FFCP PHASE1:Hg19::chr7:93519576..93519598,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93519576..93519598,+ | |||
|id=chr7:93519576..93519598,+ | |||
|ontology_enrichment_celltype=CL:0000187!1.63e-23!54;CL:0000359!2.35e-23!32;CL:0000680!5.21e-23!57;CL:0000056!5.21e-23!57;CL:0000355!5.21e-23!57;CL:0000192!1.39e-22!42;CL:0000514!1.39e-22!42;CL:0000183!5.98e-22!59;CL:0000393!5.14e-20!60;CL:0000211!5.14e-20!60;CL:0000222!4.39e-15!119;CL:0000055!1.46e-11!180;CL:0002595!4.66e-09!5;CL:0002494!8.39e-09!16;CL:0002594!9.48e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-27;32!CL:0002595;2.53e-26;5!CL:0000192;1.88e-17;43!CL:0002593;8.60e-12;2!CL:0000187;2.77e-10;55!CL:0000393;5.47e-08;61!CL:0000211;5.47e-08;61!CL:0002494;7.85e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.83e-28,32;CL:0002595,3.65e-26,5;CL:0000192,1.59e-23,43;CL:0000514,1.59e-23,43;CL:0000187,1.14e-17,55;CL:0000680,1.39e-16,58;CL:0000056,1.39e-16,58;CL:0000355,1.39e-16,58;CL:0000393,1.32e-15,61;CL:0000211,1.32e-15,61;CL:0002593,9.57e-12,2;CL:0002494,7.46e-08,16;CL:0000222,2.58e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.88e-17;43!CL:0000355;9.25e-09;58!UBERON:0003124;8.34e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!6.51e-11!14;DOID:0060072!9.21e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.07e-07;3!DOID:127;1.07e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.55e-08,3;DOID:127,9.55e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.60e-25!84;UBERON:0001637!1.90e-23!42;UBERON:0003509!1.90e-23!42;UBERON:0004572!1.90e-23!42;UBERON:0001134!5.98e-22!61;UBERON:0002036!5.98e-22!61;UBERON:0003082!5.98e-22!61;UBERON:0004290!7.08e-22!70;UBERON:0001981!3.89e-21!60;UBERON:0007500!3.89e-21!60;UBERON:0004537!3.89e-21!60;UBERON:0006965!3.89e-21!60;UBERON:0002385!7.13e-21!63;UBERON:0001015!7.13e-21!63;UBERON:0000383!7.13e-21!63;UBERON:0000055!2.12e-20!69;UBERON:0000486!2.78e-20!82;UBERON:0002049!7.97e-20!79;UBERON:0007798!7.97e-20!79;UBERON:0000914!8.20e-20!83;UBERON:0002329!8.20e-20!83;UBERON:0003077!8.20e-20!83;UBERON:0003059!8.20e-20!83;UBERON:0007282!8.20e-20!83;UBERON:0009618!8.20e-20!83;UBERON:0007285!8.20e-20!83;UBERON:0004535!5.88e-19!110;UBERON:0000490!2.92e-18!138;UBERON:0001009!4.78e-18!113;UBERON:0004573!2.10e-17!33;UBERON:0004571!2.10e-17!33;UBERON:0003914!5.74e-16!118;UBERON:0005256!1.22e-13!143;UBERON:0000119!1.24e-09!312;UBERON:0000926!1.29e-09!448;UBERON:0004120!1.29e-09!448;UBERON:0006603!1.29e-09!448;UBERON:0000483!1.64e-09!309;UBERON:0000992!3.65e-09!13;UBERON:0003834!4.66e-09!5;UBERON:0001533!4.66e-09!5;UBERON:0002100!1.26e-08!216;UBERON:0003104!1.01e-07!238;UBERON:0009142!1.01e-07!238;UBERON:0003513!1.58e-07!8;UBERON:0000948!2.13e-07!24;UBERON:0005498!2.13e-07!24;UBERON:0004140!2.13e-07!24;UBERON:0009881!2.13e-07!24;UBERON:0004141!2.13e-07!24;UBERON:0003084!2.13e-07!24;UBERON:0007005!2.13e-07!24;UBERON:0004139!2.13e-07!24;UBERON:0004291!2.13e-07!24;UBERON:0003100!7.44e-07!41;UBERON:0001310!9.48e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.53e-26;5!UBERON:0001533;2.53e-26;5!UBERON:0003513;9.58e-19;7!UBERON:0001637;2.87e-15;42!UBERON:0003509;2.87e-15;42!UBERON:0004572;2.87e-15;42!UBERON:0004573;3.97e-15;33!UBERON:0004571;3.97e-15;33!UBERON:0002119;2.21e-12;4!UBERON:0002456;8.60e-12;2!UBERON:0007500;2.51e-08;56!UBERON:0001981;2.51e-08;56!UBERON:0004537;2.51e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.65e-26,5;UBERON:0001533,3.65e-26,5;UBERON:0001637,5.89e-21,42;UBERON:0003509,5.89e-21,42;UBERON:0004572,5.89e-21,42;UBERON:0004872,3.92e-20,83;UBERON:0003513,1.24e-18,7;UBERON:0004573,5.50e-17,33;UBERON:0004571,5.50e-17,33;UBERON:0002329,6.49e-17,71;UBERON:0003059,6.49e-17,71;UBERON:0007282,6.49e-17,71;UBERON:0004290,6.49e-17,71;UBERON:0009618,6.49e-17,71;UBERON:0003077,1.26e-16,72;UBERON:0007285,1