FFCP PHASE1:Hg19::chr6:144127704..144127730,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-498bp_to_ENST00000545614_5end | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_1_at_ENST00000545614_5end | |||
|id=chr6:144127704..144127730,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.32e-34!112;CL:0000049!4.32e-34!112;CL:0000557!1.20e-32!71;CL:0000839!1.26e-31!70;CL:0002009!5.89e-31!65;CL:0002194!1.11e-30!63;CL:0000576!1.11e-30!63;CL:0000040!1.11e-30!63;CL:0000559!1.11e-30!63;CL:0000766!3.02e-30!76;CL:0000860!1.18e-26!45;CL:0002057!1.27e-26!42;CL:0002320!1.27e-22!365;CL:0000134!3.89e-21!358;CL:0000048!1.30e-17!430;CL:0000988!3.06e-17!182;CL:0002032!3.57e-17!165;CL:0000837!3.57e-17!165;CL:0000723!8.07e-17!436;CL:0000219!1.25e-16!390;CL:0000037!3.44e-16!172;CL:0000566!3.44e-16!172;CL:0000034!8.43e-16!444;CL:0000738!2.20e-13!140;CL:0002031!9.78e-13!124;CL:0002087!7.09e-11!119;CL:0002371!3.02e-09!591;CL:0000063!2.70e-08!578;CL:0000990!2.89e-08!8;CL:0000144!6.12e-08!625;CL:0000548!9.62e-08!679;CL:0000004!9.62e-08!679;CL:0000255!9.62e-08!679;CL:0000012!1.64e-07!682;CL:0002334!4.00e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.24e-56;33!CL:0002057;4.24e-56;33!CL:0000473;1.94e-45;39!CL:0000234;1.94e-45;39!CL:0000576;3.30e-24;48!CL:0000766;1.75e-16;69!CL:0000990;4.64e-14;8!CL:0000763;1.57e-12;100!CL:0000451;2.66e-11;10!CL:0000453;7.09e-09;5!CL:0000840;1.19e-07;5!CL:0000738;1.92e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.40e-47,42;CL:0002057,7.40e-47,42;CL:0000473,3.03e-46,48;CL:0000234,3.03e-46,48;CL:0000763,1.11e-45,108;CL:0000049,1.11e-45,108;CL:0002009,1.27e-44,61;CL:0002194,1.82e-43,59;CL:0000576,1.82e-43,59;CL:0000040,1.82e-43,59;CL:0000559,1.82e-43,59;CL:0000557,1.14e-42,67;CL:0000839,1.01e-40,66;CL:0000766,1.45e-36,72;CL:0000988,5.47e-30,177;CL:0002032,5.01e-28,161;CL:0000837,5.01e-28,161;CL:0000037,2.45e-26,168;CL:0000738,3.08e-21,136;CL:0002031,5.05e-21,120;CL:0002087,2.61e-19,115;CL:0002320,1.71e-16,361;CL:0000134,2.85e-16,354;CL:0000990,5.21e-14,8;CL:0000219,1.54e-13,386;CL:0000048,2.94e-12,427;CL:0000723,7.06e-12,433;CL:0000034,2.18e-11,441;CL:0000451,2.91e-11,10;CL:0000453,7.90e-09,5;CL:0000840,1.19e-07,5;CL:0001029,1.19e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.96e-36;42!CL:0000049;3.69e-14;108 | |||
|ontology_enrichment_disease=DOID:1036!1.77e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.07e-12;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.09e-12,8 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.46e-32!80;UBERON:0001474!7.66e-30!86;UBERON:0004765!4.73e-28!101;UBERON:0001434!4.73e-28!101;UBERON:0002390!1.17e-27!102;UBERON:0003061!1.17e-27!102;UBERON:0002193!3.09e-25!112;UBERON:0002405!1.03e-22!115;UBERON:0002384!2.19e-22!375;UBERON:0002204!3.92e-16!167;UBERON:0003081!3.64e-14!216;UBERON:0001737!1.85e-09!9;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0003688!3.94e-07!6;UBERON:0002358!3.94e-07!6;UBERON:0003684!3.94e-07!6;UBERON:0001178!3.94e-07!6;UBERON:0002331!6.64e-07!10;UBERON:0000358!6.64e-07!10;UBERON:0000307!6.64e-07!10;UBERON:0000091!6.64e-07!10;UBERON:0000087!6.64e-07!10;UBERON:0007806!6.64e-07!10;UBERON:0008780!6.64e-07!10;UBERON:0005728!6.64e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.19e-09;9!UBERON:0000042;1.19e-09;9!UBERON:0002331;4.51e-09;10!UBERON:0003688;6.35e-07;6!UBERON:0002358;6.35e-07;6!UBERON:0003684;6.35e-07;6!UBERON:0001178;6.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-38,76;UBERON:0001474,3.81e-35,82;UBERON:0002390,1.26e-33,98;UBERON:0003061,1.26e-33,98;UBERON:0004765,4.25e-33,90;UBERON:0001434,2.04e-32,100;UBERON:0002405,7.80e-30,93;UBERON:0002193,1.55e-29,108;UBERON:0002204,2.75e-17,167;UBERON:0002384,1.95e-16,371;UBERON:0003081,2.48e-14,203;UBERON:0000926,4.37e-10,315;UBERON:0004120,4.37e-10,315;UBERON:0006603,4.37e-10,315;UBERON:0002331,3.50e-09,10;UBERON:0000358,3.50e-09,10;UBERON:0000307,3.50e-09,10;UBERON:0000091,3.50e-09,10;UBERON:0000087,3.50e-09,10;UBERON:0007010,3.50e-09,10;UBERON:0007806,3.50e-09,10;UBERON:0008780,3.50e-09,10;UBERON:0005728,3.50e-09,10;UBERON:0004457,4.96e-07,12;UBERON:0000042,4.96e-07,12;UBERON:0003688,6.69e-07,6;UBERON:0002358,6.69e-07,6;UBERON:0003684,6.69e-07,6;UBERON:0001178,6.69e-07,6 | |||
