FFCP PHASE1:Hg19::chr6:116600616..116600638,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21144 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=308bp_to_uc003pwq.1_5end | |||
|description=CAGE_peak_4_at_DSE_5end | |||
|id=chr6:116600616..116600638,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.35e-18!140;CL:0002087!1.66e-17!119;CL:0002031!2.80e-17!124;CL:0000838!2.04e-14!52;CL:0000542!1.58e-13!53;CL:0000051!1.58e-13!53;CL:0000037!2.83e-12!172;CL:0000566!2.83e-12!172;CL:0000988!4.91e-11!182;CL:0000791!5.71e-11!18;CL:0000789!5.71e-11!18;CL:0002420!5.71e-11!18;CL:0002419!5.71e-11!18;CL:0000790!5.71e-11!18;CL:0002032!2.45e-10!165;CL:0000837!2.45e-10!165;CL:0000084!9.29e-10!25;CL:0000827!9.29e-10!25;CL:0002057!3.72e-09!42;CL:0000860!5.46e-09!45;CL:0000625!6.75e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.86e-15;18!CL:0000789;6.86e-15;18!CL:0002419;6.86e-15;18!CL:0000084;6.80e-11;25!CL:0000542;2.42e-10;53!CL:0000860;1.79e-09;33!CL:0002057;1.79e-09;33!CL:0000625;7.04e-09;11!CL:0000624;2.11e-07;6!CL:0002087;3.55e-07;104!CL:0000473;7.87e-07;39!CL:0000234;7.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.29e-21,136;CL:0002087,4.35e-21,115;CL:0002031,4.89e-19,120;CL:0000838,1.09e-16,52;CL:0000037,2.84e-16,168;CL:0000542,4.25e-16,53;CL:0000051,4.25e-16,53;CL:0000791,1.38e-15,18;CL:0000789,1.38e-15,18;CL:0002420,1.38e-15,18;CL:0002419,1.38e-15,18;CL:0000790,1.38e-15,18;CL:0000988,1.48e-14,177;CL:0002032,1.80e-13,161;CL:0000837,1.80e-13,161;CL:0000084,2.49e-11,25;CL:0000827,2.49e-11,25;CL:0000860,2.21e-10,42;CL:0002057,2.21e-10,42;CL:0000625,1.59e-09,11;CL:0000473,2.21e-09,48;CL:0000234,2.21e-09,48;CL:0000624,2.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.86e-15;18!CL:0000051;2.42e-10;53!CL:0002057;2.41e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@DSE | |||
}} |
Revision as of 13:32, 22 January 2014
Short description: | p4@DSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DSE_5end |
Coexpression cluster: | NA |
Association with transcript: | 308bp_to_uc003pwq.1_5end |
EntrezGene: | DSE |
HGNC: | 21144 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.29e-21 | 136 |
nongranular leukocyte | 4.35e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 4.89e-19 | 120 |
lymphoid lineage restricted progenitor cell | 1.09e-16 | 52 |
hematopoietic stem cell | 2.84e-16 | 168 |
lymphocyte | 4.25e-16 | 53 |
common lymphoid progenitor | 4.25e-16 | 53 |
mature alpha-beta T cell | 1.38e-15 | 18 |
alpha-beta T cell | 1.38e-15 | 18 |
immature T cell | 1.38e-15 | 18 |
mature T cell | 1.38e-15 | 18 |
immature alpha-beta T cell | 1.38e-15 | 18 |
hematopoietic cell | 1.48e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-13 | 161 |
T cell | 2.49e-11 | 25 |
pro-T cell | 2.49e-11 | 25 |
classical monocyte | 2.21e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-10 | 42 |
CD8-positive, alpha-beta T cell | 1.59e-09 | 11 |
defensive cell | 2.21e-09 | 48 |
phagocyte | 2.21e-09 | 48 |
CD4-positive, alpha-beta T cell | 2.14e-07 | 6 |