FFCP PHASE1:Hg19::chr8:19540485..19540506,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=weak | |||
|UniProt=Q8TDX6 | |||
|association_with_transcript=-213bp_to_ENST00000311540,ENST00000397998_5end | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_20_at_CSGALNACT1_5end | |||
|id=chr8:19540485..19540506,- | |||
|ontology_enrichment_celltype=CL:0002541!2.04e-11!3;CL:0000039!2.74e-10!7;CL:0000586!2.74e-10!7;CL:0002537!5.00e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.84e-34;1!UBERON:0003124;2.58e-34;1!UBERON:0010226;5.97e-34;1 | |||
|ontology_enrichment_disease=DOID:114!8.55e-17!2;DOID:178!4.19e-09!1;DOID:326!4.19e-09!1;DOID:3978!4.19e-09!1;DOID:3394!4.19e-09!1;DOID:5844!4.19e-09!1;DOID:1287!7.57e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;9.86e-18;2!DOID:1287;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.07e-18,2;DOID:1287,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.30e-14!14;UBERON:0000158!8.30e-14!14;UBERON:0007100!1.26e-13!27;UBERON:0004151!8.35e-12!3;UBERON:0003978!1.49e-11!3;UBERON:0009751!1.49e-11!3;UBERON:0000946!1.49e-11!3;UBERON:0002523!1.49e-11!3;UBERON:0005983!1.49e-11!3;UBERON:0002165!1.49e-11!3;UBERON:0002062!1.49e-11!3;UBERON:0007280!1.49e-11!3;UBERON:0000476!2.04e-11!3;UBERON:0000920!2.04e-11!3;UBERON:0003124!9.05e-11!7;UBERON:0002079!1.60e-09!1;UBERON:0002084!1.89e-09!1;UBERON:0002082!1.89e-09!1;UBERON:0004706!1.89e-09!1;UBERON:0002146!2.60e-09!1;UBERON:0005623!2.60e-09!1;UBERON:0002135!2.82e-09!1;UBERON:0001000!4.54e-09!1;UBERON:0005352!4.54e-09!1;UBERON:0007023!4.56e-09!115;UBERON:0001282!8.49e-09!1;UBERON:0009842!8.49e-09!1;UBERON:0003704!8.49e-09!1;UBERON:0001171!8.49e-09!1;UBERON:0001172!8.49e-09!1;UBERON:0002581!1.07e-08!1;UBERON:0002394!2.22e-08!4;UBERON:0003928!2.22e-08!4;UBERON:0000478!5.63e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;8.73e-45;3!UBERON:0002079;1.84e-34;1!UBERON:0002084;5.97e-34;1!UBERON:0002082;5.97e-34;1!UBERON:0002081;5.48e-18;2!UBERON:0007100;1.18e-12;25!UBERON:0001987;1.22e-09;4!UBERON:0000948;5.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,6.25e-45,3;UBERON:0002079,1.84e-34,1;UBERON:0002084,3.61e-34,1;UBERON:0002082,3.61e-34,1;UBERON:0010226,3.61e-34,1;UBERON:0002081,5.48e-18,2;UBERON:0010227,5.48e-18,2;UBERON:0007100,8.31e-12,27;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.23056390438806,0.0897576444097721,0.325942115766024,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0.399358000997982,1.71690419254628,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39496399439125,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@CSGALNACT1 | |||
}} |
Revision as of 20:56, 22 January 2014
Short description: | p20@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_CSGALNACT1_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -213bp_to_ENST00000311540, ENST00000397998_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | Q8TDX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 6.25e-45 | 3 |
left cardiac atrium | 1.84e-34 | 1 |
heart left ventricle | 3.61e-34 | 1 |
cardiac ventricle | 3.61e-34 | 1 |
future cardiac ventricle | 3.61e-34 | 1 |
cardiac atrium | 5.48e-18 | 2 |
future cardiac atrium | 5.48e-18 | 2 |
primary circulatory organ | 8.31e-12 | 27 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.07e-18 | 2 |
cardiovascular system disease | 1.44e-09 | 4 |