FFCP PHASE1:Hg19::chr7:1980055..1980065,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6762 | |||
|TSSclassifier=strong | |||
|UniProt=C9JKI7 | |||
|association_with_transcript=119bp_to_ENST00000437877,uc003sld.1_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_8_at_MAD1L1_5end | |||
|id=chr7:1980055..1980065,- | |||
|ontology_enrichment_celltype=CL:0000738!2.00e-25!140;CL:0000037!2.42e-23!172;CL:0000566!2.42e-23!172;CL:0000988!3.06e-21!182;CL:0002087!4.86e-21!119;CL:0002031!1.10e-20!124;CL:0002032!3.63e-19!165;CL:0000837!3.63e-19!165;CL:0000084!2.45e-16!25;CL:0000827!2.45e-16!25;CL:0000791!1.05e-15!18;CL:0000789!1.05e-15!18;CL:0002420!1.05e-15!18;CL:0002419!1.05e-15!18;CL:0000790!1.05e-15!18;CL:0000624!1.88e-14!6;CL:0000838!1.04e-11!52;CL:0000542!2.18e-11!53;CL:0000051!2.18e-11!53;CL:0002057!2.73e-11!42;CL:0000860!3.09e-10!45;CL:0000557!6.49e-10!71;CL:0002009!3.00e-09!65;CL:0000766!6.20e-09!76;CL:0000763!6.26e-09!112;CL:0000049!6.26e-09!112;CL:0000898!2.64e-08!3;CL:0000839!3.88e-08!70;CL:0002393!5.28e-08!9;CL:0002397!5.28e-08!9;CL:0000219!8.82e-08!390;CL:0002194!1.14e-07!63;CL:0000576!1.14e-07!63;CL:0000040!1.14e-07!63;CL:0000559!1.14e-07!63;CL:0000842!2.28e-07!3;CL:0000875!3.66e-07!3;CL:0002396!3.66e-07!3;CL:0000623!4.73e-07!3;CL:0000825!4.73e-07!3;CL:0000784!6.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;2.69e-33;6!CL:0000898;3.57e-25;3!CL:0000815;8.69e-18;2!CL:0000792;8.69e-18;2!CL:0002677;8.69e-18;2!CL:0000791;1.20e-15;18!CL:0000789;1.20e-15;18!CL:0002419;1.20e-15;18!CL:0000084;3.87e-11;25!CL:0000895;3.67e-09;1!CL:0000542;2.69e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.70e-33,6;CL:0000898,2.58e-25,3;CL:0000815,9.07e-18,2;CL:0000792,9.07e-18,2;CL:0002677,9.07e-18,2;CL:0000791,1.17e-15,18;CL:0000789,1.17e-15,18;CL:0002420,1.17e-15,18;CL:0002419,1.17e-15,18;CL:0000790,1.17e-15,18;CL:0000084,3.81e-11,25;CL:0000827,3.81e-11,25;CL:0000838,4.20e-11,52;CL:0000542,7.21e-11,53;CL:0000051,7.21e-11,53;CL:0000810,2.55e-09,1;CL:0000895,2.55e-09,1;CL:0002436,2.55e-09,1;CL:0002427,2.55e-09,1;CL:0002428,2.55e-09,1;CL:0002429,2.55e-09,1;CL:0002433,2.55e-09,1;CL:0002431,2.55e-09,1;CL:0002432,2.55e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-15;18!CL:0002427;3.67e-09;1!CL:0000051;2.69e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.33e-16;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.68e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-12!102;UBERON:0003061!1.78e-12!102;UBERON:0002193!1.24e-10!112;UBERON:0001474!6.11e-09!86;UBERON:0002371!3.64e-08!80;UBERON:0002370!3.74e-08!4;UBERON:0005058!3.74e-08!4;UBERON:0009113!3.74e-08!4;UBERON:0003295!3.74e-08!4;UBERON:0005562!3.74e-08!4;UBERON:0002405!5.63e-07!115;UBERON:0004765!9.83e-07!101;UBERON:0001434!9.83e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.449446968890169,0,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0.949387162322653,0,0,0,0.112328631146495,0.150176892841506,0,2.28010194992999,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,2.34894875748376,1.14681968437569,2.64342657158052,0.560508562981536,0,0.983548850569165,1.17903228824749,1.23360899399706,0.334372990781356,6.51844533267181,5.6813736688168,5.84480185223734,0.779873198196215,4.41908861212256,4.87374568083967,3.5204502289452,0.896639238079726,0.390178042679635,0.493313713811028,0.276350017785848,0,2.96573126324121,1.60524496853828,2.09071047609954,0.566546713487831,1.91610246800961,2.06176467289578,1.01207876807801,0,0,0,0,0.127986611154418,2.49861453104692,0,0,0.80642697289893,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0,0,0.63497894292169,0,0,1.71072446022705,0.411309970813294,1.50171528921959,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,1.2937654491571,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.399158742865633,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21319294033318,1.99825733481477,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MAD1L1 | |||
}} |
Revision as of 15:25, 22 January 2014
Short description: | p8@MAD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MAD1L1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 119bp_to_ENST00000437877, uc003sld.1_5end |
EntrezGene: | MAD1L1 |
HGNC: | 6762 |
UniProt: | C9JKI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.70e-33 | 6 |
naive T cell | 2.58e-25 | 3 |
regulatory T cell | 9.07e-18 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.07e-18 | 2 |
naive regulatory T cell | 9.07e-18 | 2 |
mature alpha-beta T cell | 1.17e-15 | 18 |
alpha-beta T cell | 1.17e-15 | 18 |
immature T cell | 1.17e-15 | 18 |
mature T cell | 1.17e-15 | 18 |
immature alpha-beta T cell | 1.17e-15 | 18 |
T cell | 3.81e-11 | 25 |
pro-T cell | 3.81e-11 | 25 |
lymphoid lineage restricted progenitor cell | 4.20e-11 | 52 |
lymphocyte | 7.21e-11 | 53 |
common lymphoid progenitor | 7.21e-11 | 53 |
CD4-positive, alpha-beta thymocyte | 2.55e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.55e-09 | 1 |
mature CD4 single-positive thymocyte | 2.55e-09 | 1 |
resting double-positive thymocyte | 2.55e-09 | 1 |
double-positive blast | 2.55e-09 | 1 |
CD69-positive double-positive thymocyte | 2.55e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.55e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.55e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.55e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.68e-17 | 2 |