FFCP PHASE1:Hg19::chr7:134551647..134551658,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |||
|TSSclassifier=strong | |||
|UniProt=C9JE79 | |||
|association_with_transcript=55bp_to_ENST00000435928_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_41_at_CALD1_5end | |||
|id=chr7:134551647..134551658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.60e-09;1!UBERON:0003099;4.03e-09;1!UBERON:0003852;4.03e-09;1!UBERON:0008801;7.85e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.82e-09;1!DOID:4549;2.82e-09;1!DOID:5861;2.82e-09;1!DOID:6496;2.82e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.05e-09,1;DOID:4549,3.05e-09,1;DOID:5861,3.05e-09,1;DOID:6496,3.05e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-29!115;UBERON:0001049!1.57e-14!57;UBERON:0005068!1.57e-14!57;UBERON:0006241!1.57e-14!57;UBERON:0007135!1.57e-14!57;UBERON:0002346!1.68e-14!90;UBERON:0000153!4.69e-14!129;UBERON:0007811!4.69e-14!129;UBERON:0002616!6.96e-14!59;UBERON:0002020!1.33e-13!34;UBERON:0003528!1.33e-13!34;UBERON:0000033!4.27e-13!123;UBERON:0000481!8.55e-13!347;UBERON:0001950!1.63e-12!20;UBERON:0002791!1.66e-12!33;UBERON:0002619!1.72e-12!22;UBERON:0002780!3.34e-12!41;UBERON:0001890!3.34e-12!41;UBERON:0006240!3.34e-12!41;UBERON:0001017!4.00e-12!82;UBERON:0001893!5.66e-12!34;UBERON:0005743!6.12e-12!86;UBERON:0003075!6.83e-12!86;UBERON:0007284!6.83e-12!86;UBERON:0000956!7.76e-12!25;UBERON:0000203!7.76e-12!25;UBERON:0003080!9.31e-12!42;UBERON:0000955!2.32e-11!69;UBERON:0006238!2.32e-11!69;UBERON:0001869!1.28e-10!32;UBERON:0003056!3.05e-10!61;UBERON:0000477!7.17e-10!286;UBERON:0000073!7.33e-10!94;UBERON:0001016!7.33e-10!94;UBERON:0000924!5.05e-09!173;UBERON:0006601!5.05e-09!173;UBERON:0000922!1.79e-08!612;UBERON:0000475!2.00e-08!365;UBERON:0001007!4.20e-08!155;UBERON:0001555!4.20e-08!155;UBERON:0007026!4.20e-08!155;UBERON:0004111!7.61e-08!241;UBERON:0004121!2.26e-07!169;UBERON:0004921!2.99e-07!129;UBERON:0004185!2.99e-07!129;UBERON:0000062!3.29e-07!511;UBERON:0000468!4.72e-07!659;UBERON:0004119!4.86e-07!169;UBERON:0000925!4.86e-07!169;UBERON:0006595!4.86e-07!169;UBERON:0001872!5.88e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004089;3.11e-16;2!UBERON:0005409;1.59e-11;22!UBERON:0000160;2.12e-10;17!UBERON:0000922;2.26e-09;49!UBERON:0004921;2.69e-09;33!UBERON:0002171;4.03e-09;1!UBERON:0005705;4.03e-09;1!UBERON:0008193;4.03e-09;1!UBERON:0010912;4.03e-09;1!UBERON:0006518;4.03e-09;1!UBERON:0008949;4.03e-09;1!UBERON:0002514;4.03e-09;1!UBERON:0003457;4.03e-09;1!UBERON:0008907;4.03e-09;1!UBERON:0008001;4.03e-09;1!UBERON:0007213;4.03e-09;1!UBERON:0009891;4.03e-09;1!UBERON:0007914;4.03e-09;1!UBERON:0007375;4.03e-09;1!UBERON:0003323;4.03e-09;1!UBERON:0010258;4.03e-09;1!UBERON:0000101;4.03e-09;1!UBERON:0005253;4.03e-09;1!UBERON:0007842;4.03e-09;1!UBERON:0002167;4.03e-09;1!UBERON:0002397;4.03e-09;1!UBERON:0003113;4.03e-09;1!UBERON:0003277;4.03e-09;1!UBERON:0001709;4.03e-09;1!UBERON:0002244;4.03e-09;1!UBERON:0005620;4.03e-09;1!UBERON:0010364;4.03e-09;1!UBERON:0004288;4.03e-09;1!UBERON:0001831;7.85e-09;1!UBERON:0001567;7.85e-09;1!UBERON:0002108;4.