FFCP PHASE1:Hg19::chr7:142960556..142960600,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=373156 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16906 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473649,ENST00000489654,ENST00000494735_5end | |||
|coexpression_cluster_id=C936 | |||
|description=CAGE_peak_1_at_GSTK1_5end | |||
|id=chr7:142960556..142960600,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.93e-35!119;CL:0000738!5.51e-35!140;CL:0000037!4.23e-33!172;CL:0000566!4.23e-33!172;CL:0000988!8.51e-33!182;CL:0002031!4.73e-32!124;CL:0002032!3.98e-31!165;CL:0000837!3.98e-31!165;CL:0002320!5.33e-24!365;CL:0002009!8.12e-23!65;CL:0002194!9.07e-23!63;CL:0000576!9.07e-23!63;CL:0000040!9.07e-23!63;CL:0000559!9.07e-23!63;CL:0002057!2.16e-22!42;CL:0000557!2.50e-22!71;CL:0000134!2.90e-22!358;CL:0000766!5.68e-22!76;CL:0000860!7.99e-21!45;CL:0000839!1.33e-20!70;CL:0000763!3.99e-19!112;CL:0000049!3.99e-19!112;CL:0000048!1.33e-18!430;CL:0000723!1.72e-17!436;CL:0000034!2.08e-16!444;CL:0000219!2.34e-14!390;CL:0002371!1.45e-13!591;CL:0000791!5.62e-12!18;CL:0000789!5.62e-12!18;CL:0002420!5.62e-12!18;CL:0002419!5.62e-12!18;CL:0000790!5.62e-12!18;CL:0000838!3.11e-11!52;CL:0000542!3.20e-11!53;CL:0000051!3.20e-11!53;CL:0000084!6.41e-11!25;CL:0000827!6.41e-11!25;CL:0000144!1.69e-08!625;CL:0000003!2.94e-08!722;CL:0000063!7.03e-08!578;CL:0000625!9.87e-08!11;CL:0002393!8.65e-07!9;CL:0002397!8.65e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-15;33!CL:0002057;1.52e-15;33!CL:0000576;3.30e-15;48!CL:0000473;1.16e-14;39!CL:0000234;1.16e-14;39!CL:0000791;5.64e-12;18!CL:0000789;5.64e-12;18!CL:0002419;5.64e-12;18!CL:0000084;6.62e-11;25!CL:0002087;1.49e-10;104!CL:0000766;1.64e-10;69!CL:0000738;3.19e-08;136!CL:0000625;9.98e-08;11!CL:0000542;2.40e-07;53!CL:0000763;8.51e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.86e-37,115;CL:0000738,1.61e-36,136;CL:0000037,2.50e-34,168;CL:0000988,7.63e-34,177;CL:0002031,1.22e-33,120;CL:0002032,2.43e-32,161;CL:0000837,2.43e-32,161;CL:0002194,6.23e-25,59;CL:0000576,6.23e-25,59;CL:0000040,6.23e-25,59;CL:0000559,6.23e-25,59;CL:0002009,6.33e-25,61;CL:0000557,3.04e-24,67;CL:0000473,4.28e-24,48;CL:0000234,4.28e-24,48;CL:0002320,4.91e-24,361;CL:0000766,9.43e-24,72;CL:0000839,2.06e-22,66;CL:0000860,2.16e-22,42;CL:0002057,2.16e-22,42;CL:0000134,2.65e-22,354;CL:0000763,2.86e-20,108;CL:0000049,2.86e-20,108;CL:0000048,1.31e-18,427;CL:0000723,1.71e-17,433;CL:0000034,2.08e-16,441;CL:0000219,2.35e-14,386;CL:0000791,5.62e-12,18;CL:0000789,5.62e-12,18;CL:0002420,5.62e-12,18;CL:0002419,5.62e-12,18;CL:0000790,5.62e-12,18;CL:0000838,3.11e-11,52;CL:0000542,3.20e-11,53;CL:0000051,3.20e-11,53;CL:0000084,6.41e-11,25;CL:0000827,6.41e-11,25;CL:0000625,9.87e-08,11;CL:0002393,8.65e-07,9;CL:0002397,8.65e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-16;42!CL:0000790;5.64e-12;18!CL:0000051;2.40e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.81e-29!112;UBERON:0002390!9.21e-28!102;UBERON:0003061!9.21e-28!102;UBERON:0002371!7.96e-24!80;UBERON:0002405!2.61e-22!115;UBERON:0002384!4.02e-22!375;UBERON:0001474!1.27e-19!86;UBERON:0003081!1.50e-19!216;UBERON:0004765!5.11e-18!101;UBERON:0001434!5.11e-18!101;UBERON:0002204!4.61e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.20e-30,108;UBERON:0002390,1.95e-29,98;UBERON:0003061,1.95e-29,98;UBERON:0002405,1.12e-26,93;UBERON:0002371,1.20e-25,76;UBERON:0004765,1.67e-22,90;UBERON:0002384,3.82e-22,371;UBERON:0001474,4.44e-21,82;UBERON:0001434,7.89e-20,100;UBERON:0003081,1.08e-19,203;UBERON:0002204,3.15e-14,167;UBERON:0000926,3.15e-11,315;UBERON:0004120,3.15e-11,315;UBERON:0006603,3.15e-11,315 | |||
