FFCP PHASE1:Hg19::chr7:2697935..2697953,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C716 | |||
|description=CAGE_peak_at_chr7:2697935..2697953,+ | |||
|id=chr7:2697935..2697953,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.07e-16!248;CL:0000220!7.71e-16!246;CL:0000144!1.45e-13!625;CL:0000548!2.74e-12!679;CL:0000004!2.74e-12!679;CL:0000255!2.74e-12!679;CL:0000055!5.51e-12!180;CL:0000012!1.16e-11!682;CL:0002371!1.33e-11!591;CL:0000222!7.64e-10!119;CL:0000221!1.68e-09!71;CL:0000133!3.12e-08!59;CL:0000003!9.67e-08!722;CL:0000075!2.03e-07!27;CL:0000147!3.38e-07!14;CL:0000066!4.29e-07!254;CL:0000333!9.70e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000075;7.33e-09;27!CL:0000147;2.26e-08;14!CL:0000710;4.89e-08;20!CL:1000449;9.33e-08;15!CL:0000115;1.60e-07;36!CL:1000497;2.40e-07;17!CL:0002518;2.40e-07;17!CL:0000148;4.35e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.18e-12,250;CL:0000075,2.93e-09,27;CL:0000221,8.15e-09,72;CL:0000147,9.69e-09,14;CL:0000710,1.87e-08,20;CL:0000222,3.58e-08,121;CL:0000115,4.81e-08,36;CL:1000449,7.44e-08,15;CL:0000133,1.01e-07,59;CL:0002077,1.47e-07,34;CL:1000497,1.91e-07,17;CL:0002518,1.91e-07,17;CL:0002078,3.88e-07,45;CL:0000213,4.16e-07,58;CL:0000215,4.16e-07,58;CL:0000148,4.39e-07,10;CL:0000541,4.39e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.58e-12!659;UBERON:0000119!9.64e-11!312;UBERON:0000922!1.14e-10!612;UBERON:0000467!1.43e-10!625;UBERON:0000480!2.50e-10!626;UBERON:0000483!3.94e-10!309;UBERON:0000923!1.14e-09!604;UBERON:0005291!1.14e-09!604;UBERON:0006598!1.14e-09!604;UBERON:0002532!1.14e-09!604;UBERON:0002050!1.94e-09!605;UBERON:0005423!1.94e-09!605;UBERON:0003914!1.74e-07!118;UBERON:0002049!1.77e-07!79;UBERON:0007798!1.77e-07!79;UBERON:0005256!4.38e-07!143;UBERON:0000477!6.48e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.33e-08;15!UBERON:0004819;9.33e-08;15!UBERON:0001285;9.33e-08;15!UBERON:0007684;9.33e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.44e-08,15;UBERON:0009773,7.44e-08,15;UBERON:0001231,7.44e-08,15;UBERON:0001285,7.44e-08,15;UBERON:0007684,7.44e-08,15;UBERON:0004208,7.44e-08,15;UBERON:0002049,2.63e-07,78;UBERON:0007798,2.63e-07,78;UBERON:0000119,3.17e-07,309;UBERON:0006555,4.26e-07,16;UBERON:0004819,4.26e-07,16 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0.491467873003018,1.39560233594486,0.218441372130172,1.58260186937072,1.36142988256051,0.331397375727916,2.01697543935533,1.80808358407193,0.730310090387373,1.46379839637152,1.60057375499824,5.10001728110633,3.13454721478088,1.71741592278634,2.73748850145768,4.14290710662849,1.98674854944673,1.9704141467987,0.865818594450472,0,0,0.154816123316076,0,1.50602959389125,0.369754010166788,0,0.142169232487422,0,0,1.80490002723128,0.434021741431704,1.11957737119962,1.29557466407592,1.80302897343931,2.32637182047304,0.755751887377619,1.21292030593908,1.85943229524548,1.6446715520873,0.929119112685311,2.01384674625505,1.0246428261164,0,1.03423704220986,0,0,4.1413314699373,1.09162460023138,0.224723484445085,2.14258724659632,0,1.91801137739712,0.989553900560148,0.598390972864896,0.852449501065388,2.61188314765726,1.70215567407342,0,1.50749199154046,2.60741459210101,0.217188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0.633765858935825,0.850417199860174,0,0.112328631146495,0.300353785683013,0.48217676009124,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0,0,1.41802225746102,2.4390233720882,1.58102614247627,0.654895377488563,1.45718115317017,0.370784442784429,0.324547393654683,0.348259474598534,4.65352861816028,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,5.45349267072878,5.50236083880135,3.9709043641994,0.516833518338658,1.77883131343355,0.66944122552934,0.805658634218294,0,4.14905497831888,1.10298924103761,5.67099363517232,1.96459402224975,0,0.675668882899933,0,0,2.74802615895611,0,0,0.872188104285069,1.49091585508596,1.77282716330412,0.132409180813219,1.72101972449288,1.41867352879343,1.12135520028461,2.1349799145941,7.64669400093196,0,0.942974704487816,1.30769522490767,1.05950199351452,0,1.40592859100278,0.624320153660641,0,0.896692083310806,1.05691048779388,0.485618833104395,0.842704840213