FFCP PHASE1:Hg19::chr6:56504302..56504318,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C956 | |||
|description=CAGE_peak_at_chr6:56504302..56504318,- | |||
|id=chr6:56504302..56504318,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.84e-12!82;UBERON:0004121!2.33e-11!169;UBERON:0000033!4.13e-11!123;UBERON:0000153!4.76e-11!129;UBERON:0007811!4.76e-11!129;UBERON:0001049!8.52e-11!57;UBERON:0005068!8.52e-11!57;UBERON:0006241!8.52e-11!57;UBERON:0007135!8.52e-11!57;UBERON:0000924!9.25e-11!173;UBERON:0006601!9.25e-11!173;UBERON:0000955!1.27e-10!69;UBERON:0006238!1.27e-10!69;UBERON:0000475!1.91e-10!365;UBERON:0005743!2.53e-10!86;UBERON:0002616!4.04e-09!59;UBERON:0000073!7.70e-09!94;UBERON:0001016!7.70e-09!94;UBERON:0000062!1.99e-08!511;UBERON:0003080!2.33e-08!42;UBERON:0000468!2.63e-08!659;UBERON:0002780!2.82e-08!41;UBERON:0001890!2.82e-08!41;UBERON:0006240!2.82e-08!41;UBERON:0002020!1.01e-07!34;UBERON:0003528!1.01e-07!34;UBERON:0000481!2.37e-07!347;UBERON:0003102!5.23e-07!95;UBERON:0002791!5.83e-07!33;UBERON:0000467!9.01e-07!625;UBERON:0001893!9.60e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.06e-10,56;UBERON:0005068,2.06e-10,56;UBERON:0006241,2.06e-10,56;UBERON:0007135,2.06e-10,56;UBERON:0000073,1.13e-09,53;UBERON:0002616,1.13e-09,53;UBERON:0001017,3.30e-08,81;UBERON:0004121,5.12e-08,171;UBERON:0000924,5.12e-08,171;UBERON:0006601,5.12e-08,171;UBERON:0000955,8.30e-08,68;UBERON:0006238,8.30e-08,68;UBERON:0010371,1.34e-07,104;UBERON:0003102,1.65e-07,99;UBERON:0002780,4.09e-07,41;UBERON:0001890,4.09e-07,41;UBERON:0003080,4.09e-07,41;UBERON:0006240,4.09e-07,41;UBERON:0001016,9.97e-07,89 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0,2.00146596706261,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0.618831764800233,1.32558950291166,2.6893005858071,0.602694528023977,0,2.43966399395253,0,0,0.313454721478088,0.286235987131057,1.09499540058307,0.753255837568817,1.37544130346312,0.821005894499457,0.393553906568396,0,0,0.154816123316076,2.75826367343678,0,3.32778609150109,0,0.284338464974843,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0,1.88300474649071,0,0,0.567208902984407,0.221729397462564,0.790513071238134,0,0,0.741568885568859,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,1.10047216776027,0.208994966536811,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,1.62028389576352,0.535798369704479,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,2.38336525463794,1.72101972449288,0.354668382198357,0.560677600142307,0,1.2333377420858,0,0.67355336034844,0.980771418680752,0,0,0.234321431833797,0,0,1.34503812496621,0.939475989150119,0.647491777472526,0.842704840213491,0.816616685019573,1.35117749042945,0.619954687054593,0,1.23633464639278,0,0,0.841680569770331,0.875829639103749,0,0.877955241761676,2.14541457059314,0.45071417671979,0.226864366320042,7.71375433462106,1.49490172172997,1.27159140695737,6.30191301777245,1.95799805553034,6.69865404118636,0.558350568994769,3.88185564154912,1.46155507741798,3.28163906517349,0.736399189138395,0.80823028409406,6.39017266529906,2.11579406278045,0.339121184620975,2.31913023795956,3.54569956768085,1.72082757233402,0.121973706129595,0.265059536642971,0.464775771478074,0.310983165046111,0.504641701751257,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.337169380156203,1.68707720918437,0.55146986366197,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,1.26755034821831,4.91413608338813,1.77236972004421,0,0.614942192715568,0.171567810298526,5.04851312879678,0,4.52380375852339,11.3883787544991