|phase1_expression=88.8407274633022,108.548965612728,84.1497792452948,90.0659685178174,106.376740473694,75.8934515967321,174.776915936134,68.8574662035246,163.763388881299,52.5870624113229,81.642736652774,93.2744658995836,90.9996074888165,104.087502839399,115.326286753315,61.1815883271115,56.0505911062299,74.4916292195121,53.1846750681653,63.4073449095458,69.1562343318018,56.7353045875339,40.359274185479,26.4167640390666,36.7839934012772,54.7884119212811,50.1634601539169,48.4858412892264,239.558844600983,206.884045574398,188.720854322297,68.0371706114406,66.8677139687715,66.5557218300218,111.320367233893,57.7207083898931,174.105060525564,167.860608785159,191.921036228926,186.412337944917,170.399675896582,142.513213048351,148.105951389657,171.279125282327,130.367200572639,134.876738020426,169.440767904244,120.472191190395,152.994947222181,257.772383520647,211.076422179979,290.636660533071,200.641986188712,154.916324060118,184.180021768305,179.018464905017,134.26982582846,165.845931520472,216.401311906228,153.725003969449,169.424338336746,277.404943457028,226.590715058174,245.931681057365,217.947138210067,110.640118814772,144.494761766973,223.108814747988,200.249440673357,233.04363036859,213.706024429579,165.724936194404,193.35851872638,390.188513818156,339.74167134414,357.048673300764,268.128442546684,286.988042220119,194.31723431677,375.361783507224,339.351851301648,352.176488458214,116.157521344473,125.61188059029,128.089332556352,108.389476531893,96.895828862715,129.319298989759,149.396141249379,112.578343035173,108.150464130795,123.907046957268,102.066951909436,142.745034865348,133.961546552587,131.165274217988,239.002370688307,337.596245201532,343.971307826179,358.280659622223,264.322958239842,291.170400526861,342.895041997924,546.468291021776,477.850781924186,532.567482579025,532.400396162021,354.684864320395,364.686410557899,380.838187062114,493.008431729953,381.091057741594,283.820481892184,257.374276622304,327.196189509577,549.550312083196,445.685434059034,508.568619314292,484.785729909367,299.451489464651,300.149472227809,302.243750134583,267.571986601202,262.628526088867,319.822659974005,297.392228567285,264.403215008577,177.413934037765,195.766223313527,167.996308504047,112.151158504422,101.946530674953,52.4236503558474,76.2636611531435,101.27025794845,99.6544050450467,49.3077287171682,57.9095495660137,41.5953195521899,52.5498671986277,44.3565667750287,65.620516824354,115.117311100443,74.8984574424547,245.033282209286,238.905999574595,233.474178671127,94.4422872249154,133.27481421177,96.5789503456869,49.0943146195762,83.4427557252941,60.4024472797214,55.4001783085529,87.6753821678703,74.2818713238182,61.2355251952855,72.6151093265814,67.2398236477882,62.5927545869933,75.3290822994105,68.4244895146661,78.5879825305106