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004089,3.77e-16,2;UBERON:0000160,1.70e-10,17;UBERON:0005409,3.18e-10,25;UBERON:0005705,3.58e-09,1;UBERON:0008193,3.58e-09,1;UBERON:0010912,3.58e-09,1;UBERON:0002514,3.58e-09,1;UBERON:0003457,3.58e-09,1;UBERON:0008907,3.58e-09,1;UBERON:0008001,3.58e-09,1;UBERON:0007213,3.58e-09,1;UBERON:0009891,3.58e-09,1;UBERON:0007914,3.58e-09,1;UBERON:0009292,3.58e-09,1;UBERON:0003099,3.58e-09,1;UBERON:0007375,3.58e-09,1;UBERON:0003323,3.58e-09,1;UBERON:0010258,3.58e-09,1;UBERON:0007842,3.58e-09,1;UBERON:0009494,3.58e-09,1;UBERON:0010042,3.58e-09,1;UBERON:0010045,3.58e-09,1;UBERON:0010259,3.58e-09,1;UBERON:0010359,3.58e-09,1;UBERON:0009526,3.58e-09,1;UBERON:0002397,3.58e-09,1;UBERON:0003113,3.58e-09,1;UBERON:0003277,3.58e-09,1;UBERON:0001709,3.58e-09,1;UBERON:0004066,3.58e-09,1;UBERON:0002244,3.58e-09,1;UBERON:0005620,3.58e-09,1;UBERON:0004362,3.58e-09,1;UBERON:0010364,3.58e-09,1;UBERON:0010046,3.58e-09,1;UBERON:0005868,3.58e-09,1;UBERON:0007238,3.58e-09,1;UBERON:0004288,3.58e-09,1;UBERON:0004068,3.58e-09,1;UBERON:0010334,3.58e-09,1;UBERON:0003852,3.58e-09,1;UBERON:0010253,3.58e-09,1;UBERON:0002171,4.19e-09,1;UBERON:0006518,4.19e-09,1;UBERON:0008949,4.19e-09,1;UBERON:0000101,4.19e-09,1;UBERON:0002167,4.19e-09,1;UBERON:0001831,1.07e-08,1;UBERON:0001567,1.07e-08,1;UBERON:0008801,1.07e-08,1;UBERON:0004921,1.41e-08,118;UBERON:0004119,5.05e-08,160;UBERON:0000925,5.05e-08,160;UBERON:0006595,5.05e-08,160;UBERON:0001007,9.02e-08,145;UBERON:0001555,9.02e-08,145;UBERON:0007026,9.02e-08,145;UBERON:0011216,1.37e-07,223;UBERON:0002108,3.92e-07,4;UBERON:0000059,9.56e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,1.15235184896,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,1.16193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0.728364672026868,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0.539617372749944,0.54907405947211,0.589062011728432,0,0,0,0.48763373908959,0,0,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,9.69681148000825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.23840590304675,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.969890164884194,3.00070830751101,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.236417121897595,2.62272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,5.23258321581704,3.30129040709298,2.48543433208317,0,0,0,0,0,0,0,0,0,1.77213635993397,0.244052529803926,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,2.97604888142356,0.123935764259002,0,0,0,0,2.82140754952547,0,0.192687675289379,0,0.478901577171454,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,3.38157577597667,0.601682626794058,0,0,0,0,0,0,0.781078098613847,1.03343398250592,0.19024743058172,0.546974809018219,1.09651553371436,0.496211178389294,0.351742488719241,0,0,0.336283722218824,0,0,27.0542228996048,0,0,0.0679697329768317,0.0657727735628491,0,0,2.43328587836593,0.314231179832004,0,1.82631744101899,0,0,0.285906176706625,0,0,0.521574816907738,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2644426535001,0.771741581079447,4.5897507705831,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.0939839179798536,0.902410431630081,0,0,0,0,7.30336388246517,0,0.143339583151451,0,0,0,1.5870805215462,0.371995018166751,0,0,0,0,0.760191006068622,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0.952257725854961,0.0645889098360061,0.124149428591716,0,0,0.606351566874658,0.435433495793923,0.342233301085281,0.202056159043763,0.143444410785353,1.33064142618405,0,0,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p41@CALD1 | |||
}} |
Revision as of 19:27, 22 January 2014
Short description: | p41@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_CALD1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 55bp_to_ENST00000435928_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9JE79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.05e-09 | 1 |
extraosseous chondrosarcoma | 3.05e-09 | 1 |
myxoid chondrosarcoma | 3.05e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 3.05e-09 | 1 |