FFCP PHASE1:Hg19::chr6:160102610..160102627,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-317bp_to_BC041951_5end | |||
|coexpression_cluster_id=C954 | |||
|description=CAGE_peak_3_at_BC041951_5end | |||
|id=chr6:160102610..160102627,- | |||
|ontology_enrichment_celltype=CL:0002057!4.94e-19!42;CL:0000860!2.83e-18!45;CL:0002194!2.07e-14!63;CL:0000576!2.07e-14!63;CL:0000040!2.07e-14!63;CL:0000559!2.07e-14!63;CL:0000766!3.55e-14!76;CL:0002009!8.57e-14!65;CL:0000839!2.09e-11!70;CL:0000557!1.02e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.47e-31;33!CL:0002057;4.47e-31;33!CL:0000473;1.93e-27;39!CL:0000234;1.93e-27;39!CL:0000576;6.53e-18;48!CL:0000766;1.44e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.02e-33,48;CL:0000234,1.02e-33,48;CL:0000860,3.68e-31,42;CL:0002057,3.68e-31,42;CL:0000766,5.86e-27,72;CL:0002194,6.29e-26,59;CL:0000576,6.29e-26,59;CL:0000040,6.29e-26,59;CL:0000559,6.29e-26,59;CL:0002009,1.08e-24,61;CL:0000839,6.03e-22,66;CL:0000557,1.90e-21,67;CL:0000763,1.05e-13,108;CL:0000049,1.05e-13,108;CL:0000738,1.53e-08,136;CL:0002087,4.02e-08,115;CL:0002031,2.11e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.69e-12!102;UBERON:0003061!7.69e-12!102;UBERON:0002193!6.52e-11!112;UBERON:0002204!1.36e-10!167;UBERON:0002371!2.35e-10!80;UBERON:0001474!8.69e-09!86;UBERON:0004765!2.97e-08!101;UBERON:0001434!2.97e-08!101;UBERON:0002405!1.72e-07!115;UBERON:0000926!8.22e-07!448;UBERON:0004120!8.22e-07!448;UBERON:0006603!8.22e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.53e-23,108;UBERON:0002390,1.42e-22,98;UBERON:0003061,1.42e-22,98;UBERON:0002371,4.98e-21,76;UBERON:0002405,1.24e-18,93;UBERON:0001474,1.33e-18,82;UBERON:0001434,4.34e-17,100;UBERON:0004765,7.20e-17,90;UBERON:0003081,1.37e-14,203;UBERON:0002204,1.49e-13,167;UBERON:0000926,2.30e-12,315;UBERON:0004120,2.30e-12,315;UBERON:0006603,2.30e-12,315 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.563817616383885,3.00219895059391,0.446961094427288,0.872338524100369,0,0.631719873426831,2.08948502559871,0,0,0,0,0.247532705920093,0.331397375727916,6.05092631806598,6.02694528023977,9.49403117503585,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0.383829398097213,0.77408061658038,0,0,0,0.309868802321207,0.426507697462265,0.293600439334847,2.21598163412751,2.4065333696417,2.60413044859022,1.11957737119962,0,0.257575567634187,2.4717700592526,0,0.970336244751265,9.99444858694444,4.52284676824008,10.5300166104335,13.5215424391411,9.73410684810582,7.80391358632331,12.4108445065183,10.973239620925,65.004713565284,8.65914761895982,3.82068610080984,7.19115150224271,24.1806274973013,9.30694178520671,20.4587880255693,4.61791820261403,2.19410023383795,2.98357325372886,35.9859455899444,13.6172453925874,30.5182902007832,13.5674279238641,12.5155900420848,3.47502151528187,28.4537766237683,12.5214396235772,18.6712808590122,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0.32145117339416,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0,2.02785126545153,0,1.94653948121054,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,1.20848795132744,0,1.22031028774085,0,0,0,0,0,0,0,0,2.63560834872127,19.3890132074163,0.436094052142534,0.496971951695318,0.12663051166458,1.19168262731897,0,0.354668382198357,0,0,0.24666754841716,0,0.942974704487816,0.163461903113459,0,0,0,0.312160076830321,0,2.39117888882882,0,0,0.421352420106746,0.204154171254893,0,0,1.18800285728205,3.21447008062124,0,0,0,0,0,0,0,1.35214253015937,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,3.21620469096443,0,3.71494342425583,3.60939740834793,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,7.60530208930985,10.8110993834539,2.36315962672562,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0.462942225792648,0,0,0,0.115930404975077,0,6.20775725372617,27.31614