FFCP PHASE1:Hg19::chr8:13372410..13372429,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10395 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |||
|TSSclassifier=strong | |||
|UniProt=E9PF76,Q86UC6,Q96QB1 | |||
|association_with_transcript=0bp_to_NM_024767,NM_182643,uc003wwm.2,uc003wwn.2,uc011kxy.1_5end | |||
|coexpression_cluster_id=C1095 | |||
|description=CAGE_peak_9_at_DLC1_5end | |||
|id=chr8:13372410..13372429,- | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-10!180;CL:0000057!3.65e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002552;3.33e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,3.17e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-28!115;UBERON:0002616!4.98e-14!59;UBERON:0001049!4.56e-13!57;UBERON:0005068!4.56e-13!57;UBERON:0006241!4.56e-13!57;UBERON:0007135!4.56e-13!57;UBERON:0002346!5.45e-11!90;UBERON:0003080!8.10e-11!42;UBERON:0000475!1.49e-10!365;UBERON:0002780!3.53e-10!41;UBERON:0001890!3.53e-10!41;UBERON:0006240!3.53e-10!41;UBERON:0000073!3.58e-10!94;UBERON:0001016!3.58e-10!94;UBERON:0003075!4.37e-10!86;UBERON:0007284!4.37e-10!86;UBERON:0000955!5.93e-10!69;UBERON:0006238!5.93e-10!69;UBERON:0000481!1.17e-09!347;UBERON:0000153!1.32e-09!129;UBERON:0007811!1.32e-09!129;UBERON:0000468!2.10e-09!659;UBERON:0000479!4.80e-09!787;UBERON:0001017!5.42e-09!82;UBERON:0000477!5.59e-09!286;UBERON:0001893!6.59e-09!34;UBERON:0002020!7.91e-09!34;UBERON:0003528!7.91e-09!34;UBERON:0000033!9.03e-09!123;UBERON:0005743!1.26e-08!86;UBERON:0002791!1.93e-08!33;UBERON:0001869!4.72e-08!32;UBERON:0000924!5.69e-08!173;UBERON:0006601!5.69e-08!173;UBERON:0002385!6.54e-08!63;UBERON:0001015!6.54e-08!63;UBERON:0000383!6.54e-08!63;UBERON:0000914!7.85e-08!83;UBERON:0002329!7.85e-08!83;UBERON:0003077!7.85e-08!83;UBERON:0003059!7.85e-08!83;UBERON:0007282!7.85e-08!83;UBERON:0009618!7.85e-08!83;UBERON:0007285!7.85e-08!83;UBERON:0004111!2.02e-07!241;UBERON:0000119!2.68e-07!312;UBERON:0004121!2.74e-07!169;UBERON:0000467!3.30e-07!625;UBERON:0001134!3.89e-07!61;UBERON:0002036!3.89e-07!61;UBERON:0003082!3.89e-07!61;UBERON:0000480!4.21e-07!626;UBERON:0000483!5.06e-07!309;UBERON:0004290!8.93e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.11e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-20,114;UBERON:0003075,4.10e-09,82;UBERON:0007284,4.10e-09,82;UBERON:0001049,5.28e-09,56;UBERON:0005068,5.28e-09,56;UBERON:0006241,5.28e-09,56;UBERON:0007135,5.28e-09,56;UBERON:0010314,1.31e-08,132;UBERON:0002346,2.51e-08,86;UBERON:0004121,4.33e-08,171;UBERON:0000924,4.33e-08,171;UBERON:0006601,4.33e-08,171;UBERON:0001016,4.33e-08,89;UBERON:0000073,6.65e-08,53;UBERON:0002616,6.65e-08,53;UBERON:0002780,1.59e-07,41;UBERON:0001890,1.59e-07,41;UBERON:0003080,1.59e-07,41;UBERON:0006240,1.59e-07,41;UBERON:0000955,1.66e-07,68;UBERON:0006238,1.66e-07,68;UBERON:0011216,2.88e-07,223 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.845726424575827,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0.286235987131057,0,0.87879847716362,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,2.1686349143074,1.50401373190767,1.73815822752988,3.1811437882044,0.973269740605272,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0.367663080345869,0,1.07159673940896,0.22452937262617,0.337834441449967,0,0.949265659568129,0.366403487860815,0,0,0,0,0.759783069987479,1.05927344650575,1.14734648299525,0,0.560677600142307,0,0,1.55605517699883,0.134710672069688,0.326923806226917,1.05950199351452,1.15235184896,0.937285727335186,0.312160076830321,0.570471821544449,0,0.469737994575059,0.161872944368132,0.280901613404497,2.04154171254893,1.22834317311768,1.96318984233954,1.18800285728205,1.48360157567134,0,0,2.18836948140286,1.25118519871964,2.77064115484183,0,0.919463387397059,0.300476117813194,0.453728732640084,0.538168907066586,0.427114777637135,0.211931901159562,1.50045548042201,0.92747276314595,0,0.558350568994769,0.843881661206331,0.389748020644795,1.7670364197088,0.276149695926898,2.90962902273861,2.13005755509969,0.806016785821122,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,1.3032332212413,0,0,0.115930404975077,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,1.12131084345361,0,0.7333828582095,0.646358578788889,0,0,1.86156681609409,0,0.771622