491,0.204154171254893,2.21101771161182,1.65321249881225,1.18800285728205,1.97813543422845,0,5.03032699271367,0.673344455816265,3.25308151667107,0,0.438977620880838,0.919463387397059,0.600952235626387,0.567160915800105,0.717558542755448,1.2813443329114,1.27159140695737,0.900273288253207,0.618315175430633,0.515281080091258,0.930584281657949,0.337552664482532,1.26668106709558,0.504867548488229,0.644349290496095,1.13152239773168,0.355009592516614,0.302256294682921,1.3564847384839,0.193260853163297,0.545492241181669,0,1.70763188581434,0.927708378250397,1.04574548582567,1.55491582523056,1.7662459561294,0,3.12899064659632,4.5026865673502,1.38134921352481,0.464367928031979,0.721879481669586,1.0647612003586,1.34867752062481,0.482022059766964,0.772057809126758,1.08939722046203,1.42362371466658,1.07865046528132,0.392442930250692,0,8.11971000087113,5.60967095213783,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,0.441463099414651,0.368965315629341,1.3725424823882,1.64625428112938,1.1240175325762,1.3068766413512,1.20364978706088,1.3032332212413,2.07986957055916,1.44331342025273,1.39116485970092,0.587043471179108,2.16549671641611,0.462985512576611,2.47330397904978,0.790204397959275,0,0.492434012174795,1.8720341211139,4.01304138179566,0,1.51183915378974,0.850650583454319,0.447792613514241,0,0.766765358330422,0.492663237895943,0.616339038092582,0.414656231081544,0.576479813667846,0,13.6520472728163,13.751583320098,16.4104426094066,6.84289784090821,6.37530454760606,0.901029173531752,8.86061941154792,1.34557301214433,1.74384027533312,1.6134422880609,0.517086863031111,0,0,2.12750493267896,2.08014873822732,0.514414748524284,2.83698264046557,1.5985330740966,1.00084595560703,1.62786481617433,1.64648067356154,0,0,0.791951872933429,0.301439377059586,0,1.99945982364114,1.2162378064119,11.5519131029389,6.32501818449095,0.479249710983165,1.14861935834114,0,0.434343920002738,2.05476322550383,0.179060963239896,0.112085143993527,0,0.215627574859517,0.385029108839245,3.30323011489202,0,0,1.00509759200609,1.91381625495949,0,0,0,1.47229790062968,4.00136416847742,0.542530047399471,1.87173775377726,2.67643483195743,2.99634588564476,1.52283839490527,0.902838299183157,0,1.03473071292505,2.65690239414175,0.737476674166813,1.30325421702124,2.15381273209015,2.74514739048685,0.620304078368662,1.2942852049117,1.17400313583789,0,1.66435439510497,3.0239029332968,0.496215615637554,0,1.40330047216537,0.768834895534206,0,0.64341568457443,0,2.62156479464514,2.30830242907065,0.98552587216571,6.75030757938707,1.97557643381931,1.20859449591622,2.6065841139427,0.552485933615378,1.14814448164607,3.27764102412091,2.49136388422906,0.902399225814824,1.30926073077505,3.92174884588428,2.92278449306521,2.21658420675039,7.96133688496276,1.360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| |||
|short_description=p@chr7:2697935..2697953,+ | |||
}} |
Revision as of 15:28, 22 January 2014
Short description: | p@chr7:2697935..2697953, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2697935..2697953, + |
Coexpression cluster: | C716_Melanocyte_Monocytederived_melanoma_Macrophage_Renal_CD14_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.18e-12 | 250 |
columnar/cuboidal epithelial cell | 2.93e-09 | 27 |
ectodermal cell | 8.15e-09 | 72 |
pigment cell | 9.69e-09 | 14 |
neurecto-epithelial cell | 1.87e-08 | 20 |
mesodermal cell | 3.58e-08 | 121 |
endothelial cell | 4.81e-08 | 36 |
epithelial cell of nephron | 7.44e-08 | 15 |
neurectodermal cell | 1.01e-07 | 59 |
ecto-epithelial cell | 1.47e-07 | 34 |
kidney cell | 1.91e-07 | 17 |
kidney epithelial cell | 1.91e-07 | 17 |
meso-epithelial cell | 3.88e-07 | 45 |
lining cell | 4.16e-07 | 58 |
barrier cell | 4.16e-07 | 58 |
melanocyte | 4.39e-07 | 10 |
melanoblast | 4.39e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.44e-08 | 15 |
renal tubule | 7.44e-08 | 15 |
nephron tubule | 7.44e-08 | 15 |
nephron | 7.44e-08 | 15 |
uriniferous tubule | 7.44e-08 | 15 |
nephrogenic mesenchyme | 7.44e-08 | 15 |
vasculature | 2.63e-07 | 78 |
vascular system | 2.63e-07 | 78 |
cell layer | 3.17e-07 | 309 |
excretory tube | 4.26e-07 | 16 |
kidney epithelium | 4.26e-07 | 16 |