FFCP PHASE1:Hg19::chr7:84816338..84816354,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=223117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10726 | |||
|TSSclassifier=weak | |||
|UniProt=C9JYT6 | |||
|association_with_transcript=-167bp_to_ENST00000444867,uc010lee.1_5end | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_5_at_SEMA3D_5end | |||
|id=chr7:84816338..84816354,- | |||
|ontology_enrichment_celltype=CL:1000306!2.90e-07!4;CL:0002547!2.90e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000306;8.28e-21;4!CL:0002547;8.28e-21;4!CL:0002592;3.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.30e-20,4;CL:0002547,1.30e-20,4;CL:0002592,2.85e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.26e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.37e-12!84;UBERON:0002049!1.41e-11!79;UBERON:0007798!1.41e-11!79;UBERON:0000055!1.24e-10!69;UBERON:0001009!2.91e-10!113;UBERON:0004535!3.91e-10!110;UBERON:0007023!8.74e-10!115;UBERON:0000477!1.38e-09!286;UBERON:0001981!2.56e-09!60;UBERON:0007500!2.56e-09!60;UBERON:0004537!2.56e-09!60;UBERON:0006965!2.56e-09!60;UBERON:0000415!2.90e-07!4;UBERON:0007240!2.90e-07!4;UBERON:0005742!2.90e-07!4;UBERON:0005734!2.90e-07!4;UBERON:0004664!2.90e-07!4;UBERON:0004663!2.90e-07!4;UBERON:0001637!2.93e-07!42;UBERON:0003509!2.93e-07!42;UBERON:0004572!2.93e-07!42;UBERON:0004111!7.40e-07!241;UBERON:0000468!9.13e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.28e-21;4!UBERON:0000415;8.28e-21;4!UBERON:0007240;8.28e-21;4!UBERON:0005742;8.28e-21;4!UBERON:0005734;8.28e-21;4!UBERON:0004664;8.28e-21;4!UBERON:0004663;8.28e-21;4!UBERON:0004573;5.49e-11;33!UBERON:0004571;5.49e-11;33!UBERON:0001637;2.27e-10;42!UBERON:0003509;2.27e-10;42!UBERON:0004572;2.27e-10;42!UBERON:0000055;3.22e-08;65!UBERON:0002106;4.83e-08;3!UBERON:0003498;3.45e-07;3!UBERON:0005985;3.45e-07;3!UBERON:0001621;3.45e-07;3!UBERON:0002049;6.16e-07;75!UBERON:0007798;6.16e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.30e-20,4;UBERON:0007240,1.30e-20,4;UBERON:0005742,1.30e-20,4;UBERON:0005734,1.30e-20,4;UBERON:0004664,1.30e-20,4;UBERON:0004663,1.30e-20,4;UBERON:0004872,2.31e-13,83;UBERON:0004573,3.73e-13,33;UBERON:0004571,3.73e-13,33;UBERON:0000055,5.31e-13,68;UBERON:0002049,1.53e-12,78;UBERON:0007798,1.53e-12,78;UBERON:0001637,5.30e-12,42;UBERON:0003509,5.30e-12,42;UBERON:0004572,5.30e-12,42;UBERON:0004797,7.81e-12,7;UBERON:0007500,2.51e-11,59;UBERON:0001981,2.51e-11,59;UBERON:0004537,2.51e-11,59;UBERON:0006965,2.51e-11,59;UBERON:0004535,1.68e-10,109;UBERON:0001009,4.08e-10,112;UBERON:0002106,4.92e-08,3;UBERON:0004854,4.92e-08,3;UBERON:0009034,4.92e-08,3;UBERON:0002095,4.92e-08,3;UBERON:0004782,4.92e-08,3;UBERON:0003281,4.92e-08,3;UBERON:0009664,4.92e-08,3;UBERON:0002296,4.92e-08,3;UBERON:0005602,4.92e-08,3;UBERON:0001179,4.92e-08,3;UBERON:0006293,4.92e-08,3;UBERON:0001621,2.85e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.03988298880475,0.886917589850256,0.702678285545008,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,2.02608818663328,6.48804985984772,7.45775213946916,2.12801029319014,0,2.1349799145941,0.24666754841716,0.622422070799533,1.48181739276657,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.103052529238439,1.03056216018252,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,2.59859605969933,0.462985512576611,3.04406643575357,0.790204397959275,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.088048434013226,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,1.