FFCP PHASE1:Hg19::chr7:73483368..73483378,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=257bp_to_M26867_5end | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_21_at_ELN_5end | |||
|id=chr7:73483368..73483378,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.57e-13!75;CL:0002620!8.60e-10!23;CL:0000136!2.23e-08!15;CL:0002615!3.75e-08!3;CL:0002580!5.03e-08!3;CL:0002579!2.42e-07!3;CL:0000055!2.87e-07!180;CL:0000135!8.24e-07!3;CL:0000386!8.24e-07!3;CL:0000388!8.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.81e-19;3!CL:0002580;5.25e-19;3!CL:0002617;3.34e-13;2!CL:0002334;1.68e-12;12!CL:0000136;9.37e-12;13!CL:0002579;5.61e-09;3!CL:0000511;3.72e-07;1!CL:0002625;3.72e-07;1!CL:0000216;3.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.66e-19,3;CL:0002580,3.67e-19,3;CL:0002617,3.67e-13,2;CL:0002334,1.14e-12,12;CL:0000136,3.76e-10,15;CL:0002579,3.77e-09,3;CL:0000057,8.24e-09,76;CL:0000511,2.23e-07,1;CL:0002625,2.23e-07,1;CL:0000216,2.23e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!5.43e-14!12;UBERON:0000042!5.43e-14!12;UBERON:0003688!8.17e-14!6;UBERON:0002358!8.17e-14!6;UBERON:0003684!8.17e-14!6;UBERON:0001178!8.17e-14!6;UBERON:0002097!7.81e-08!40;UBERON:0001443!2.66e-07!11;UBERON:0000043!8.24e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.44e-25;6!UBERON:0002358;1.44e-25;6!UBERON:0003684;1.44e-25;6!UBERON:0001178;1.44e-25;6!UBERON:0004457;3.42e-24;9!UBERON:0000042;3.42e-24;9!UBERON:0001443;2.46e-19;11!UBERON:0000310;3.97e-15;10!UBERON:0001136;3.72e-07;1!UBERON:0001343;3.72e-07;1!UBERON:0002426;3.72e-07;1!UBERON:0003831;3.72e-07;1!UBERON:0003898;3.72e-07;1!UBERON:0004830;3.72e-07;1!UBERON:0003830;3.72e-07;1!UBERON:0005175;3.72e-07;1!UBERON:0001774;3.72e-07;1!UBERON:0004910;3.72e-07;1!UBERON:0004813;3.72e-07;1!UBERON:0001103;3.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.13e-26,6;UBERON:0002358,8.13e-26,6;UBERON:0003684,8.13e-26,6;UBERON:0001178,8.13e-26,6;UBERON:0001443,1.69e-19,11;UBERON:0004457,3.44e-18,12;UBERON:0000042,3.44e-18,12;UBERON:0000310,3.49e-15,10;UBERON:0001136,2.23e-07,1;UBERON:0001343,2.23e-07,1;UBERON:0004910,2.23e-07,1;UBERON:0005154,2.23e-07,1;UBERON:0005295,2.23e-07,1;UBERON:0004813,2.23e-07,1;UBERON:0005297,2.23e-07,1;UBERON:0005294,2.23e-07,1;UBERON:0010141,2.23e-07,1;UBERON:0005891,2.23e-07,1;UBERON:0002426,2.37e-07,1;UBERON:0003831,2.37e-07,1;UBERON:0003898,2.37e-07,1;UBERON:0004830,2.37e-07,1;UBERON:0003830,2.37e-07,1;UBERON:0005175,2.37e-07,1;UBERON:0001774,2.37e-07,1;UBERON:0001103,2.37e-07,1;UBERON:0010084,2.37e-07,1;UBERON:0004458,7.35e-07,49 | |||
|phase1_expression=1.2717486548939,11.5614282901131,2.39622486963151,4.00293193412522,3.12872766099101,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.860509862246441,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48360157567134,0,0,0,0,0,0,1.22595118319608,1.20190447125277,0,1.25572744982203,0.213557388818567,0,0.600182192168805,0,1.28820270022815,0,0.168776332241266,0.584622030967192,0.504867548488229,0.0920498986422993,0.161646056818812,1.06502877754984,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.24900292158013,0.473107245101804,0,0,2.27407504055985,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,1.48864684691266,2.30192959932094,5.3325417942284,0.256278298511402,2.04682899626681,1.93024705372329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.79323189425963,0,0,0,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.971421986118279,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,0.849635573439084,0,0.45120521581504,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,1.11598505450025,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.714193294391221,0.0645889098360061,0,0,0,0.202117188958219,0,0.684466602170562,0,0,1.33064142618405,0,0,0,0,0,0,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p21@ELN | |||
}} |
Revision as of 17:22, 22 January 2014
Short description: | p21@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | 257bp_to_M26867_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.66e-19 | 3 |
preadipocyte of the breast | 3.67e-19 | 3 |
adipocyte of breast | 3.67e-13 | 2 |
preadipocyte | 1.14e-12 | 12 |
fat cell | 3.76e-10 | 15 |
omentum preadipocyte | 3.77e-09 | 3 |
fibroblast | 8.24e-09 | 76 |
androgen binding protein secreting cell | 2.23e-07 | 1 |
seminiferous tubule epithelial cell | 2.23e-07 | 1 |
Sertoli cell | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.13e-26 | 6 |
peritoneum | 8.13e-26 | 6 |
abdominal cavity | 8.13e-26 | 6 |
visceral peritoneum | 8.13e-26 | 6 |
chest | 1.69e-19 | 11 |
cavity lining | 3.44e-18 | 12 |
serous membrane | 3.44e-18 | 12 |
breast | 3.49e-15 | 10 |
mesothelium | 2.23e-07 | 1 |
seminiferous tubule of testis | 2.23e-07 | 1 |
epithelium of male gonad | 2.23e-07 | 1 |
epithelial cord | 2.23e-07 | 1 |
sex cord | 2.23e-07 | 1 |
seminiferous tubule epithelium | 2.23e-07 | 1 |
testis sex cord | 2.23e-07 | 1 |
genital ridge | 2.23e-07 | 1 |
primitive sex cord of indifferent gonad | 2.23e-07 | 1 |
coelomic epithelium | 2.23e-07 | 1 |
chest muscle | 2.37e-07 | 1 |
respiratory system muscle | 2.37e-07 | 1 |
skeletal muscle of trunk | 2.37e-07 | 1 |
respiratory system skeletal muscle | 2.37e-07 | 1 |
thoracic segment muscle | 2.37e-07 | 1 |
chest organ | 2.37e-07 | 1 |
muscle of trunk | 2.37e-07 | 1 |
diaphragm | 2.37e-07 | 1 |
future diaphragm | 2.37e-07 | 1 |
body cavity or lining | 7.35e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.52e-07 | 1 |