FFCP PHASE1:Hg19::chr7:14026114..14026117,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z9P2,E9PHB1,F5GXR2,B7Z2C9,P50549,B7Z618 | |||
|association_with_transcript=21bp_to_ENST00000399357,ENST00000403527,ENST00000420159,NM_001163150,NM_001163151,NM_001163152,uc011jxn.1,uc011jxo.1,uc011jxp.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_56_at_ETV1_5end | |||
|id=chr7:14026114..14026117,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.20e-118;3 | |||
|ontology_enrichment_disease=DOID:0050619!2.16e-09!1;DOID:1357!2.16e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.46e-21!57;UBERON:0005068!5.46e-21!57;UBERON:0006241!5.46e-21!57;UBERON:0007135!5.46e-21!57;UBERON:0002616!3.25e-20!59;UBERON:0000955!9.92e-17!69;UBERON:0006238!9.92e-17!69;UBERON:0001017!3.61e-16!82;UBERON:0005743!2.55e-15!86;UBERON:0002780!6.62e-14!41;UBERON:0001890!6.62e-14!41;UBERON:0006240!6.62e-14!41;UBERON:0000073!1.15e-13!94;UBERON:0001016!1.15e-13!94;UBERON:0003080!1.50e-13!42;UBERON:0001893!2.03e-13!34;UBERON:0003075!3.12e-13!86;UBERON:0007284!3.12e-13!86;UBERON:0002037!3.34e-13!6;UBERON:0006215!3.34e-13!6;UBERON:0007023!5.98e-13!115;UBERON:0000200!1.31e-12!6;UBERON:0002346!1.50e-12!90;UBERON:0000033!1.02e-11!123;UBERON:0004733!3.01e-11!12;UBERON:0002028!3.01e-11!12;UBERON:0007277!3.01e-11!12;UBERON:0000153!4.69e-11!129;UBERON:0007811!4.69e-11!129;UBERON:0001869!4.70e-11!32;UBERON:0002791!1.06e-10!33;UBERON:0004732!2.15e-10!13;UBERON:0002702!9.44e-10!1;UBERON:0001950!2.03e-09!20;UBERON:0001764!2.16e-09!1;UBERON:0001825!2.16e-09!1;UBERON:0002902!2.35e-09!1;UBERON:0009899!2.35e-09!1;UBERON:0002581!2.55e-09!1;UBERON:0001882!2.77e-09!1;UBERON:0005403!2.77e-09!1;UBERON:0007190!4.87e-09!1;UBERON:0003076!5.03e-09!15;UBERON:0003057!5.03e-09!15;UBERON:0004121!5.03e-09!169;UBERON:0002336!5.28e-09!1;UBERON:0001018!5.28e-09!1;UBERON:0002473!5.28e-09!1;UBERON:0005340!5.28e-09!1;UBERON:0002316!5.28e-09!1;UBERON:0003544!5.28e-09!1;UBERON:0001020!5.28e-09!1;UBERON:0005970!5.28e-09!1;UBERON:0002437!5.28e-09!1;UBERON:0003056!5.35e-09!61;UBERON:0002680!5.77e-09!9;UBERON:0001895!5.77e-09!9;UBERON:0010092!5.77e-09!9;UBERON:0000924!9.39e-09!173;UBERON:0006601!9.39e-09!173;UBERON:0002619!1.39e-08!22;UBERON:0002020!9.04e-08!34;UBERON:0003528!9.04e-08!34;UBERON:0000025!1.40e-07!194;UBERON:0000956!1.43e-07!25;UBERON:0000203!1.43e-07!25;UBERON:0002021!2.36e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.22e-59;6!UBERON:0002680;3.80e-40;9!UBERON:0001895;3.80e-40;9!UBERON:0004733;2.22e-30;12!UBERON:0002028;2.22e-30;12!UBERON:0004732;4.00e-28;13!UBERON:0002702;5.15e-21;2!UBERON:0001870;1.71e-14;3!UBERON:0000073;7.43e-10;53!UBERON:0002616;7.43e-10;53!UBERON:0000200;6.55e-08;6!UBERON:0000955;1.09e-07;68!UBERON:0001016;8.49e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.96e-60,6;UBERON:0006215,9.96e-60,6;UBERON:0002680,3.32e-40,9;UBERON:0001895,3.32e-40,9;UBERON:0010092,3.32e-40,9;UBERON:0004733,2.01e-30,12;UBERON:0002028,2.01e-30,12;UBERON:0007277,2.01e-30,12;UBERON:0004732,3.65e-28,13;UBERON:0003076,1.52e-24,15;UBERON:0003057,1.52e-24,15;UBERON:0002702,4.66e-21,2;UBERON:0001870,1.60e-14,3;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0001017,2.54e-08,81;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86;UBERON:0000200,6.34e-08,6;UBERON:0001016,1.45e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,2.65390223834939,1.77328571372128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p56@ETV1 | |||
}} |
Revision as of 15:45, 22 January 2014
Short description: | p56@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_56_at_ETV1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 21bp_to_ENST00000399357, ENST00000403527, ENST00000420159, NM_001163150, NM_001163151, NM_001163152, uc011jxn.1, uc011jxo.1, uc011jxp.1_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | B7Z9P2E9PHB1F5GXR2B7Z2C9P50549B7Z618 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
regional part of metencephalon | 3.32e-40 | 9 |
metencephalon | 3.32e-40 | 9 |
future metencephalon | 3.32e-40 | 9 |
segmental subdivision of hindbrain | 2.01e-30 | 12 |
hindbrain | 2.01e-30 | 12 |
presumptive hindbrain | 2.01e-30 | 12 |
segmental subdivision of nervous system | 3.65e-28 | 13 |
posterior neural tube | 1.52e-24 | 15 |
chordal neural plate | 1.52e-24 | 15 |
middle frontal gyrus | 4.66e-21 | 2 |
frontal cortex | 1.60e-14 | 3 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
central nervous system | 2.54e-08 | 81 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
gyrus | 6.34e-08 | 6 |
nervous system | 1.45e-07 | 89 |