.26e-16,72;UBERON:0007524,2.40e-16,73;UBERON:0001134,2.66e-15,62;UBERON:0002036,2.66e-15,62;UBERON:0003082,2.66e-15,62;UBERON:0007503,4.67e-15,78;UBERON:0002385,1.01e-14,64;UBERON:0001015,1.01e-14,64;UBERON:0000383,1.01e-14,64;UBERON:0007500,4.82e-14,59;UBERON:0001981,4.82e-14,59;UBERON:0004537,4.82e-14,59;UBERON:0006965,4.82e-14,59;UBERON:0000486,6.36e-14,83;UBERON:0002119,1.73e-12,4;UBERON:0000055,8.65e-12,68;UBERON:0002456,9.57e-12,2;UBERON:0003914,1.78e-11,117;UBERON:0004535,3.70e-11,109;UBERON:0001009,9.38e-11,112;UBERON:0005256,9.50e-11,122;UBERON:0003104,2.14e-10,160;UBERON:0009142,2.14e-10,160;UBERON:0002049,6.70e-10,78;UBERON:0007798,6.70e-10,78;UBERON:0000490,3.14e-09,148;UBERON:0000926,6.04e-09,315;UBERON:0004120,6.04e-09,315;UBERON:0006603,6.04e-09,315;UBERON:0003081,3.26e-07,203;UBERON:0000948,3.74e-07,24;UBERON:0005498,3.74e-07,24;UBERON:0004140,3.74e-07,24;UBERON:0009881,3.74e-07,24;UBERON:0004141,3.74e-07,24;UBERON:0003084,3.74e-07,24;UBERON:0007005,3.74e-07,24;UBERON:0004139,3.74e-07,24;UBERON:0004291,3.74e-07,24 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,1.48181739276657,2.28846664358842,0,0,0,0.936480230490962,1.1409436430889,1.79338416662161,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,1.05166641234618,0.680593098960126,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,1.29271715757778,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0,2.37585561880029,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0,1.03850885836724,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0.784349769176855,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,1.6068392984416,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0.596586391912706,0,0.165284915360978,0,0.127612712494584,0,0,0,0.6970372701606,1.23213432070436,2.12922412126809,3.47973196830029,4.81842969670192,0.715624433709956,0,0.949138274156178,0.953150969619124,0,0,0.636406495851874,3.92474320099615,0,0.823611089208164,0.589062011728432,0.404364963146632,0,14.3227875121254,0,13.6479554193519,3.16950440270266,0,0.424216295861138,2.26016233240486,1.10273068709225,4.64407282668854,6.57676327880644,0,0,1.01455188481352,0.92947049429925,1.40847801266121,0,0,0.7133421029625,1.77380532035299,0.211107635297664,0,0,0,0.288666338176536,0,0,1.69458841398202,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,0,0,0,0,0,0,2.22617410045812,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10142335502381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0,1.62899880526114,0.864221491201268,3.26587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,1.5543720058278,5.47064054961645,3.66382564476516,0,3.57104800815397,2.90294345488599,0.797525143673985,0,0.601030435988874,0.380805212168795,0,0.181848659202559,0.966695013382396,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,7.00748724284847,0,0,0,0,0,0,0,0,0,0,2.80705868584208,0,0.643288897589907,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:93519576..93519598,+ | |||
}} |
Revision as of 17:54, 22 January 2014
Short description: | p@chr7:93519576..93519598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93519576..93519598, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.83e-28 | 32 |
smooth muscle cell of the subclavian artery | 3.65e-26 | 5 |
smooth muscle cell | 1.59e-23 | 43 |
smooth muscle myoblast | 1.59e-23 | 43 |
muscle cell | 1.14e-17 | 55 |
muscle precursor cell | 1.39e-16 | 58 |
myoblast | 1.39e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-16 | 58 |
electrically responsive cell | 1.32e-15 | 61 |
electrically active cell | 1.32e-15 | 61 |
smooth muscle cell of the internal thoracic artery | 9.57e-12 | 2 |
cardiocyte | 7.46e-08 | 16 |
mesodermal cell | 2.58e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.55e-08 | 3 |
leiomyoma | 9.55e-08 | 3 |