FFCP PHASE1:Hg19::chr6:116381918..116381977,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3955 | |||
|TSSclassifier=strong | |||
|UniProt=P42685 | |||
|association_with_transcript=0bp_to_ENST00000368626,NM_002031,uc003pwi.1_5end | |||
|coexpression_cluster_id=C4458 | |||
|description=CAGE_peak_1_at_FRK_5end | |||
|id=chr6:116381918..116381977,- | |||
|ontology_enrichment_celltype=CL:0000223!1.88e-19!59;CL:0000066!1.95e-19!254;CL:0002076!9.53e-14!43;CL:0002251!1.66e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.43e-10;42!CL:0002251;5.29e-10;20!CL:0000182;4.94e-09;12!CL:1000507;8.36e-07;10!CL:1000494;8.36e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.50e-21,58;CL:0000066,3.54e-17,253;CL:0002076,2.93e-12,42;CL:0002251,4.92e-10,20;CL:0000182,5.28e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.76e-14;31!UBERON:0001041;3.17e-13;30!UBERON:0009497;6.14e-12;13!CL:0000223;1.61e-10;58!UBERON:0006595;1.95e-10;86!UBERON:0004161;6.41e-10;11 | |||
|ontology_enrichment_disease=DOID:305!2.73e-21!106;DOID:0050687!2.22e-15!143;DOID:299!2.51e-12!25;DOID:1749!2.19e-08!14;DOID:162!1.24e-07!235;DOID:14566!1.91e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;8.88e-14;25!DOID:1749;1.77e-09;14!DOID:305;3.19e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.41e-24,106;DOID:0050687,1.80e-15,143;DOID:299,7.44e-14,25;DOID:1749,1.18e-09,14;DOID:7,4.71e-08,39;DOID:162,4.70e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.42e-23!169;UBERON:0000925!1.42e-23!169;UBERON:0006595!1.42e-23!169;UBERON:0001007!2.47e-23!155;UBERON:0001555!2.47e-23!155;UBERON:0007026!2.47e-23!155;UBERON:0004921!7.84e-23!129;UBERON:0004185!7.84e-23!129;UBERON:0000077!2.51e-18!130;UBERON:0000466!8.03e-15!126;UBERON:0005177!1.23e-13!107;UBERON:0005911!2.07e-13!82;UBERON:0003104!2.08e-13!238;UBERON:0009142!2.08e-13!238;UBERON:0001041!3.65e-13!98;UBERON:0000481!1.13e-12!347;UBERON:0009569!2.68e-12!113;UBERON:0000161!2.01e-11!35;UBERON:0000062!3.08e-11!511;UBERON:0003929!5.51e-11!54;UBERON:0002417!7.62e-11!61;UBERON:0000916!7.62e-11!61;UBERON:0005172!7.64e-11!55;UBERON:0005173!7.64e-11!55;UBERON:0001004!1.84e-10!72;UBERON:0000464!6.24e-10!104;UBERON:0001008!1.37e-09!45;UBERON:0003103!1.57e-09!69;UBERON:0002100!2.79e-09!216;UBERON:0006554!4.54e-09!44;UBERON:0001046!5.03e-09!19;UBERON:0002530!1.31e-08!59;UBERON:0009497!2.76e-08!25;UBERON:0000015!2.76e-08!25;UBERON:0002423!2.76e-08!25;UBERON:0006235!2.76e-08!25;UBERON:0004161!2.76e-08!25;UBERON:0004111!6.70e-08!241;UBERON:0003064!8.48e-08!37;UBERON:0005409!9.17e-08!35;UBERON:0002365!1.21e-07!31;UBERON:0002330!1.21e-07!31;UBERON:0002553!3.86e-07!70;UBERON:0009854!4.82e-07!23;UBERON:0009856!6.12e-07!26;UBERON:0007023!7.46e-07!115;UBERON:0000166!7.