FFCP PHASE1:Hg19::chr7:97736199..97736211,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17880 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWU2 | |||
|association_with_transcript=2bp_to_ENST00000297293,NM_014916,uc003upd.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_LMTK2_5end | |||
|id=chr7:97736199..97736211,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.62e-15!45;CL:0002057!1.69e-14!42;CL:0000766!2.36e-12!76;CL:0000738!4.93e-12!140;CL:0002009!2.01e-09!65;CL:0000839!4.82e-09!70;CL:0002031!4.92e-09!124;CL:0000557!5.97e-09!71;CL:0002194!1.34e-08!63;CL:0000576!1.34e-08!63;CL:0000040!1.34e-08!63;CL:0000559!1.34e-08!63;CL:0002087!1.85e-08!119;CL:0000037!5.64e-08!172;CL:0000566!5.64e-08!172;CL:0002032!3.40e-07!165;CL:0000837!3.40e-07!165;CL:0000763!4.56e-07!112;CL:0000049!4.56e-07!112;CL:0000094!5.20e-07!8;CL:0000988!6.62e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.40e-15;33!CL:0002057;6.40e-15;33!CL:0000094;8.66e-14;8!CL:0000473;1.57e-10;39!CL:0000234;1.57e-10;39!CL:0000081;1.22e-09;11!CL:0000576;2.42e-09;48!CL:0000766;1.43e-08;69!CL:0000775;3.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.07e-16,42;CL:0002057,1.07e-16,42;CL:0000738,1.14e-16,136;CL:0000766,1.68e-15,72;CL:0000094,7.26e-14,8;CL:0000473,7.37e-14,48;CL:0000234,7.37e-14,48;CL:0000037,6.38e-13,168;CL:0002009,1.12e-11,61;CL:0000988,1.14e-11,177;CL:0002032,1.25e-11,161;CL:0000837,1.25e-11,161;CL:0000763,3.48e-11,108;CL:0000049,3.48e-11,108;CL:0002087,1.58e-10,115;CL:0000557,4.19e-10,67;CL:0002194,6.08e-10,59;CL:0000576,6.08e-10,59;CL:0000040,6.08e-10,59;CL:0000559,6.08e-10,59;CL:0002031,8.11e-10,120;CL:0000081,1.08e-09,11;CL:0000839,2.44e-08,66;CL:0000775,3.99e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-13!115;UBERON:0002619!4.59e-10!22;UBERON:0002020!2.50e-09!34;UBERON:0003528!2.50e-09!34;UBERON:0001950!2.86e-09!20;UBERON:0002390!3.27e-09!102;UBERON:0003061!3.27e-09!102;UBERON:0001869!4.22e-09!32;UBERON:0001017!4.76e-09!82;UBERON:0001893!7.12e-09!34;UBERON:0000956!1.08e-08!25;UBERON:0000203!1.08e-08!25;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0002791!2.49e-08!33;UBERON:0001049!3.30e-08!57;UBERON:0005068!3.30e-08!57;UBERON:0006241!3.30e-08!57;UBERON:0007135!3.30e-08!57;UBERON:0002193!5.74e-08!112;UBERON:0002780!6.24e-08!41;UBERON:0001890!6.24e-08!41;UBERON:0006240!6.24e-08!41;UBERON:0005743!6.62e-08!86;UBERON:0002616!1.42e-07!59;UBERON:0002371!1.54e-07!80;UBERON:0000073!1.80e-07!94;UBERON:0001016!1.80e-07!94;UBERON:0003080!1.95e-07!42;UBERON:0001474!2.39e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.63e-21;22!UBERON:0001950;9.12e-21;20!UBERON:0001869;1.12e-18;32!UBERON:0000956;4.42e-18;25!UBERON:0000203;4.42e-18;25!UBERON:0001893;1.21e-17;34!UBERON:0002791;7.04e-17;32!UBERON:0003528;8.90e-17;34!UBERON:0002020;8.90e-17;34!UBERON:0000200;1.71e-11;6!UBERON:0002780;9.43e-11;41!UBERON:0001890;9.43e-11;41!UBERON:0000073;1.72e-07;53!UBERON:0002616;1.72e-07;53!UBERON:0002021;8.01e-07;5!UBERON:0001872;9.81e-07;5!UBERON:0001017;9.90e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.82e-22,22;UBERON:0001869,6.86e-22,32;UBERON:0001950,1.06e-21,20;UBERON:0001893,2.75e-20,34;UBERON:0003528,3.72e-20,34;UBERON:0002020,3.72e-20,34;UBERON:0002791,1.56e-19,32;UBERON:0000956,6.20e-19,25;UBERON:0000203,6.20e-19,25;UBERON:0002780,6.67e-16,41;UBERON:0001890,6.67e-16,41;UBERON:0003080,6.67e-16,41;UBERON:0006240,6.67e-16,41;UBERON:0001049,6.66e-14,56;UBERON:0005068,6.66e-14,56;UBERON:0006241,6.66e-14,56;UBERON:0007135,6.66e-14,56;UBERON:0000073,1.34e-13,53;UBERON:0002616,1.34e-13,53;UBERON:0000200,2.78e-12,6;UBERON:0001017,2.23e-11,81;UBERON:0000955,2.55e-11,68;UBERON:0006238,2.55e-11,68;UBERON:0007023,7.30e-11,114;UBERON:0001016,1.84e-10,89;UBERON:0003056,5.20e-10,61;UBERON:0002390,1.55e-09,98;UBERON:0003061,1.55e-09,98;UBERON:0002371,4.41e-09,76;UBERON:0003075,1.91e-08,82;UBERON:0007284,1.91e-08,82;UBERON:0002193,5.33e-08,108;UBERON:0001474,5.44e-08,82;UBERON:0002346,8.87e-08,86;UBERON:0002405,3.88e-07,93;UBERON:0002021,5.04e-07,5;UBERON:0001870,6.08e-07,3;UBERON:0001872,7.85e-07,5;UBERON:0004765,8.84e-07,90 