FFCP PHASE1:Hg19::chr6:64345971..64346036,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8921 | |||
|TSSclassifier=strong | |||
|UniProt=D6REP0 | |||
|association_with_transcript=0bp_to_ENST00000509876_5end | |||
|description=CAGE_peak_1_at_PHF3_5end | |||
|id=chr6:64345971..64346036,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.03e-07!18;CL:0000789!2.03e-07!18;CL:0002420!2.03e-07!18;CL:0002419!2.03e-07!18;CL:0000790!2.03e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.08e-07;18!CL:0000789;2.08e-07;18!CL:0002419;2.08e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.03e-07,18;CL:0000789,2.03e-07,18;CL:0002420,2.03e-07,18;CL:0002419,2.03e-07,18;CL:0000790,2.03e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.08e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-16!115;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0001017!7.83e-12!82;UBERON:0001049!2.17e-11!57;UBERON:0005068!2.17e-11!57;UBERON:0006241!2.17e-11!57;UBERON:0007135!2.17e-11!57;UBERON:0005743!3.00e-11!86;UBERON:0002780!6.80e-10!41;UBERON:0001890!6.80e-10!41;UBERON:0006240!6.80e-10!41;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0003080!1.49e-09!42;UBERON:0002616!6.07e-09!59;UBERON:0000924!2.68e-08!173;UBERON:0006601!2.68e-08!173;UBERON:0002346!3.12e-08!90;UBERON:0002020!1.18e-07!34;UBERON:0003528!1.18e-07!34;UBERON:0004121!1.83e-07!169;UBERON:0003075!3.05e-07!86;UBERON:0007284!3.05e-07!86;UBERON:0002791!6.63e-07!33;UBERON:0000153!6.64e-07!129;UBERON:0007811!6.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.51e-07;41!UBERON:0001890;1.51e-07;41!UBERON:0000073;7.27e-07;53!UBERON:0002616;7.27e-07;53!UBERON:0003528;9.64e-07;34!UBERON:0002020;9.64e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.96e-16,114;UBERON:0001016,1.99e-13,89;UBERON:0001017,4.48e-12,81;UBERON:0001049,1.05e-11,56;UBERON:0005068,1.05e-11,56;UBERON:0006241,1.05e-11,56;UBERON:0007135,1.05e-11,56;UBERON:0000073,1.27e-10,53;UBERON:0002616,1.27e-10,53;UBERON:0002780,6.80e-10,41;UBERON:0001890,6.80e-10,41;UBERON:0003080,6.80e-10,41;UBERON:0006240,6.80e-10,41;UBERON:0000955,8.59e-10,68;UBERON:0006238,8.59e-10,68;UBERON:0002346,2.55e-08,86;UBERON:0004121,3.81e-08,171;UBERON:0000924,3.81e-08,171;UBERON:0006601,3.81e-08,171;UBERON:0003528,1.18e-07,34;UBERON:0002020,1.18e-07,34;UBERON:0003075,2.59e-07,82;UBERON:0007284,2.59e-07,82;UBERON:0002791,4.46e-07,32 | |||
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| |||
|short_description=p1@PHF3 | |||
}} |
Revision as of 12:30, 22 January 2014
Short description: | p1@PHF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000509876_5end |
EntrezGene: | PHF3 |
HGNC: | 8921 |
UniProt: | D6REP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.03e-07 | 18 |
alpha-beta T cell | 2.03e-07 | 18 |
immature T cell | 2.03e-07 | 18 |
mature T cell | 2.03e-07 | 18 |
immature alpha-beta T cell | 2.03e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.96e-16 | 114 |
nervous system | 1.99e-13 | 89 |
central nervous system | 4.48e-12 | 81 |
neural tube | 1.05e-11 | 56 |
neural rod | 1.05e-11 | 56 |
future spinal cord | 1.05e-11 | 56 |
neural keel | 1.05e-11 | 56 |
regional part of nervous system | 1.27e-10 | 53 |
regional part of brain | 1.27e-10 | 53 |
regional part of forebrain | 6.80e-10 | 41 |
forebrain | 6.80e-10 | 41 |
anterior neural tube | 6.80e-10 | 41 |
future forebrain | 6.80e-10 | 41 |
brain | 8.59e-10 | 68 |
future brain | 8.59e-10 | 68 |
neurectoderm | 2.55e-08 | 86 |
ectoderm-derived structure | 3.81e-08 | 171 |
ectoderm | 3.81e-08 | 171 |
presumptive ectoderm | 3.81e-08 | 171 |
brain grey matter | 1.18e-07 | 34 |
gray matter | 1.18e-07 | 34 |
neural plate | 2.59e-07 | 82 |
presumptive neural plate | 2.59e-07 | 82 |
regional part of telencephalon | 4.46e-07 | 32 |