FFCP PHASE1:Hg19::chr6:130687521..130687535,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |||
|TSSclassifier=strong | |||
|UniProt=A8K2A1 | |||
|association_with_transcript=0bp_to_AK315824_5end | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_6_at_TMEM200A_5end | |||
|id=chr6:130687521..130687535,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.65e-40!180;CL:0000680!9.54e-25!57;CL:0000056!9.54e-25!57;CL:0000355!9.54e-25!57;CL:0000192!1.53e-24!42;CL:0000514!1.53e-24!42;CL:0000187!3.70e-24!54;CL:0000393!5.26e-24!60;CL:0000211!5.26e-24!60;CL:0000183!5.76e-23!59;CL:0000359!7.50e-23!32;CL:0000057!1.02e-15!75;CL:0000723!2.13e-11!436;CL:0000048!2.58e-11!430;CL:0000034!6.84e-11!444;CL:0000222!5.09e-10!119;CL:0002334!2.72e-09!12;CL:0002539!2.27e-08!10;CL:0002371!3.79e-08!591;CL:0002620!8.16e-08!23;CL:0000144!1.11e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-32;32!CL:0000192;4.74e-22;43!CL:0002334;1.22e-14;12!CL:0002539;3.96e-13;10!CL:0000187;1.48e-11;55!CL:0000393;1.68e-09;61!CL:0000211;1.68e-09;61!CL:0002595;3.36e-08;5!CL:0000134;2.15e-07;55!CL:0002620;2.72e-07;23!CL:0002594;3.24e-07;4!CL:1000306;3.81e-07;4!CL:0002547;3.81e-07;4!CL:0000048;7.65e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.10e-34,32;CL:0000192,9.60e-30,43;CL:0000514,9.60e-30,43;CL:0000187,2.77e-22,55;CL:0000680,8.38e-22,58;CL:0000056,8.38e-22,58;CL:0000355,8.38e-22,58;CL:0000393,6.25e-19,61;CL:0000211,6.25e-19,61;CL:0000048,1.02e-17,427;CL:0000723,1.30e-17,433;CL:0000034,1.12e-16,441;CL:0000057,4.44e-15,76;CL:0002334,8.73e-15,12;CL:0002539,3.28e-13,10;CL:0000222,1.37e-09,121;CL:0002595,3.23e-08,5;CL:0002594,3.15e-07,4;CL:0002620,3.66e-07,23;CL:1000306,4.12e-07,4;CL:0002547,4.12e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;4.74e-22;43!CL:0000355;3.78e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!1.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.56e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.37e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.37e-22!83;UBERON:0002329!2.37e-22!83;UBERON:0003077!2.37e-22!83;UBERON:0003059!2.37e-22!83;UBERON:0007282!2.37e-22!83;UBERON:0009618!2.37e-22!83;UBERON:0007285!2.37e-22!83;UBERON:0001134!2.96e-22!61;UBERON:0002036!2.96e-22!61;UBERON:0003082!2.96e-22!61;UBERON:0002385!1.56e-21!63;UBERON:0001015!1.56e-21!63;UBERON:0000383!1.56e-21!63;UBERON:0004290!6.08e-21!70;UBERON:0000486!1.81e-19!82;UBERON:0001637!1.46e-15!42;UBERON:0003509!1.46e-15!42;UBERON:0004572!1.46e-15!42;UBERON:0004573!4.36e-13!33;UBERON:0004571!4.36e-13!33;UBERON:0005256!4.67e-13!143;UBERON:0000475!9.60e-11!365;UBERON:0002100!6.06e-10!216;UBERON:0001981!5.56e-09!60;UBERON:0007500!5.56e-09!60;UBERON:0004537!5.56e-09!60;UBERON:0006965!5.56e-09!60;UBERON:0002049!6.78e-09!79;UBERON:0007798!6.78e-09!79;UBERON:0000490!8.94e-09!138;UBERON:0004872!1.42e-08!84;UBERON:0004237!2.27e-08!10;UBERON:0004695!2.27e-08!10;UBERON:0002111!2.27e-08!10;UBERON:0004178!2.27e-08!10;UBERON:0001135!7.18e-08!15;UBERON:0003102!3.03e-07!95;UBERON:0000055!3.18e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-21;33!UBERON:0004571;1.38e-21;33!UBERON:0001637;1.38e-17;42!UBERON:0003509;1.38e-17;42!UBERON:0004572;1.38e-17;42!UBERON:0004237;3.96e-13;10!UBERON:0004695;3.96e-13;10!UBERON:0002111;3.96e-13;10!UBERON:0004178;3.96e-13;10!UBERON:0000947;6.53e-11;21!UBERON:0010191;6.53e-11;21!UBERON:0007500;7.86e-11;56!UBERON:0001981;7.86e-11;56!UBERON:0004537;7.86e-11;56!UBERON:0001135;2.85e-09;15!UBERON:0003834;3.36e-08;5!UBERON:0001533;3.36e-08;5!UBERON:0000055;1.15e-07;65!UBERON:0002118;3.17e-07;5!UBERON:0001310;3.24e-07;4!UBERON:0004797;3.81e-07;4!UBERON:0000415;3.81e-07;4!UBERON:0007240;3.81e-07;4!UBERON:0005742;3.81e-07;4!UBERON:0005734;3.81e-07;4!UBERON:0004664;3.81e-07;4!UBERON:0004663;3.