organ system subdivision | 8.91e-07 | 223 |