,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.462985512576611,1.14152491340759,0,0,0,0.234004265139238,0,1.87467667973554,2.18376766658517,3.1190521393325,3.31366534000539,4.35950907770943,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0.22001485746285,0.646358578788889,0,0,1.06375246633948,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0,0,0.355391948742546,0.791951872933429,0.904318131178758,0,1.19967589418468,0,0,0,2.15662369942424,1.14861935834114,0,0.579125226670317,2.26023954805422,0.716243852959582,0,0,0,0,1.27047312111232,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.858840442033979,1.00034104211935,0.271265023699736,1.87173775377726,5.17444067511769,2.52323864054295,1.52283839490527,0,0,1.03473071292505,1.32845119707087,0.368738337083406,2.17209036170207,0.195801157462741,0,0.413536052245775,0,0,0,0,0.30239029332968,1.24053903909388,1.53461973288062,1.12264037773229,0.256278298511402,1.53512174720011,1.28683136914886,1.48418066444991,1.3878872442239,0.710246901252508,0.410635780069046,2.59627214591811,1.04589340613963,0.120859449591622,7.01772646061497,18.8766027318587,0,4.37018803216121,2.36023946926963,0,0.462092022626489,0,0,0.211103257785751,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,1.83138929636687,0.577566499444116,0,1.30012049207304,3.21367859688319,0.290012154876366,0.308097234229289,0.614014698904518,0.413509717453592,1.18162269355101,0.580066775656914,0.681813019328807,1.06838442776085,6.61139661443912,8.26417289669956,4.33883222481586,6.4740979747552,0,2.83331112147576,0,0.308033580176089,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0.953150969619124,0,2.1396949401696,0,0,0.539617372749944,1.37268514868027,1.17812402345686,0,0,0,0,1.46228093778771,0,0.272999822815972,2.12108147930569,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0.717056761020258,0.196498082026242,0,1.06428319221179,1.47775344708365,1.31717957183961,0,0,0.48111056362756,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0.443430153536676,5.05391480455311,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0.478278818186467,0.59873811429845,0,0,0,0.842391534340376,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.879049075631364,0.121360521749513,0,0.852408440419239,3.81991175580304,0.593929361665277,6.45037474408387,0.994147647766298,5.48610724001,1.22439575525196,0.16480387422676,0,0.398495976502139,0.276283915531148,1.0077309914171,1.43176155503017,1.1077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| |||
|short_description=p@chr6:56504302..56504318,- | |||
}} |
Revision as of 12:24, 22 January 2014
Short description: | p@chr6:56504302..56504318, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr6:56504302..56504318, - |
Coexpression cluster: | C956_salivary_Prostate_oral_thalamus_olfactory_Fibroblast_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.06e-10 | 56 |
neural rod | 2.06e-10 | 56 |
future spinal cord | 2.06e-10 | 56 |
neural keel | 2.06e-10 | 56 |
regional part of nervous system | 1.13e-09 | 53 |
regional part of brain | 1.13e-09 | 53 |
central nervous system | 3.30e-08 | 81 |
ectoderm-derived structure | 5.12e-08 | 171 |
ectoderm | 5.12e-08 | 171 |
presumptive ectoderm | 5.12e-08 | 171 |
brain | 8.30e-08 | 68 |
future brain | 8.30e-08 | 68 |
ecto-epithelium | 1.34e-07 | 104 |
surface structure | 1.65e-07 | 99 |
regional part of forebrain | 4.09e-07 | 41 |
forebrain | 4.09e-07 | 41 |
anterior neural tube | 4.09e-07 | 41 |
future forebrain | 4.09e-07 | 41 |
nervous system | 9.97e-07 | 89 |