524202,38.6215929036234,0,0,0.738651018262192,0.234004265139238,1.0404181360211,0,0.16798212819886,0.708875486211932,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.517086863031111,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0.791951872933429,3.61727252471503,0,0.899756920638513,2.43247561282381,2.51128545716063,12.6500363689819,0,0,0,0.579125226670317,1.43833425785268,0.537182889719687,0.224170287987055,0.394061520403854,0,0.641715181398742,0.254094624222463,0,0,0,0,17.2271615507852,20.9413021442817,4.55857064779639,1.47229790062968,0,0.813795071099207,0,0.535286966391485,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0,0,0.347534457872331,0,0,0.206768026122887,0.862856803274467,0.426910231213777,0,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0.511707249066704,0.804269605718038,0,0.308419387605311,0,0.492762936082855,0.519254429183621,0.232420756919918,0.120859449591622,0.40101294060657,0,0,0,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0.522870902049801,0,0.328014645699706,0,0.618246069886334,0,0.165018999841176,0.574265537996172,0,3.21367859688319,0.386682873168488,0.308097234229289,0.307007349452259,0.413509717453592,0.751941714077915,0.870100163485371,0.340906509664404,0.356128142586949,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0.929691098594572,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0.953150969619124,0,0,0.318203247925937,3.13979456079692,0.359744915166629,0,0.235624804691373,0,0,0.421258456238981,0.48763373908959,14.3790958882458,0,0.136499911407986,0.565621727814851,0,0,0.66343897524122,1.75380354101505,0,1.31178950409327,0,0,0,0.143411352204052,0.589494246078727,0.35667105148125,0,17.3108260944085,6.25660296623814,0,0,0,0,0,0.753150406214233,0.43050537267123,3.36942951335251,0,0,2.02979043692868,3.82318603571188,4.5571774973933,2.1440859791201,0.411362273086194,3.24236655596359,2.70015718619057,3.96562588147135,0,0,0.245040215981032,0,0,0.0711418433484141,0.478278818186467,0.399158742865633,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0.321176150207399,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0.222886768554957,0,0,0,0,0.994147647766298,0,2.00355669041231,0.329607748453519,0.211125408127993,1.19548792950642,0.276283915531148,0,0.409074730008619,0,0,0.0898683511473268,1.43216939740487,0,0.394573622547734,4.7896618469388,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0.32681539055697,0.278847488557207,0.153900517007594,5.69710279235006,0,0.269272933229316,0.108647371922008,0.957003479195758,0,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,1.47698645169619,0.652931232636591,0.141353071433941,0,0,0.176915129006678,0,0,0.123563938946503,0.313265848516366,0,0,0.937057782901357,0,0,0,0.789168805698781,0,0,1.13735843331278,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0,0.387025325156341,0.0730893170861856,0.0821154570532092,0.290967049465258,0,1.35588444468319,0,0.397429223405979,0.189932387867636,0,0.400794101257669,0.426905989478705,0,0,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0.837847203816763,0,3.58936512288407,0.199679000498991,3.43380838509257,0.223171457441873,0,0,0,0.157566364614447,0.247247575143499,0.404421263125109,0,0.0846733320657845,0,0.544813624446302,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.0607495566580247,0.670869375198532,2.04894838977915,0.0524545881349981,0,0.537862017998534,0,1.42939065274673,1.32418394073086,0.25426853765475,2.71499800876856,0,1.30634944043764,0,0.082092520749339,0.170388021785422,0.113312091520126,2.4913879725274,0,0.258565912723101,1.05786081394152,0,0,0.427149650270779,0.471612915298998,1.24271716604159,0,0,0,0,0,0.2506898940227,0.306345576763462,1.63936315354902,0,0,0.488105059607853,0.250381861413,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