,53.311146650151,70.4823494657131,69.4751886050141,68.9305173962341,52.2517269442615,78.1914851076005,55.0574082549515,66.6854347906683,55.3477753231466,127.967487168947,92.4519390542173,48.7032512661412,51.0320962008256,70.176865831006,78.8800707059238,50.0082418899683,71.206055218073,53.3744978648525,66.6002380726332,51.3498208409614,46.7446032081818,58.1924375083913,67.0513404467046,63.9555276172799,55.299857912776,74.9184184392769,70.1680340499673,87.4274781228036,33.7037011107605,38.8495066483516,39.6071274900341,61.4504055477229,44.46602286686,62.7187491736896,84.3482028670258,79.8672181569739,81.0043612124844,150.191191639594,40.737339576884,32.0303410872228,40.4513608606907,81.210859862955,90.1074119649118,60.3956996804519,52.2922364367697,46.2825260077264,59.3689540915617,64.4272979525068,56.4171260638676,55.648365788757,58.2267620503122,72.58557396932,54.8523079784115,45.0158963844738,42.9137416214995,68.0248750966592,90.5217918185347,57.1565443951749,37.9835410318204,49.1725717700414,73.6323850552161,55.0947163593486,54.7796777192997,8.90408054746046,11.9276791489337,14.0594670872117,15.5491582523056,17.4101387104184,15.6940264402607,104.821186660977,84.264562903268,121.558730790183,183.425331572632,197.794977977466,59.863240820161,49.9010682631181,53.9864706939,58.4558055481688,60.1347265695041,55.0467836337744,62.9662209107968,66.1266337472416,61.1747979544761,129.915360013938,85.547482020102,104.951372889507,123.487317563855,380.265104465493,191.651307252137,166.602753684156,30.9024169590255,81.0493809999118,49.9262327968709,63.4356649661856,105.657648062162,35.8888431509522,39.3500891923751,28.9969391726189,101.913608957399,46.1860294480874,32.6923742029717,39.3319125690003,99.4684825073799,102.782783792008,97.9808884008181,79.8106441938868,87.565588533677,125.81689011066,129.638362887138,109.689797769081,118.104630823339,74.0801185356971,75.9914521219192,39.7639840800646,48.8265016703456,85.4943374538421,57.1489355959294,88.9289183533583,81.2726212919826,92.9573699539401,77.1341268235181,48.2583996620485,63.4100786426741,112.528749321645,66.718253948855,37.1207248658998,84.6967423119847,80.8888804344536,38.236699761768,48.8275277093274,29.33531432838,39.4278733061222,2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| |||
|short_description=p1@GSTK1 | |||
}} |
Revision as of 19:51, 22 January 2014
Short description: | p1@GSTK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSTK1_5end |
Coexpression cluster: | C936_CD4_CD14_granulocyte_CD14CD16_CD8_Dendritic_Hair |
Association with transcript: | 0bp_to_ENST00000473649, ENST00000489654, ENST00000494735_5end |
EntrezGene: | GSTK1 |
HGNC: | 16906 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.20e-30 | 108 |
hematopoietic system | 1.95e-29 | 98 |
blood island | 1.95e-29 | 98 |
immune system | 1.12e-26 | 93 |
bone marrow | 1.20e-25 | 76 |
skeletal element | 1.67e-22 | 90 |
connective tissue | 3.82e-22 | 371 |
bone element | 4.44e-21 | 82 |
skeletal system | 7.89e-20 | 100 |
lateral plate mesoderm | 1.08e-19 | 203 |
musculoskeletal system | 3.15e-14 | 167 |
mesoderm | 3.15e-11 | 315 |
mesoderm-derived structure | 3.15e-11 | 315 |
presumptive mesoderm | 3.15e-11 | 315 |