FFCP PHASE1:Hg19::chr6:168814057..168814071,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr6:168814057..168814071,+ | |||
|id=chr6:168814057..168814071,+ | |||
|ontology_enrichment_celltype=CL:0002573!9.30e-15!2;CL:0002541!1.15e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.24e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.16e-26;1!UBERON:0005425;8.64e-26;1!UBERON:0003056;1.60e-09;3 | |||
|ontology_enrichment_disease=DOID:1036!5.39e-21!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.15e-14!3;UBERON:0000920!1.15e-14!3;UBERON:0003124!4.35e-14!7;UBERON:0005631!3.71e-12!14;UBERON:0000158!3.71e-12!14;UBERON:0000941!4.53e-12!1;UBERON:0004904!4.53e-12!1;UBERON:0002464!4.53e-12!1;UBERON:0001021!4.53e-12!1;UBERON:0001785!4.53e-12!1;UBERON:0001282!5.62e-12!1;UBERON:0009842!5.62e-12!1;UBERON:0003704!5.62e-12!1;UBERON:0001171!5.62e-12!1;UBERON:0001172!5.62e-12!1;UBERON:0000010!4.69e-11!8;UBERON:0000478!3.60e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.64e-26;1!UBERON:0001282;8.64e-26;1!UBERON:0001785;8.64e-26;1!UBERON:0002464;8.64e-26;1!UBERON:0004904;8.64e-26;1!UBERON:0009842;8.64e-26;1!UBERON:0003704;8.64e-26;1!UBERON:0001021;8.64e-26;1!UBERON:0001171;8.64e-26;1!UBERON:0001172;8.64e-26;1!UBERON:0003714;1.29e-13;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0006915;1.24e-09;3!UBERON:0007616;1.24e-09;3!UBERON:0002217;1.24e-09;3!UBERON:0002018;1.24e-09;3!UBERON:0001280;1.60e-09;3!UBERON:0004647;1.60e-09;3!UBERON:0001987;1.31e-07;4!UBERON:0002394;1.86e-07;4!UBERON:0003928;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.62e-26,1;UBERON:0001785,7.62e-26,1;UBERON:0002464,7.62e-26,1;UBERON:0004904,7.62e-26,1;UBERON:0001021,7.62e-26,1;UBERON:0003902,7.62e-26,1;UBERON:0005425,7.62e-26,1;UBERON:0001282,1.26e-25,1;UBERON:0009842,1.26e-25,1;UBERON:0003704,1.26e-25,1;UBERON:0001171,1.26e-25,1;UBERON:0001172,1.26e-25,1;UBERON:0003714,1.21e-13,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0006915,1.30e-09,3;UBERON:0007616,1.30e-09,3;UBERON:0002217,1.30e-09,3;UBERON:0002018,1.30e-09,3;UBERON:0001280,1.81e-09,3;UBERON:0004647,1.81e-09,3;UBERON:0005171,1.81e-09,3;UBERON:0001987,1.31e-07,4;UBERON:0004340,1.31e-07,4;UBERON:0001781,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25336261431701,0,0,2.60753692612819,0.31900115973192,0.274792780205587,0,0,0,0,0.225595660617181,0.392125068635479,0.335643173951685,1.3282761290693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65267776219791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52434499509095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:168814057..168814071,+ | |||
}} |
Revision as of 15:14, 22 January 2014
Short description: | p@chr6:168814057..168814071, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:168814057..168814071, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.62e-26 | 1 |
cranial nerve | 7.62e-26 | 1 |
nerve trunk | 7.62e-26 | 1 |
nerve connecting eye with brain | 7.62e-26 | 1 |
nerve | 7.62e-26 | 1 |
retinal neural layer | 7.62e-26 | 1 |
presumptive neural retina | 7.62e-26 | 1 |
intralobular bile duct | 1.26e-25 | 1 |
acinus | 1.26e-25 | 1 |
intrahepatic bile duct | 1.26e-25 | 1 |
portal lobule | 1.26e-25 | 1 |
hepatic acinus | 1.26e-25 | 1 |
neural tissue | 1.21e-13 | 2 |
multi cell component structure | 1.21e-13 | 2 |
neuron projection bundle | 1.21e-13 | 2 |
stratified squamous epithelium | 1.30e-09 | 3 |
layer of synovial tissue | 1.30e-09 | 3 |
synovial joint | 1.30e-09 | 3 |
synovial membrane of synovial joint | 1.30e-09 | 3 |
liver parenchyma | 1.81e-09 | 3 |
liver lobule | 1.81e-09 | 3 |
hepatic duct | 1.81e-09 | 3 |
placenta | 1.31e-07 | 4 |
allantois | 1.31e-07 | 4 |
layer of retina | 1.80e-07 | 4 |