|phase1_expression=5.26867299884614,0.214100523890983,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0.32389366601898,0,0.290796477559129,1.51150377475524,0.727752183563449,4.41615170120801,7.40102198439286,9.91060386864331,12.0830804775303,12.5518746199259,26.0130452877444,7.23965929546899,16.1371170895957,12.1883837934908,1.31769637679823,6.27684145133045,4.04502272001152,8.87643287875617,9.30694178520671,5.11469700639233,1.31940520074686,3.78980949481101,1.27867425159808,19.4440189881151,32.340957807395,26.7813567068097,12.8136819280939,12.5155900420848,14.986030284653,15.1349875658342,44.5615939544953,39.2413360426697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.1686349143074,0,1.01392563272577,0,0.973269740605272,0,0,0,0,0,0,3.57002133020152,3.13433527138681,4.91944453919801,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.735326160691737,0,0.357198913136319,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0.908144565869588,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41968160047813,0.674338760312407,1.68707720918437,0.441175890929576,1.30727666455444,1.89816495288877,0.808987848960987,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,3.7440682422278,2.0808362720422,0,0,0,0,0,0,93.6060152002293,0.792435906119034,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0.823240336780769,0,1.42156779497018,1.58390374586686,0,0,0.099972991182057,0,0,0,1.4377491329495,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.828831026872071,1.47229790062968,0.500170521059677,0.542530047399471,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,2.97729369382532,0.767309866440312,0.280660094433074,0.640695746278505,2.55853624533352,1.93024705372329,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0,0,0,0,0,0.899362287916574,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,1.08073945114433,0.35667105148125,0,2.11107635297664,1.31717957183961,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,1.71752672377882,0,0.447352215784832,0.166849141711909,0,66.2606693870677,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,1.72678282034527,1.16348177330109,0.451191321234361,1.37243774022418,2.68514539161348,4.17458211993207,6.6753363171759,0,0,0,0,0,0.0884575645033392,0,9.4886761177799,2.71840665682306,3.75919018219639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,4.49947783103001,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8889235380576,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0.50313580350515,0.889811221596536,0,0,0.932623203496683,0.443565449968902,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0.537052785212442,0.464033759878494,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,4.67664741214532,2.5244319659539,1.14495775979091,0.327609848846413,0,0,2.19986135440423,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p1@ENST00000545614 | |||
}} |
Revision as of 14:23, 22 January 2014
Short description: | p1@ENST00000545614 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000545614_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | -498bp_to_ENST00000545614_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-38 | 76 |
bone element | 3.81e-35 | 82 |
hematopoietic system | 1.26e-33 | 98 |
blood island | 1.26e-33 | 98 |
skeletal element | 4.25e-33 | 90 |
skeletal system | 2.04e-32 | 100 |
immune system | 7.80e-30 | 93 |
hemolymphoid system | 1.55e-29 | 108 |
musculoskeletal system | 2.75e-17 | 167 |
connective tissue | 1.95e-16 | 371 |
lateral plate mesoderm | 2.48e-14 | 203 |
mesoderm | 4.37e-10 | 315 |
mesoderm-derived structure | 4.37e-10 | 315 |
presumptive mesoderm | 4.37e-10 | 315 |
umbilical cord | 3.50e-09 | 10 |
blastocyst | 3.50e-09 | 10 |
blastula | 3.50e-09 | 10 |
bilaminar disc | 3.50e-09 | 10 |
inner cell mass | 3.50e-09 | 10 |
cleaving embryo | 3.50e-09 | 10 |
connecting stalk | 3.50e-09 | 10 |
inner cell mass derived epiblast | 3.50e-09 | 10 |
extraembryonic mesoderm | 3.50e-09 | 10 |
cavity lining | 4.96e-07 | 12 |
serous membrane | 4.96e-07 | 12 |
omentum | 6.69e-07 | 6 |
peritoneum | 6.69e-07 | 6 |
abdominal cavity | 6.69e-07 | 6 |
visceral peritoneum | 6.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.09e-12 | 8 |