FFCP PHASE1:Hg19::chr8:11706585..11706619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2527 | |||
|TSSclassifier=weak | |||
|UniProt=F5H2P9 | |||
|association_with_transcript=-373bp_to_ENST00000420692,ENST00000540571,uc003wul.2_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_2_at_CTSB_5end | |||
|id=chr8:11706585..11706619,- | |||
|ontology_enrichment_celltype=CL:0002194!6.18e-12!63;CL:0000576!6.18e-12!63;CL:0000040!6.18e-12!63;CL:0000559!6.18e-12!63;CL:0002009!9.96e-12!65;CL:0002057!1.02e-10!42;CL:0000839!7.14e-09!70;CL:0000860!1.06e-08!45;CL:0000557!1.19e-08!71;CL:0002371!3.23e-08!591;CL:0000057!1.43e-07!75;CL:0000055!2.92e-07!180;CL:0000222!4.59e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.38e-16;39!CL:0000234;4.38e-16;39!CL:0000860;1.87e-14;33!CL:0002057;1.87e-14;33!CL:0000576;3.46e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.53e-16,59;CL:0000576,3.53e-16,59;CL:0000040,3.53e-16,59;CL:0000559,3.53e-16,59;CL:0000473,1.28e-15,48;CL:0000234,1.28e-15,48;CL:0002009,5.36e-15,61;CL:0000839,2.04e-12,66;CL:0000557,5.87e-12,67;CL:0000860,1.62e-11,42;CL:0002057,1.62e-11,42;CL:0000766,6.70e-10,72;CL:0000048,4.54e-09,427;CL:0000723,1.17e-08,433;CL:0000057,9.22e-08,76;CL:0000034,1.38e-07,441;CL:0000222,2.02e-07,121;CL:0002320,4.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.51e-15!659;UBERON:0000467!7.32e-14!625;UBERON:0000480!1.02e-13!626;UBERON:0003081!1.15e-11!216;UBERON:0000926!3.19e-10!448;UBERON:0004120!3.19e-10!448;UBERON:0006603!3.19e-10!448;UBERON:0002204!3.99e-10!167;UBERON:0000922!2.58e-08!612;UBERON:0002050!2.60e-08!605;UBERON:0005423!2.60e-08!605;UBERON:0000923!3.45e-08!604;UBERON:0005291!3.45e-08!604;UBERON:0006598!3.45e-08!604;UBERON:0002532!3.45e-08!604;UBERON:0002405!3.53e-08!115;UBERON:0002371!5.89e-08!80;UBERON:0000062!1.33e-07!511;UBERON:0004765!2.78e-07!101;UBERON:0001434!2.78e-07!101;UBERON:0003102!8.98e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.81e-17,315;UBERON:0004120,2.81e-17,315;UBERON:0006603,2.81e-17,315;UBERON:0002204,1.36e-13,167;UBERON:0003081,1.55e-12,203;UBERON:0002371,2.11e-11,76;UBERON:0001434,2.47e-11,100;UBERON:0004765,7.13e-11,90;UBERON:0001474,8.42e-10,82;UBERON:0002405,1.10e-09,93;UBERON:0003102,1.63e-08,99;UBERON:0002193,1.30e-07,108;UBERON:0002199,2.38e-07,46;UBERON:0002416,2.38e-07,46;UBERON:0002390,7.77e-07,98;UBERON:0003061,7.77e-07,98;UBERON:0002384,8.47e-07,371 | |||
|phase1_expression=1.09007027562334,8.77812147953031,0.845726424575827,5.00366491765652,5.81049422755474,5.23403114460221,0,1.89515962028049,2.08948502559871,0.491467873003018,1.39560233594486,0.218441372130172,2.37390280405608,0.247532705920093,1.65698687863958,6.05092631806598,6.02694528023977,2.19093027116212,4.39139518911456,0.246242116153576,1.63200552995402,1.25381888591235,0,0.958120975510189,0.753255837568817,0.152826811495903,0,0,0,0,0.154816123316076,1.83884244895785,1.8072355126695,4.80680213216824,0,0,0,0,1.00272223735071,0.868043482863407,6.49354875295781,9.06902264853143,5.40908692031792,4.65274364094607,4.91238726795452,3.88134497900506,5.34586784883075,9.45686142450199,4.02618282163635,6.32923263108731,4.86705342405291,3.54723344832878,5.86067657252252,6.45484683583826,2.70852973188684,8.28266293987461,12.5536829026609,4.94391665779186,12.549439587207,4.17207735198922,12.1474053901818,5.93732340336089,3.78980949481101,3.83602275479425,7.54544020434318,5.10646702222026,3.11411124497787,5.52747063564835,8.34372669472322,2.6062661364614,4.84319602106695,1.47311054395026,1.89877432464531,2.5350634357433,1.91343869968539,0.419317291016752,1.01095768031846,1.05123824989054,0.964353520182481,0,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.896639238079726,0.520237390239513,0.493313713811028,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0,0,7.37770945674,0.383587685530591,0.722878304769133,1.00267582127178,2.462390822334,1.5905718941022,2.43317435151318,1.03988298880475,1.55210578223795,0.702678285545008,0.916853528483988,0.364295288292542,2.59549109949101,4.86821090482025,10.0995247633575,39.2225983530652,0.238490624305342,0,0,1.19257444420023,2.58070378531837,1.04142150482278,0.56530794192401,2.09749718104953,3.02629846134074,2.50793959844173,1.03366703667732,1.06729878806013,1.67360306382335,1.61131726843659,3.04108842287405,3.90499292077071,1.10298924103761,10.5318453224629,0.446498641420399,0.673588117878509,0.225222960966644,1.53316637465883,0,3.48