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.71e-27,42;UBERON:0003509,7.71e-27,42;UBERON:0004572,7.71e-27,42;UBERON:0004573,2.85e-24,33;UBERON:0004571,2.85e-24,33;UBERON:0001134,1.29e-19,62;UBERON:0002036,1.29e-19,62;UBERON:0003082,1.29e-19,62;UBERON:0002385,1.24e-18,64;UBERON:0001015,1.24e-18,64;UBERON:0000383,1.24e-18,64;UBERON:0007500,1.30e-18,59;UBERON:0001981,1.30e-18,59;UBERON:0004537,1.30e-18,59;UBERON:0006965,1.30e-18,59;UBERON:0007524,5.44e-17,73;UBERON:0002329,1.01e-16,71;UBERON:0003059,1.01e-16,71;UBERON:0007282,1.01e-16,71;UBERON:0004290,1.01e-16,71;UBERON:0009618,1.01e-16,71;UBERON:0003077,2.52e-16,72;UBERON:0007285,2.52e-16,72;UBERON:0000486,3.76e-16,83;UBERON:0004872,8.12e-16,83;UBERON:0000055,1.11e-15,68;UBERON:0007503,3.53e-14,78;UBERON:0004237,3.28e-13,10;UBERON:0004695,3.28e-13,10;UBERON:0002111,3.28e-13,10;UBERON:0004178,3.28e-13,10;UBERON:0002049,4.42e-13,78;UBERON:0007798,4.42e-13,78;UBERON:0000947,6.07e-11,21;UBERON:0010191,6.07e-11,21;UBERON:0004535,1.05e-09,109;UBERON:0001135,2.27e-09,15;UBERON:0001009,3.78e-09,112;UBERON:0003834,3.23e-08,5;UBERON:0001533,3.23e-08,5;UBERON:0005256,6.95e-08,122;UBERON:0003914,9.68e-08,117;UBERON:0002118,3.08e-07,5;UBERON:0001310,3.15e-07,4;UBERON:0000415,4.12e-07,4;UBERON:0007240,4.12e-07,4;UBERON:0005742,4.12e-07,4;UBERON:0005734,4.12e-07,4;UBERON:0004664,4.12e-07,4;UBERON:0004663,4.12e-07,4;UBERON:0001013,9.04e-07,14 | |||
|phase1_expression=3.08853244759946,1.71280419112787,2.67813367782345,0,1.34088328328186,2.61701557230111,2.53299878168311,1.26343974685366,0.261185628199839,0.737201809504527,0,0,0,0.123766352960047,0,5.3786011716142,3.61616716814386,5.84248072309899,3.41552959153355,0.123121058076788,0.816002764977012,0,0,0,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0.164437904603676,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,1.50401373190767,0,2.3858578411533,0.973269740605272,0.661743720148475,0.221729397462564,0.87834785693126,0.261958150995425,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,12.2831596314642,18.140057771411,27.8231522126349,7.09336764396714,1.12135520028461,0,0,0.933633106199299,0,0.817309515567294,0.302714855289863,0,0.234321431833797,0,0,2.69007624993242,0.352303495931295,0.485618833104395,0.561803226808994,0,0.368502951935304,0,0,1.48360157567134,1.82032272387605,0,0.505008341862199,0.750711119231785,0.277064115484183,0,1.22595118319608,1.20190447125277,0.567160915800105,5.91985797773244,2.13557388818567,2.33125091275518,1.20036438433761,0.515262646192195,4.12224864073007,3.7223371266318,12.8270012503362,4.28722822709274,0.757301322732344,0.828449087780694,1.61646056818812,3.19508633264953,1.0075209822764,1.01736355386293,3.09217365061275,1.09098448236334,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.857839051492628,0.219500570817251,0,2.91534019993729,0.185176890317059,0.977424915930974,0,0,0.463721619900307,2.34817388471643,0,0,0,0,0,0,0,0,1.87467667973554,0.671928512795438,2.55195175036296,0.806026704325635,0.581267877027924,4.21720947081732,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0,1.466765716419,18.4858553533622,3.57656445851882,0,10.1056484302251,4.16029747645464,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