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.76e-13;25!UBERON:0004921;4.25e-13;33!UBERON:0005409;4.97e-13;22!UBERON:0000160;1.06e-11;17!UBERON:0001007;2.65e-10;81!UBERON:0005172;1.15e-08;52!UBERON:0005173;1.15e-08;52!UBERON:0001555;1.17e-08;54!UBERON:0003350;1.13e-07;8!UBERON:0002107;1.14e-07;19!UBERON:0006925;1.14e-07;19!UBERON:0000059;2.06e-07;11!UBERON:0002294;3.57e-07;7!UBERON:0001173;3.57e-07;7!UBERON:0000974;3.97e-07;6!UBERON:0000344;3.99e-07;20!UBERON:0000489;5.33e-07;29!UBERON:0005177;5.55e-07;99!UBERON:0004907;8.13e-07;5!UBERON:0004211;8.36e-07;10!UBERON:0009773;8.36e-07;10!UBERON:0001231;8.36e-07;10!UBERON:0004810;8.36e-07;10!UBERON:0006554;8.47e-07;30!UBERON:0001008;8.47e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.24e-26,160;UBERON:0000925,1.24e-26,160;UBERON:0006595,1.24e-26,160;UBERON:0001007,2.62e-26,145;UBERON:0001555,2.62e-26,145;UBERON:0007026,2.62e-26,145;UBERON:0004921,1.36e-25,118;UBERON:0005177,8.86e-19,101;UBERON:0005911,2.24e-16,82;UBERON:0005172,2.70e-14,54;UBERON:0005173,2.70e-14,54;UBERON:0003929,8.83e-14,54;UBERON:0009497,2.29e-13,25;UBERON:0000015,2.29e-13,25;UBERON:0002423,2.29e-13,25;UBERON:0006235,2.29e-13,25;UBERON:0004161,2.29e-13,25;UBERON:0005409,1.86e-12,25;UBERON:0001041,3.01e-12,87;UBERON:0002417,5.72e-12,60;UBERON:0000916,5.72e-12,60;UBERON:0009569,6.22e-12,112;UBERON:0000160,1.09e-11,17;UBERON:0009854,3.02e-11,23;UBERON:0000161,3.50e-11,36;UBERON:0001046,1.33e-10,19;UBERON:0009856,1.41e-10,26;UBERON:0008835,2.05e-10,22;UBERON:0003894,2.05e-10,22;UBERON:0002100,6.56e-10,199;UBERON:0007499,8.70e-10,25;UBERON:0001008,1.22e-09,48;UBERON:0011216,1.53e-09,223;UBERON:0006554,6.29e-09,47;UBERON:0000489,1.94e-08,31;UBERON:0003350,1.13e-07,8;UBERON:0002107,1.16e-07,19;UBERON:0006925,1.16e-07,19;UBERON:0008836,1.16e-07,19;UBERON:0000059,2.09e-07,11;UBERON:0003104,2.12e-07,160;UBERON:0009142,2.12e-07,160;UBERON:0000344,3.40e-07,20;UBERON:0004111,3.99e-07,240;UBERON:0002113,4.38e-07,26;UBERON:0003918,4.38e-07,26;UBERON:0011143,4.38e-07,26;UBERON:0005095,4.38e-07,26;UBERON:0007687,4.38e-07,26;UBERON:0001004,6.65e-07,74;UBERON:0004907,8.34e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,1.5905718941022,0,0,0,0,5.17367348215965,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.794455084879313,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,1.73934767846967,4.36393792945335,2.29443676311203,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0.236613600079688,0,0,0.55146986366197,0,0.474541238222193,0.674156540800822,0.588664395376038,0,0,0,0,0,29.1536580090211,13.7595810334868,8.86184860022106,0,5.53447973444011,0,2.19500570817251,1.1240175325762,0.301586917234893,0.833296006426766,0,0,0,0,0,0.433099343283221,0,0,0.790204397959275,2.57545848628462,0,0,0,0.93733833986777,4.70349958956807,2.55195175036296,0.358234090811393,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,1.80863626235752,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.384417447767103,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,5.80125358039787,2.6065841139427,0.0920809889358963,1.60740227430449,0.182091168006717,0.131124414959424,1.35359883872224,3.15762882128101,3.92174884588428,1.46139224653261,6.01644284689391,0,0,0,0,0.270946437543853,1.00337954770971,2.03901018436031,0,2.0148727924996,0,0,0,0,0,14.5287826423288,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.356128142586949,2.64455864577565,1.53752053892085,4.97689578728878,1.11273558941105,0,0,0,0,0,0.869932992075073,0,0.572499546967965,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,2.82810863907426,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0,0.962221127255121,0.670302275535787