083313467774,0,0,1.3082821564276,3.47880366186723,0.886413581652058,0.662045904066094,7.74458876021797,4.25602058638028,2.24271040056923,2.1349799145941,2.71334303258876,0,2.69421344139376,1.9615428373615,0.151357427644931,1.15235184896,0,8.42832207441865,2.85235910772225,8.36912611090086,2.11382097558777,1.78060238804945,1.54495887372473,1.63323337003915,3.19369225010597,2.78979609174567,2.37600571456411,5.93440630268536,0,3.59309070908119,0.336672227908132,1.7516592782075,0.277064115484183,0,2.75839016219118,5.85928429735728,0.340296549480063,2.87023417102179,2.77624605464138,2.11931901159562,5.40163972951924,1.95799805553034,1.8034837803194,2.04728541964749,1.85653965465393,1.07180705677318,1.26216887122057,2.02509777013059,1.2931684545505,5.68015348026583,2.01504196455281,1.86516651541536,2.89891279744945,3.00020732649918,3.72845974005705,0.121973706129595,0.132529768321485,0.348581828608555,0.518305275076852,0.504641701751257,0,7.8224766164908,5.78916844373597,2.76269842704961,3.71494342425583,8.66255378003503,0,0.505754070234305,0,0,0.217879444092406,0,0,0,0,5.90524363699719,4.20725321410337,2.057870056657,7.3504355692771,2.53510069643662,3.9313088667105,1.77236972004421,0,0.614942192715568,0.686271241194102,7.79227026401241,0,0.301586917234893,0.0925884451585296,0.977424915930974,1.03993478527958,1.44331342025273,0.231860809950154,0.234817388471643,1.73239737313289,4.1668696131895,1.71228737011138,0,0,18.7124924626422,12.4022260523796,61.3846700252448,1.87467667973554,2.68771405118175,2.55195175036296,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0,3.4378958300245,4.68869788840188,1.71072446022705,2.67351481028641,1.20137223137567,2.28661146104463,0.448524337381443,0.87192013766656,0.22001485746285,1.29271715757778,0,2.535908257668,0.797814349754612,5.2003718455683,0.257207374262142,0,1.0656887160644,1.14382394926518,1.62786481617433,0,0.65147236858747,1.42156779497018,1.58390374586686,1.50719688529793,3.48613383440118,3.19913571782583,27.9734695474738,66.2979360690407,124.392024294989,0.958499421966331,0,0,2.17171960001369,6.98619496671304,0.716243852959582,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,1.2269149171914,4.00136416847742,1.89885516589815,2.49565033836969,4.28229573113188,2.05013139544115,1.99140405487612,0.902838299183157,6.82222512167955,2.0694614258501,0.664225598535437,1.29058417979192,2.34585759063824,1.17480694477644,2.74514739048685,0.413536052245775,1.50999940573032,0.640365346820666,0.303127571446259,1.66435439510497,2.11673205330776,0.496215615637554,0.460385919864187,5.89386198309454,1.79394808957981,0.511707249066704,1.28683136914886,2.96836132889982,4.62629081407967,3.01854933032316,0.739144404124282,5.71179872101983,4.2997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| |||
|short_description=p2@CTSB | |||
}} |
Revision as of 20:43, 22 January 2014
Short description: | p2@CTSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -373bp_to_ENST00000420692, ENST00000540571, uc003wul.2_5end |
EntrezGene: | CTSB |
HGNC: | 2527 |
UniProt: | F5H2P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.53e-16 | 59 |
monocyte | 3.53e-16 | 59 |
monoblast | 3.53e-16 | 59 |
promonocyte | 3.53e-16 | 59 |
defensive cell | 1.28e-15 | 48 |
phagocyte | 1.28e-15 | 48 |
macrophage dendritic cell progenitor | 5.36e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.04e-12 | 66 |
granulocyte monocyte progenitor cell | 5.87e-12 | 67 |
classical monocyte | 1.62e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-11 | 42 |
myeloid leukocyte | 6.70e-10 | 72 |
multi fate stem cell | 4.54e-09 | 427 |
somatic stem cell | 1.17e-08 | 433 |
fibroblast | 9.22e-08 | 76 |
stem cell | 1.38e-07 | 441 |
mesodermal cell | 2.02e-07 | 121 |
connective tissue cell | 4.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.81e-17 | 315 |
mesoderm-derived structure | 2.81e-17 | 315 |
presumptive mesoderm | 2.81e-17 | 315 |
musculoskeletal system | 1.36e-13 | 167 |
lateral plate mesoderm | 1.55e-12 | 203 |
bone marrow | 2.11e-11 | 76 |
skeletal system | 2.47e-11 | 100 |
skeletal element | 7.13e-11 | 90 |
bone element | 8.42e-10 | 82 |
immune system | 1.10e-09 | 93 |
surface structure | 1.63e-08 | 99 |
hemolymphoid system | 1.30e-07 | 108 |
integument | 2.38e-07 | 46 |
integumental system | 2.38e-07 | 46 |
hematopoietic system | 7.77e-07 | 98 |
blood island | 7.77e-07 | 98 |
connective tissue | 8.47e-07 | 371 |