59691809095107,0,0.55597265731176,1.14499909393593,0,0,0,0,0,0,0,0,0,0,1.41527737101321,1.58510321173008,0,0,3.65570234446927,0,0.136499911407986,0.141405431953713,0,0,4.64407282668854,0.876901770507525,0,0.655894752046633,1.01455188481352,0.92947049429925,0.563391205064483,0,0.196498082026242,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.09714191347956,0,0,0,0,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,2.41981432097328,0.61214552326098,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.524545881349981,0,0.537862017998534,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,3.61569901729232,0.414239055347196,1.48849806543585,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,2.07353103920428,0,0,0.300515217994437,0,0,0.181848659202559,0,0,0.398095888698616,0,0,1.01024846629776,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,2.53413660979609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,0.3062454773532,0.128458450192919,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.444925607568277,0.313972371402056,0,0,4.56579360254748,0,0,0.285906176706625,0,0,45.3770090709732,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.671132590786754,0,0.121917924982269,0,0.102662806856247,0,2.4285549652957,0,0,6.65952508354384,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,8.27058478222711,6.57470457330487,0,0,0,0,0,1.37618785021362,0,0.473314686579554,0,0.436350690340377,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0.426467963801962,3.80903090341985,0,0.0620747142958579,0,1.01835453245064,8.48892193624521,0.217716747896961,0,0.134704106029175,0.143444410785353,2.32862249582209,0,0,0,0,0,0.855690109280065,0,0.665756774185513,2.61655931668334,0 | |||
|short_description=p5@SEMA3D | |||
}} |
Revision as of 17:41, 22 January 2014
Short description: | p5@SEMA3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA3D_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | -167bp_to_ENST00000444867, uc010lee.1_5end |
EntrezGene: | SEMA3D |
HGNC: | 10726 |
UniProt: | C9JYT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.30e-20 | 4 |
fibroblast of the aortic adventitia | 1.30e-20 | 4 |
smooth muscle cell of the coronary artery | 2.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.30e-20 | 4 |
tunica adventitia of artery | 1.30e-20 | 4 |
adventitia | 1.30e-20 | 4 |
tunica adventitia of blood vessel | 1.30e-20 | 4 |
aorta tunica adventitia | 1.30e-20 | 4 |
aorta wall | 1.30e-20 | 4 |
splanchnic layer of lateral plate mesoderm | 2.31e-13 | 83 |
systemic artery | 3.73e-13 | 33 |
systemic arterial system | 3.73e-13 | 33 |
vessel | 5.31e-13 | 68 |
vasculature | 1.53e-12 | 78 |
vascular system | 1.53e-12 | 78 |
artery | 5.30e-12 | 42 |
arterial blood vessel | 5.30e-12 | 42 |
arterial system | 5.30e-12 | 42 |
blood vessel layer | 7.81e-12 | 7 |
epithelial tube open at both ends | 2.51e-11 | 59 |
blood vessel | 2.51e-11 | 59 |
blood vasculature | 2.51e-11 | 59 |
vascular cord | 2.51e-11 | 59 |
cardiovascular system | 1.68e-10 | 109 |
circulatory system | 4.08e-10 | 112 |
spleen | 4.92e-08 | 3 |
gastrointestinal system mesentery | 4.92e-08 | 3 |
stomach region | 4.92e-08 | 3 |
mesentery | 4.92e-08 | 3 |
gastrointestinal system serosa | 4.92e-08 | 3 |
mesentery of stomach | 4.92e-08 | 3 |
gut mesentery | 4.92e-08 | 3 |
dorsal mesentery | 4.92e-08 | 3 |
dorsal mesogastrium | 4.92e-08 | 3 |
peritoneal cavity | 4.92e-08 | 3 |
spleen primordium | 4.92e-08 | 3 |
coronary artery | 2.85e-07 | 3 |