FFCP PHASE1:Hg19::chr7:93518492..93518540,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518492..93518540,- | |||
|id=chr7:93518492..93518540,- | |||
|ontology_enrichment_celltype=CL:0000680!2.47e-25!57;CL:0000056!2.47e-25!57;CL:0000355!2.47e-25!57;CL:0000187!1.36e-24!54;CL:0000192!1.85e-24!42;CL:0000514!1.85e-24!42;CL:0000183!2.76e-22!59;CL:0000359!5.16e-22!32;CL:0000393!6.56e-22!60;CL:0000211!6.56e-22!60;CL:0000222!1.22e-21!119;CL:0000055!1.06e-19!180;CL:0000057!7.74e-09!75;CL:0000220!4.92e-08!246;CL:0000548!5.09e-08!679;CL:0000004!5.09e-08!679;CL:0000255!5.09e-08!679;CL:0002494!5.18e-08!16;CL:0002321!8.29e-08!248;CL:0000012!9.02e-08!682;CL:0000144!9.63e-08!625;CL:0000048!1.51e-07!430;CL:0000723!2.14e-07!436;CL:0002595!2.44e-07!5;CL:0002371!8.09e-07!591;CL:0000034!9.72e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-35;32!CL:0000192;3.53e-26;43!CL:0002595;2.71e-14;5!CL:0000187;1.04e-13;55!CL:0000393;7.94e-12;61!CL:0000211;7.94e-12;61!CL:0002594;6.56e-11;4!CL:0002494;2.51e-09;16!CL:0002539;1.70e-08;10!CL:0002593;5.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.45e-37,32;CL:0000192,4.36e-37,43;CL:0000514,4.36e-37,43;CL:0000680,1.23e-29,58;CL:0000056,1.23e-29,58;CL:0000355,1.23e-29,58;CL:0000187,1.64e-29,55;CL:0000393,8.12e-26,61;CL:0000211,8.12e-26,61;CL:0002595,2.52e-14,5;CL:0000222,3.45e-14,121;CL:0002594,5.64e-11,4;CL:0000048,6.16e-11,427;CL:0000723,1.44e-10,433;CL:0000034,4.28e-10,441;CL:0002494,2.83e-09,16;CL:0002539,1.40e-08,10;CL:0000057,8.41e-08,76;CL:0002593,5.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.53e-26;43!CL:0000355;3.89e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!2.87e-15!14;DOID:120!1.05e-08!27;DOID:193!9.76e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.66e-24;14!DOID:120;2.61e-13;27!DOID:193;3.57e-12;29!DOID:0060072;1.35e-11;4!DOID:0060084;2.70e-09;3!DOID:127;2.70e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.25e-24,14;DOID:120,3.10e-13,27;DOID:193,4.18e-12,29;DOID:0060072,1.41e-11,4;DOID:0060084,2.75e-09,3;DOID:127,2.75e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.29e-27!84;UBERON:0002049!1.96e-25!79;UBERON:0007798!1.96e-25!79;UBERON:0001637!4.93e-25!42;UBERON:0003509!4.93e-25!42;UBERON:0004572!4.93e-25!42;UBERON:0001981!2.95e-24!60;UBERON:0007500!2.95e-24!60;UBERON:0004537!2.95e-24!60;UBERON:0006965!2.95e-24!60;UBERON:0000055!8.73e-24!69;UBERON:0001134!1.23e-22!61;UBERON:0002036!1.23e-22!61;UBERON:0003082!1.23e-22!61;UBERON:0004535!1.48e-22!110;UBERON:0004290!1.54e-21!70;UBERON:0002385!2.01e-21!63;UBERON:0001015!2.01e-21!63;UBERON:0000383!2.01e-21!63;UBERON:0001009!2.17e-21!113;UBERON:0000914!1.62e-19!83;UBERON:0002329!1.62e-19!83;UBERON:0003077!1.62e-19!83;UBERON:0003059!1.62e-19!83;UBERON:0007282!1.62e-19!83;UBERON:0009618!1.62e-19!83;UBERON:0007285!1.62e-19!83;UBERON:0000490!2.94e-19!138;UBERON:0003914!3.53e-19!118;UBERON:0004573!9.38e-19!33;UBERON:0004571!9.38e-19!33;UBERON:0000486!1.13e-18!82;UBERON:0005256!6.98e-15!143;UBERON:0000119!9.89e-11!312;UBERON:0000483!2.16e-10!309;UBERON:0000992!1.47e-09!13;UBERON:0000947!4.01e-09!21;UBERON:0010191!4.01e-09!21;UBERON:0002100!4.07e-09!216;UBERON:0000477!1.22e-08!286;UBERON:0000948!4.40e-08!24;UBERON:0005498!4.40e-08!24;UBERON:0004140!4.40e-08!24;UBERON:0009881!4.40e-08!24;UBERON:0004141!4.40e-08!24;UBERON:0003084!4.40e-08!24;UBERON:0007005!4.40e-08!24;UBERON:0004139!4.40e-08!24;UBERON:0004291!4.40e-08!24;UBERON:0003513!5.61e-08!8;UBERON:0004111!7.89e-08!241;UBERON:0003834!2.44e-07!5;UBERON:0001533!2.44e-07!5;UBERON:0001135!3.53e-07!15;UBERON:0003104!4.16e-07!238;UBERON:0009142!4.16e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.42e-20;42!UBERON:0003509;4.42e-20;42!UBERON:0004572;4.42e-20;42!UBERON:0004573;1.46e-18;33!UBERON:0004571;1.46e-18;33!UBERON:0000992;6.07e-15;13!UBERON:0003834;2.71e-14;5!UBERON:0001533;