FFCP PHASE1:Hg19::chr6:75833794..75833805,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=74bp_to_AK022029_5end | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_1_at_AK022029_5end | |||
|id=chr6:75833794..75833805,- | |||
|ontology_enrichment_celltype=CL:0000057!4.86e-11!75;CL:0002620!1.18e-08!23;CL:0000055!3.12e-08!180;CL:0000499!5.68e-08!27;CL:0002334!1.28e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.18e-24;12!CL:0002580;1.01e-19;3!CL:0002579;2.21e-19;3!CL:0002615;4.23e-19;3!CL:0000136;8.92e-17;13!CL:0002617;8.84e-14;2!CL:0000153;3.48e-11;9!CL:0000447;3.48e-11;9!CL:0000138;5.70e-10;6!CL:0000135;3.38e-09;3!CL:0000388;3.38e-09;3!CL:0002616;1.47e-07;1!CL:0000499;2.08e-07;28!CL:0002581;3.00e-07;1!CL:0000327;9.57e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.61e-25,12;CL:0002580,1.02e-19,3;CL:0002579,1.31e-19,3;CL:0000136,2.05e-19,15;CL:0002615,3.12e-19,3;CL:0002617,7.57e-14,2;CL:0000057,5.49e-13,76;CL:0000153,2.82e-11,9;CL:0000447,2.82e-11,9;CL:0000058,4.90e-10,6;CL:0000138,4.90e-10,6;CL:0000135,2.99e-09,3;CL:0000388,2.99e-09,3;CL:0002616,1.33e-07,1;CL:0000499,1.83e-07,28;CL:0002581,2.35e-07,1;CL:0000134,2.46e-07,354;CL:0002320,4.34e-07,361;CL:0000327,8.47e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.47e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,4.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.29e-10!6;UBERON:0002358!5.29e-10!6;UBERON:0003684!5.29e-10!6;UBERON:0001178!5.29e-10!6;UBERON:0003102!3.02e-08!95;UBERON:0004457!1.39e-07!12;UBERON:0000042!1.39e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.11e-36;6!UBERON:0002358;1.11e-36;6!UBERON:0003684;1.11e-36;6!UBERON:0001178;1.11e-36;6!UBERON:0004457;1.16e-32;9!UBERON:0000042;1.16e-32;9!UBERON:0000310;9.01e-16;10!UBERON:0001443;2.56e-14;11!UBERON:0005406;3.94e-13;2!UBERON:0007846;3.38e-09;3!UBERON:0000043;3.38e-09;3!UBERON:0007845;3.38e-09;3!UBERON:0001282;3.00e-07;1!UBERON:0009842;3.00e-07;1!UBERON:0003704;3.00e-07;1!UBERON:0001171;3.00e-07;1!UBERON:0001172;3.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.85e-37,6;UBERON:0002358,4.85e-37,6;UBERON:0003684,4.85e-37,6;UBERON:0001178,4.85e-37,6;UBERON:0004457,1.49e-24,12;UBERON:0000042,1.49e-24,12;UBERON:0000310,8.36e-16,10;UBERON:0001443,2.39e-14,11;UBERON:0005406,2.81e-13,2;UBERON:0007846,2.99e-09,3;UBERON:0000043,2.99e-09,3;UBERON:0007845,2.99e-09,3;UBERON:0001282,4.61e-07,1;UBERON:0009842,4.61e-07,1;UBERON:0003704,4.61e-07,1;UBERON:0001171,4.61e-07,1;UBERON:0001172,4.61e-07,1;UBERON:0002384,9.38e-07,371 | |||
|phase1_expression=2.90685406832891,11.9896293378951,2.39622486963151,3.00219895059391,1.78784437770915,2.61701557230111,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,4.34539556882471,0,4.37971383272372,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0.600952235626387,0.113432183160021,1.07633781413317,2.56268866582281,0.847727604638247,0,0.721367704669072,1.03056216018252,1.48893485065272,0.506328996723799,0.0974370051611986,0.504867548488229,0.828449087780694,0.161646056818812,0.710019185033229,0.604512589365842,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.207970861530807,1.24900292158013,0.630809660135739,0.35142424497814,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,3.52962538562544,8.70046292742528,1.53766979106841,3.58195074346692,7.56013429374955,1.48418066444991,0,0,0,0.519254429183621,0,0,0.40101294060657,0,0.229628896329213,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.706874414074119,0,0,0,0,0.243713489631284,0,0.272999822815972,1.1312434556297,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.20453736500431,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.307801034015188,1.02547850262301,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,1.04349012362347,0.150257608997218,0,0,0.363697318405119,0.214821114084977,0,0.796191777397232,0,1.03018711554838,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,4.83593523616777,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | |||
|short_description=p1@AK022029 | |||
}} |
Revision as of 12:42, 22 January 2014
Short description: | p1@AK022029 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_AK022029_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 74bp_to_AK022029_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.61e-25 | 12 |
preadipocyte of the breast | 1.02e-19 | 3 |
omentum preadipocyte | 1.31e-19 | 3 |
fat cell | 2.05e-19 | 15 |
adipocyte of omentum tissue | 3.12e-19 | 3 |
adipocyte of breast | 7.57e-14 | 2 |
fibroblast | 5.49e-13 | 76 |
GAG secreting cell | 2.82e-11 | 9 |
carbohydrate secreting cell | 2.82e-11 | 9 |
chondroblast | 4.90e-10 | 6 |
chondrocyte | 4.90e-10 | 6 |
fibrocyte | 2.99e-09 | 3 |
tendon cell | 2.99e-09 | 3 |
perirenal adipocyte cell | 1.33e-07 | 1 |
stromal cell | 1.83e-07 | 28 |
perirenal preadipocyte | 2.35e-07 | 1 |
mesenchymal cell | 2.46e-07 | 354 |
connective tissue cell | 4.34e-07 | 361 |
extracellular matrix secreting cell | 8.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.85e-37 | 6 |
peritoneum | 4.85e-37 | 6 |
abdominal cavity | 4.85e-37 | 6 |
visceral peritoneum | 4.85e-37 | 6 |
cavity lining | 1.49e-24 | 12 |
serous membrane | 1.49e-24 | 12 |
breast | 8.36e-16 | 10 |
chest | 2.39e-14 | 11 |
perirenal fat | 2.81e-13 | 2 |
dense regular connective tissue | 2.99e-09 | 3 |
tendon | 2.99e-09 | 3 |
regular connective tissue | 2.99e-09 | 3 |
intralobular bile duct | 4.61e-07 | 1 |
acinus | 4.61e-07 | 1 |
intrahepatic bile duct | 4.61e-07 | 1 |
portal lobule | 4.61e-07 | 1 |
hepatic acinus | 4.61e-07 | 1 |
connective tissue | 9.38e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 4.90e-07 | 1 |