122786426,0,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,1.45579603071565,1.07057393278297,1.89242898040722,1.28855556491985,0.601892199455438,0,0,0.664225598535437,0.368738337083406,1.73767228936166,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.965123526861645,0,0.462629081407967,0.532685175939381,1.8067974323038,1.55776328755086,0.464841513839837,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0.96670718292122,1.07834031980251,1.84204409671355,0.413509717453592,3.11518710117994,1.16013355131383,0.426133137080504,1.4245125703478,0,0,0,0,0.464845549297286,2.20368642781448,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0.286249773483982,1.86079184679834,1.58189712359363,0.762520775695299,0,0.855877976067841,0.318203247925937,0,0.359744915166629,1.37268514868027,0.942499218765491,0,0,0.421258456238981,0.48763373908959,0.974853958525138,0,1.22849920267187,0.565621727814851,1.13008116620243,0,0.66343897524122,0.876901770507525,1.15755106853338,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.294747123039363,0.35667105148125,0.709522128141196,2.11107635297664,1.97576935775941,0,0,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.76493350141038,0,0.445773537109913,0,0,0.593929361665277,0,0,1.96937182974718,0,0,0,2.78947183551498,0.828851746593443,0,0,0,0.622079175323615,0,0,0,1.479651084554,0,0,0,0.278304294485554,0,0,0,2.89999830173917,0,0,0,0,0.291604613383254,0,0.885741385813839,1.08536794762867,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,3.69361240818226,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,3.66618086960175,2.6686901581256,0.988511511572023,0.522109747527277,0.606610196826093,4.01288823649394,0.468528891450678,0,0,0,0.789168805698781,3.62972148145992,0.61214552326098,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.84279131327997,0,2.71176888936639,0,0,1.64608069485285,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,2.19048606227189,0,0,0,3.90995361781156,4.81236890424536,0.717873024576814,0.798716001995964,2.14613024068285,1.11585728720936,15.452198671947,0.360299883542404,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,1.03274246318642,0,0.709251365692784,3.72427575758487,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0.679872549120754,0.293104467356165,0,0.129282956361551,1.98348902614035,0,0,1.49502377594773,6.9169894243853,0,0.992332043623902,0,0,0,1.08803560673895,3.7603484103405,2.45076461410769,1.31149052283922,0,0,0.976210119215705,1.1267183763585,1.14681839138014,0.887432412294818,1.30402446176905,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,0.554805861502613,0.757612021100357,0.50313580350515,0.889811221596536,0,0.604923695052956,2.17612080815893,0.591420599958536,0.63718706865481,0,0.621051827505038,0.829412415681711,1.06336685823198,0,0,0,0.406870733204662,0.54554597760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| |||
|short_description=p9@DLC1 | |||
}} |
Revision as of 20:46, 22 January 2014
Short description: | p9@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DLC1_5end |
Coexpression cluster: | C1095_heart_skin_lung_neuroblastoma_skeletal_adipose_rectum |
Association with transcript: | 0bp_to_NM_024767, NM_182643, uc003wwm.2, uc003wwn.2, uc011kxy.1_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | E9PF76Q86UC6Q96QB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 3.17e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-20 | 114 |
neural plate | 4.10e-09 | 82 |
presumptive neural plate | 4.10e-09 | 82 |
neural tube | 5.28e-09 | 56 |
neural rod | 5.28e-09 | 56 |
future spinal cord | 5.28e-09 | 56 |
neural keel | 5.28e-09 | 56 |
structure with developmental contribution from neural crest | 1.31e-08 | 132 |
neurectoderm | 2.51e-08 | 86 |
ectoderm-derived structure | 4.33e-08 | 171 |
ectoderm | 4.33e-08 | 171 |
presumptive ectoderm | 4.33e-08 | 171 |
nervous system | 4.33e-08 | 89 |
regional part of nervous system | 6.65e-08 | 53 |
regional part of brain | 6.65e-08 | 53 |
regional part of forebrain | 1.59e-07 | 41 |
forebrain | 1.59e-07 | 41 |
anterior neural tube | 1.59e-07 | 41 |
future forebrain | 1.59e-07 | 41 |
brain | 1.66e-07 | 68 |
future brain | 1.66e-07 | 68 |
organ system subdivision | 2.88e-07 | 223 |