0.151649117541648,0,0.941063278792687,0,0.28984205722165,0.298509605773748,0,1.10961172300523,1.51522404220071,1.25783950876288,1.77962244319307,1.83072054717539,1.05861646634267,0.310874401165561,2.66139269981341,1.27437413730962,5.84744045812686,0.931577741257556,0.414706207840855,0.265841714557995,0,2.70463696194993,2.28483127301277,0,0.909243296012797,1.61115835563733,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,0.214441591374926,0.782982875895635,0,0,0.244736704506468,0,0,1.75427239662966,0.176689145945881,1.15748422962549,0.168942440653073,0,0.345430341731199,0.607719912354764,0.138258436151731,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,1.10463570151104,0,0.622077260032973,0,0.215649622793364,0.314531883711793,0,0.169732529954025,0,0.247871528518004,0,0,0.0788617450012534,0,0,1.531227386766,0.0642292250964595,1.41696576325585,0.159633859057151,0.82046545696302,0.504143392443436,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.693153996902029,0,0,0.198916222116275,0.225630985047772,0.20170506870352,1.56302802246618,0,0.327543835020193,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0,0.351742488719241,0.511049710558381,0,0,0.606965604236632,0.227662191351298,0,0,0.685952037749674,0.135939465953663,0.131545547125698,0.118193840883968,0,0.470958557103084,0.157115589916002,0,0,0,15.2880540123856,0.0714765441766563,0,0.23248285073625,0,0,1.86494547746733,1.3657478167516,0,0.430227358820278,0.591660003652827,0.340853619036631,0.423387050190929,0.22910686854405,1.5510319283216,0,1.11855431797792,0.196300467230486,0.121917924982269,3.23714418593947,1.95059333026869,0,1.45713297917742,0,0,0,0,0.109940516745429,0.150962843566674,0.231522474323834,0,0,0.735444965261716,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.535661815816973,0,0.240724100067505,0,2.2936464170227,1.00337708206016,0.157771562193185,0.135982980381829,0,1.5870805215462,2.60396512716726,3.69740502905135,0.432626562123789,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0,0.250707539292375,0.378893491091197,0.267964130156178,0.829169439458779,0.310298987585686,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0.202117188958219,1.74173398317569,0,0.134704106029175,1.07583308089015,0,0.162806537221949,1.60091018816573,0,0.179650404213174,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p3@BC041951 | |||
}} |
Revision as of 14:56, 22 January 2014
Short description: | p3@BC041951 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC041951_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | -317bp_to_BC041951_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.02e-33 | 48 |
phagocyte | 1.02e-33 | 48 |
classical monocyte | 3.68e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.68e-31 | 42 |
myeloid leukocyte | 5.86e-27 | 72 |
monopoietic cell | 6.29e-26 | 59 |
monocyte | 6.29e-26 | 59 |
monoblast | 6.29e-26 | 59 |
promonocyte | 6.29e-26 | 59 |
macrophage dendritic cell progenitor | 1.08e-24 | 61 |
myeloid lineage restricted progenitor cell | 6.03e-22 | 66 |
granulocyte monocyte progenitor cell | 1.90e-21 | 67 |
myeloid cell | 1.05e-13 | 108 |
common myeloid progenitor | 1.05e-13 | 108 |
leukocyte | 1.53e-08 | 136 |
nongranular leukocyte | 4.02e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.11e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.53e-23 | 108 |
hematopoietic system | 1.42e-22 | 98 |
blood island | 1.42e-22 | 98 |
bone marrow | 4.98e-21 | 76 |
immune system | 1.24e-18 | 93 |
bone element | 1.33e-18 | 82 |
skeletal system | 4.34e-17 | 100 |
skeletal element | 7.20e-17 | 90 |
lateral plate mesoderm | 1.37e-14 | 203 |
musculoskeletal system | 1.49e-13 | 167 |
mesoderm | 2.30e-12 | 315 |
mesoderm-derived structure | 2.30e-12 | 315 |
presumptive mesoderm | 2.30e-12 | 315 |