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,5.11373559903575,1.53531759238885,0.928896739896456,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,5.53995408531877,2.60707781711184,2.60413044859022,0.223915474239924,0.32389366601898,0,0.581592955118259,0.377875943688809,0.970336244751265,0.232429036905685,1.23350366406548,1.23882548358041,11.2200033005639,9.22178543504762,9.22280696565482,1.72372840368309,0.645484683583826,1.35426486594342,1.50593871634084,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,1.27867425159808,15.8328624089624,15.9570926097305,12.3605177654481,0.580418477257168,0.56738522469114,0.622822248995575,13.0649305933506,11.9941071236646,8.47036494349955,1.21079900526674,1.10483290796269,0.316462387440884,0.422510572623884,0,0,0.22465726229299,0.600707571366025,1.12507910687956,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0.263384084775077,3.73748563216283,3.53709686474248,1.85041349099558,0,0.977766799900771,0,0,0.111410456885174,0.589211814949674,0,0.541607727530031,0.128091319725675,0.130059347559878,0.164437904603676,0.829050053357545,0,1.03800594213442,0.802622484269139,1.04535523804977,0.226618685395132,2.29932296161153,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,3.42731463482045,2.94184215361858,3.91025890483557,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.43917392846563,0.982343066232845,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,1.04142150482278,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,1.10298924103761,0,0,0,0.337834441449967,0,0,0.183201743930407,54.0299711487859,27.1446184903828,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0.309157587715317,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.57978255948989,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,1.32438929824395,0.491953754172454,0.171567810298526,0.219500570817251,0,0.502644862058154,0,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0.383382679165211,0,0.088048434013226,0.621984346622316,0.720599767084807,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.224170287987055,1.18218456121156,3.01878604803324,1.28343036279748,0.254094624222463,0,0,0.335032530668698,0,29.9602809578873,20.9413021442817,33.5676565883189,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.82707210449155,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,1.03850885836724,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0,0.438519753291869,0.784306353074702,0,0,0,0.309123034943167,0.27470839445503,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.255225424989168,0.30347334256665,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0,2.53723804616085,0.764637207142375,0,0.476463550915578,0.411362273086194,0.648473311192717,1.62009431171434,0.79312517629427,0,0.962479855263359,0,0,0.144269212976445,0.284567373393656,0.318852545457645,0,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,1.27753871307098,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,2.81974010175699,0.935702702041099,0.146508179271894,0.242721043499027,0.334330152832435,0,0.47748896947538,0,0.307160702099232,0,1.40669416410513,0,0.659215496907038,0.63337622438398,0.398495976502139,1.10513566212459,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,2.68531762013414,0,0,0,1.11136990144637,2.90799823828566,0.74214478529481,1.99613798001194,0.7812832832557,0.0874599999961957,0,0,0,0.472775363535873,0,0.291604613383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| |||
|short_description=p3@LMTK2 | |||
}} |
Revision as of 18:06, 22 January 2014
Short description: | p3@LMTK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LMTK2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 2bp_to_ENST00000297293, NM_014916, uc003upd.1_5end |
EntrezGene: | LMTK2 |
HGNC: | 17880 |
UniProt: | Q8IWU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.07e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-16 | 42 |
leukocyte | 1.14e-16 | 136 |
myeloid leukocyte | 1.68e-15 | 72 |
granulocyte | 7.26e-14 | 8 |
defensive cell | 7.37e-14 | 48 |
phagocyte | 7.37e-14 | 48 |
hematopoietic stem cell | 6.38e-13 | 168 |
macrophage dendritic cell progenitor | 1.12e-11 | 61 |
hematopoietic cell | 1.14e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.25e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-11 | 161 |
myeloid cell | 3.48e-11 | 108 |
common myeloid progenitor | 3.48e-11 | 108 |
nongranular leukocyte | 1.58e-10 | 115 |
granulocyte monocyte progenitor cell | 4.19e-10 | 67 |
monopoietic cell | 6.08e-10 | 59 |
monocyte | 6.08e-10 | 59 |
monoblast | 6.08e-10 | 59 |
promonocyte | 6.08e-10 | 59 |
hematopoietic lineage restricted progenitor cell | 8.11e-10 | 120 |
blood cell | 1.08e-09 | 11 |
myeloid lineage restricted progenitor cell | 2.44e-08 | 66 |
neutrophil | 3.99e-08 | 3 |