,8.44030255766841,2.61460037580088,8.19778527692868,0,0,0,0.479249710983165,0,7.13184525203592,0.289562613335158,2.05476322550383,0.179060963239896,0,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0.813795071099207,0.415941723061614,0.535286966391485,0.157702415033935,0.702848489956279,3.61135319673263,6.82222512167955,4.1389228517002,7.97070718242524,8.84972009000175,1.65078867489357,0,0,0,0,0,0,0,0,9.17998888929474,10.2819522103002,4.2099014164961,3.58789617915963,2.55853624533352,7.88184213603677,2.96836132889982,3.54682295746108,5.85953693533319,4.68124789278712,5.19254429183621,4.88083589531829,0.483437798366489,0.40101294060657,0.0920809889358963,2.06666006696292,1.45672934405374,0.393373244878272,0.902399225814824,0.847168708148562,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0.769350375349168,0,0,0,0,0.082509499920588,0,0,6.42735719376638,0.676695028044854,0.308097234229289,0.307007349452259,0.137836572484531,0,0.145016693914229,0.170453254832202,0.445160178233687,0,0,0,0,6.507837690162,86.573395378426,20.911118104818,1.54016790088044,4.7907542728532,26.0979897622522,20.2003398823273,3.00562262158182,0.372158369359667,1.2655176988749,0.571890581771475,0.767693373934002,0.855877976067841,17.8193818838525,3.13979456079692,0.719489830333259,0.274537029736055,1.64937363283961,6.06547444719948,4.75530963519025,4.21258456238981,0,17.3036577638212,16.9040234810809,2.18399858252777,1.1312434556297,13.5609739944291,9.92457618383023,5.97095077717098,8.33056681982149,0.578775534266688,0.655894752046633,17.4502924187925,10.5339989353915,16.6200405494022,7.88762437122283,3.14396931241988,18.546894677025,3.90237170477658,2.32218398827431,0.329294892959902,0,0.699869440489966,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,1.78093928036649,0,0,0,0,0.755798243562828,3.47713520507326,0,6.84287092855976,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.569710279235006,0,0,0,0,2.1983422416447,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,2.46675464364152,3.7755776223568,0.126621591911757,0,0.480952921509202,0,0,0,0,0.343189995723929,0,1.36677789121976,0,0.815425236441684,0.941425616810999,0,1.15580235960608,0,0,0,1.28929632425987,0,0,0,0,0,0,0,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| |||
|short_description=p6@TMEM200A | |||
}} |
Revision as of 13:52, 22 January 2014
Short description: | p6@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_AK315824_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | A8K2A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.10e-34 | 32 |
smooth muscle cell | 9.60e-30 | 43 |
smooth muscle myoblast | 9.60e-30 | 43 |
muscle cell | 2.77e-22 | 55 |
muscle precursor cell | 8.38e-22 | 58 |
myoblast | 8.38e-22 | 58 |
multi-potent skeletal muscle stem cell | 8.38e-22 | 58 |
electrically responsive cell | 6.25e-19 | 61 |
electrically active cell | 6.25e-19 | 61 |
multi fate stem cell | 1.02e-17 | 427 |
somatic stem cell | 1.30e-17 | 433 |
stem cell | 1.12e-16 | 441 |
fibroblast | 4.44e-15 | 76 |
preadipocyte | 8.73e-15 | 12 |
aortic smooth muscle cell | 3.28e-13 | 10 |
mesodermal cell | 1.37e-09 | 121 |
smooth muscle cell of the subclavian artery | 3.23e-08 | 5 |
smooth muscle cell of the umbilical artery | 3.15e-07 | 4 |
skin fibroblast | 3.66e-07 | 23 |
fibroblast of tunica adventitia of artery | 4.12e-07 | 4 |
fibroblast of the aortic adventitia | 4.12e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.37e-13 | 14 |