2.71e-14;5!UBERON:0003513;5.89e-14;7!UBERON:0002118;5.88e-13;5!UBERON:0007500;1.11e-11;56!UBERON:0001981;1.11e-11;56!UBERON:0004537;1.11e-11;56!UBERON:0000055;1.14e-11;65!UBERON:0002119;3.39e-11;4!UBERON:0001310;6.56e-11;4!UBERON:0000991;1.20e-10;21!UBERON:0002049;1.47e-09;75!UBERON:0007798;1.47e-09;75!UBERON:0003134;2.32e-09;33!UBERON:0001135;2.59e-09;15!UBERON:0004237;1.70e-08;10!UBERON:0004695;1.70e-08;10!UBERON:0002111;1.70e-08;10!UBERON:0004178;1.70e-08;10!UBERON:0000474;3.74e-08;37!UBERON:0003100;1.31e-07;41!UBERON:0002456;5.39e-07;2!UBERON:0003914;7.19e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.12e-29,42;UBERON:0003509,2.12e-29,42;UBERON:0004572,2.12e-29,42;UBERON:0002329,2.76e-28,71;UBERON:0003059,2.76e-28,71;UBERON:0007282,2.76e-28,71;UBERON:0004290,2.76e-28,71;UBERON:0009618,2.76e-28,71;UBERON:0003077,9.12e-28,72;UBERON:0007285,9.12e-28,72;UBERON:0007524,2.92e-27,73;UBERON:0004872,3.09e-27,83;UBERON:0001134,3.45e-27,62;UBERON:0002036,3.45e-27,62;UBERON:0003082,3.45e-27,62;UBERON:0002385,4.43e-26,64;UBERON:0001015,4.43e-26,64;UBERON:0000383,4.43e-26,64;UBERON:0007503,6.17e-25,78;UBERON:0000486,6.78e-23,83;UBERON:0007500,9.57e-23,59;UBERON:0001981,9.57e-23,59;UBERON:0004537,9.57e-23,59;UBERON:0006965,9.57e-23,59;UBERON:0000055,3.06e-22,68;UBERON:0002049,1.69e-21,78;UBERON:0007798,1.69e-21,78;UBERON:0004573,3.94e-21,33;UBERON:0004571,3.94e-21,33;UBERON:0004535,6.70e-21,109;UBERON:0001009,4.46e-20,112;UBERON:0005256,2.57e-16,122;UBERON:0000490,7.88e-16,148;UBERON:0003914,2.85e-15,117;UBERON:0000992,6.58e-15,13;UBERON:0000926,1.20e-14,315;UBERON:0004120,1.20e-14,315;UBERON:0006603,1.20e-14,315;UBERON:0003834,2.52e-14,5;UBERON:0001533,2.52e-14,5;UBERON:0003513,6.05e-14,7;UBERON:0002118,7.98e-13,5;UBERON:0003104,4.85e-12,160;UBERON:0009142,4.85e-12,160;UBERON:0002119,2.79e-11,4;UBERON:0001310,5.64e-11,4;UBERON:0003134,6.66e-11,37;UBERON:0000474,6.66e-11,37;UBERON:0000991,1.20e-10,21;UBERON:0009196,1.20e-10,21;UBERON:0009117,1.20e-10,21;UBERON:0005564,1.20e-10,21;UBERON:0004176,4.59e-10,22;UBERON:0003100,1.67e-09,41;UBERON:0001135,2.11e-09,15;UBERON:0003133,6.01e-09,48;UBERON:0000948,7.74e-09,24;UBERON:0005498,7.74e-09,24;UBERON:0004140,7.74e-09,24;UBERON:0009881,7.74e-09,24;UBERON:0004141,7.74e-09,24;UBERON:0003084,7.74e-09,24;UBERON:0007005,7.74e-09,24;UBERON:0004139,7.74e-09,24;UBERON:0004291,7.74e-09,24;UBERON:0004237,1.40e-08,10;UBERON:0004695,1.40e-08,10;UBERON:0002111,1.40e-08,10;UBERON:0004178,1.40e-08,10;UBERON:0003498,1.90e-08,5;UBERON:0005985,1.90e-08,5;UBERON:0002100,6.15e-08,199;UBERON:0005156,1.09e-07,59;UBERON:0000990,1.09e-07,59;UBERON:0007100,1.26e-07,27;UBERON:0003081,4.26e-07,203;UBERON:0002456,5.32e-07,2;UBERON:0004111,8.94e-07,240 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,0,0.982935746006035,0,0,0,0.123766352960047,0.994192127183747,1.34465029290355,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0,0,0.144846518960824,0,0.973269740605272,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,0,0.417989933073621,0,0,0.33472061276467,0,3.04108842287405,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,1.06400514659507,0,4.2699598291882,0.74000264525148,0,2.82892411346345,3.10577615915572,0.605429710579726,0.576175924479999,0,1.24864030732128,1.71141546463335,2.24173020827702,0,0,0,0.204154171254893,0,0.309977343527296,1.18800285728205,1.48360157567134,2.73048408581408,2.15585442544872,0,0,0,0,0.30648779579902,2.55404700141215,2.1552114800404,0,0,0.423863802319124,0.900273288253207,0.103052529238439,0,0,0.506328996723799,0.194874010322397,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.703702806881416,0,0,1.03993478527958,0,0,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.646358578788889,0,2.535908257668,0.531876233169741,0,0,0,0.799266537048298,0.57191197463259,0,0,0.977208552881205,0.355