,1.08890984861323,14.4040015188472,0.43050537267123,0,0,3.67557440331135,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70338495076131,0,0,0,0,0,0,0,0,0,0,14.2226810710247,0.439524537815682,0,0.557216921387392,0,0.95497793895076,0.890894042497916,0.614321404198464,0,0,0,0,0.211125408127993,7.57142355354065,2.48655523978033,17.1314268540908,0,2.95403533106567,0,1.3480252672099,10.3832281311853,0,3.25523238601881,0,0,0.969332746095218,0.185536196323703,0,4.94812746061943,0,0,7.85174793169948,1.01701460117107,2.6002644994473,0,0,0,0,0,0,0,0.295547618953547,0,0,4.1827123283581,3.46276163267087,0.113942055847001,0.46112780877612,0.179515288819544,0.108647371922008,1.5950057986596,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0.635746315921515,2.53197677433632,13.5483230772093,4.09923907158428,2.380275037163,6.96683351754953,15.5685313525877,14.0536933334734,0,0,0,0.067401132980677,0.802577647298789,0,0.91227394607833,2.15231080825299,0,9.07544126553598,9.67925728389311,0.30607276163049,2.0851571277401,0.300646838828985,0.311064574191741,0,0,0,0,9.96133411104275,0,1.04135843001079,6.46749822934892,1.48000651186684,5.76598005198699,0,2.03188295707079,2.11959019549938,2.54557916864949,3.87956065953678,0,1.12990370390266,0,0,0.0633107959558787,9.19091498853574,2.00397050628834,7.04394882639863,0.999048047910651,3.45817001169854,0,0.514784993585894,0.432164393964449,0.124252535565433,3.06402245001834,0,0,0,0,0,0.273810757783986,0,0.859530882839914,0,2.23425921017803,3.66656678418694,0,2.39614800598789,0.429226048136571,0.223171457441873,0.604651252380536,0,3.49487848582361,7.16926958995735,6.34602109534982,7.34698628010615,18.5043665247728,0,0,0,0,0,0,0,0,0.121499113316049,1.0063040627978,21.1987352634843,8.96973457108468,0.105600336519406,1.43429871466276,0.383830394638891,0.714695326373367,0.662091970365432,0,0,0.864221491201268,0,0,0,0.170388021785422,0.113312091520126,15.6810890035548,7.95041333473328,0,0,8.04108138056348,4.9337051562167,3.52398461473392,3.30129040709298,4.14239055347196,0,1.7785046870815,2.31405936923702,6.38341257770182,1.08803560673895,0,0.306345576763462,0,0.785270481251171,0,0,0,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0.303298235083296,0,0,0,0,0.298509605773748,0,0,0.757612021100357,0.7547037052577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| |||
|short_description=p1@FRK | |||
}} |
Revision as of 13:31, 22 January 2014
Short description: | p1@FRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FRK_5end |
Coexpression cluster: | C4458_small_renal_kidney_Hepatocyte_clear_colon_argyrophil |
Association with transcript: | 0bp_to_ENST00000368626, NM_002031, uc003pwi.1_5end |
EntrezGene: | FRK |
HGNC: | 3955 |
UniProt: | P42685 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.50e-21 | 58 |
epithelial cell | 3.54e-17 | 253 |
endo-epithelial cell | 2.93e-12 | 42 |
epithelial cell of alimentary canal | 4.92e-10 | 20 |
hepatocyte | 5.28e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.41e-24 | 106 |
cell type cancer | 1.80e-15 | 143 |
adenocarcinoma | 7.44e-14 | 25 |
squamous cell carcinoma | 1.18e-09 | 14 |
disease of anatomical entity | 4.71e-08 | 39 |
cancer | 4.70e-07 | 235 |