391948742546,0.791951872933429,0.301439377059586,0,0.599837947092342,0,0,0,0,1.14861935834114,0,0.579125226670317,1.02738161275192,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.512556597022804,0,0.160853921143607,2.96836132889982,1.07946785661859,1.24293207719189,0,5.71179872101983,0.116210378459959,0,0.200506470303285,0,0.34444334449382,0.364182336013434,0.655622074797121,0,0,0,0,0.633309773357254,0,0.170093705276516,0.863663664408557,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,4.32772248920434,0,0,0,0,4.82051789532479,0,0.462145851343933,0.307007349452259,0.551346289938122,0.107420244868274,0,0.596586391912706,0,0.330569830721956,0,0.638063562472921,0.2023155617111,0,0.62962469366128,1.3940745403212,3.38836938193698,4.7907542728532,6.08953094452551,9.08088673609208,2.14687330112987,0,1.2655176988749,1.71567174531442,0,0,0.636406495851874,7.8494864019923,0.179872457583315,1.09814811894422,2.94531005864216,2.02182481573316,0,14.7440459683643,0,19.9845061497653,14.7910205459458,0.136499911407986,3.67654123079653,2.26016233240486,2.75682671773062,7.29782872765342,11.3997230165978,0.578775534266688,0,4.26111791621678,1.54911749049875,5.63391205064483,0.430234056612155,0,4.63672366925625,2.83808851256478,0.211107635297664,0,0,0,0.192444225451024,0,0,4.89547764039252,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,3.33926115068718,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.210998064528027,14.5277199261641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0.451961481561065,0,3.17943378724783,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,5.04419836959365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25501137532991,0,0,0,0,4.3439968140297,6.04955043840887,16.9825427256893,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.50313580350515,0.889811221596536,0.686520205190771,0.151230923763239,2.95330681107283,10.2020053492847,9.39850926265844,1.34940933649081,4.34736279253526,14.9294234822708,3.72178400381193,1.04349012362347,0.901545653983311,1.14241563650639,2.03435366602331,2.90957854724095,4.18901172465705,4.17630383890644,2.3885753321917,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.489473409012935,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,2.76158925377761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.894336993477167,0.535701835878287,0,0,0,16.0551289994376,0,0,0,0,0.118193840883968,0,0,0,0,0,4.75040700680967,0,0.571812353413251,0,0.697448552208751,0,0,0,0,0,0,0.591660003652827,0.340853619036631,0,0,0,0,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22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| |||
|short_description=p@chr7:93518492..93518540,- | |||
}} |
Revision as of 17:53, 22 January 2014
Short description: | p@chr7:93518492..93518540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518492..93518540, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.45e-37 | 32 |
smooth muscle cell | 4.36e-37 | 43 |
smooth muscle myoblast | 4.36e-37 | 43 |
muscle precursor cell | 1.23e-29 | 58 |
myoblast | 1.23e-29 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-29 | 58 |
muscle cell | 1.64e-29 | 55 |
electrically responsive cell | 8.12e-26 | 61 |
electrically active cell | 8.12e-26 | 61 |
smooth muscle cell of the subclavian artery | 2.52e-14 | 5 |
mesodermal cell | 3.45e-14 | 121 |
smooth muscle cell of the umbilical artery | 5.64e-11 | 4 |
multi fate stem cell | 6.16e-11 | 427 |
somatic stem cell | 1.44e-10 | 433 |
stem cell | 4.28e-10 | 441 |
cardiocyte | 2.83e-09 | 16 |
aortic smooth muscle cell | 1.40e-08 | 10 |
fibroblast | 8.41e-08 | 76 |
smooth muscle cell of the internal thoracic artery | 5.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.25e-24 | 14 |
female reproductive organ cancer | 3.10e-13 | 27 |
reproductive organ cancer | 4.18e-12 | 29 |