FFCP PHASE1:Hg19::chr6:41196079..41196088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30807 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXN2 | |||
|association_with_transcript=2bp_to_ENST00000448827_5end | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_2_at_TREML4_5end | |||
|id=chr6:41196079..41196088,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.25e-19!63;CL:0000576!5.25e-19!63;CL:0000040!5.25e-19!63;CL:0000559!5.25e-19!63;CL:0002009!2.46e-18!65;CL:0000766!1.32e-17!76;CL:0000839!7.98e-17!70;CL:0000557!1.51e-16!71;CL:0000763!3.64e-14!112;CL:0000049!3.64e-14!112;CL:0002057!2.07e-13!42;CL:0000860!2.15e-12!45;CL:0000738!1.22e-10!140;CL:0002087!4.53e-10!119;CL:0002619!3.67e-09!3;CL:0000037!4.43e-09!172;CL:0000566!4.43e-09!172;CL:0002032!1.89e-08!165;CL:0000837!1.89e-08!165;CL:0000988!2.27e-08!182;CL:0002031!3.14e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.97e-36;39!CL:0000234;5.97e-36;39!CL:0000860;5.41e-31;33!CL:0002057;5.41e-31;33!CL:0000576;4.56e-22;48!CL:0000766;2.33e-14;69!CL:0000763;3.18e-14;100!CL:0002087;2.69e-09;104!CL:0000235;4.37e-09;6!CL:0000738;2.13e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.03e-36,48;CL:0000234,7.03e-36,48;CL:0002194,2.04e-33,59;CL:0000576,2.04e-33,59;CL:0000040,2.04e-33,59;CL:0000559,2.04e-33,59;CL:0002009,2.71e-32,61;CL:0000766,8.85e-32,72;CL:0000839,8.91e-30,66;CL:0000557,2.57e-29,67;CL:0000860,1.22e-28,42;CL:0002057,1.22e-28,42;CL:0000763,9.14e-21,108;CL:0000049,9.14e-21,108;CL:0002087,2.39e-19,115;CL:0000738,9.44e-19,136;CL:0002031,8.34e-16,120;CL:0000037,7.13e-15,168;CL:0000988,4.95e-14,177;CL:0002032,2.01e-13,161;CL:0000837,2.01e-13,161;CL:0000235,4.37e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.28e-24;42!CL:0000049;1.32e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.26e-20!102;UBERON:0003061!6.26e-20!102;UBERON:0002193!8.54e-18!112;UBERON:0002405!2.50e-15!115;UBERON:0002371!2.31e-14!80;UBERON:0004177!9.59e-14!7;UBERON:0001474!3.71e-13!86;UBERON:0004765!9.06e-11!101;UBERON:0001434!9.06e-11!101;UBERON:0002106!4.50e-09!3;UBERON:0004854!4.50e-09!3;UBERON:0009034!4.50e-09!3;UBERON:0002095!4.50e-09!3;UBERON:0004782!4.50e-09!3;UBERON:0003281!4.50e-09!3;UBERON:0009664!4.50e-09!3;UBERON:0002296!4.50e-09!3;UBERON:0005602!4.50e-09!3;UBERON:0001179!4.50e-09!3;UBERON:0006293!4.50e-09!3;UBERON:0002204!3.00e-08!167;UBERON:0003081!3.01e-08!216;UBERON:0002171!1.95e-07!1;UBERON:0006518!1.95e-07!1;UBERON:0008949!1.95e-07!1;UBERON:0000101!1.95e-07!1;UBERON:0002167!1.95e-07!1;UBERON:0002363!2.50e-07!1;UBERON:0007647!2.50e-07!1;UBERON:0010115!2.50e-07!1;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-26,98;UBERON:0003061,1.82e-26,98;UBERON:0002371,1.02e-25,76;UBERON:0002405,3.21e-24,93;UBERON:0002193,6.86e-24,108;UBERON:0001474,9.43e-24,82;UBERON:0004765,1.57e-21,90;UBERON:0001434,3.02e-19,100;UBERON:0003081,5.88e-12,203;UBERON:0002204,6.35e-11,167;UBERON:0000926,4.86e-07,315;UBERON:0004120,4.86e-07,315;UBERON:0006603,4.86e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,2.31818010870768,11.1956643860265,0,0,27.1941973179651,0,0,68.1830969803497,0,0,32.0613483085055,0,0,16.9418105588344,0,0,32.1388086989448,0,0,29.026914416431,0,0,83.5802607250322,0,0,37.4360511232547,0,0,64.7777467817705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,0,2.82399208348584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.639856146899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TREML4 | |||
}} |
Revision as of 11:51, 22 January 2014
Short description: | p2@TREML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TREML4_5end |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | 2bp_to_ENST00000448827_5end |
EntrezGene: | TREML4 |
HGNC: | 30807 |
UniProt: | Q6UXN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.03e-36 | 48 |
phagocyte | 7.03e-36 | 48 |
monopoietic cell | 2.04e-33 | 59 |
monocyte | 2.04e-33 | 59 |
monoblast | 2.04e-33 | 59 |
promonocyte | 2.04e-33 | 59 |
macrophage dendritic cell progenitor | 2.71e-32 | 61 |
myeloid leukocyte | 8.85e-32 | 72 |
myeloid lineage restricted progenitor cell | 8.91e-30 | 66 |
granulocyte monocyte progenitor cell | 2.57e-29 | 67 |
classical monocyte | 1.22e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-28 | 42 |
myeloid cell | 9.14e-21 | 108 |
common myeloid progenitor | 9.14e-21 | 108 |
nongranular leukocyte | 2.39e-19 | 115 |
leukocyte | 9.44e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 8.34e-16 | 120 |
hematopoietic stem cell | 7.13e-15 | 168 |
hematopoietic cell | 4.95e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.01e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-13 | 161 |
macrophage | 4.37e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-26 | 98 |
blood island | 1.82e-26 | 98 |
bone marrow | 1.02e-25 | 76 |
immune system | 3.21e-24 | 93 |
hemolymphoid system | 6.86e-24 | 108 |
bone element | 9.43e-24 | 82 |
skeletal element | 1.57e-21 | 90 |
skeletal system | 3.02e-19 | 100 |
lateral plate mesoderm | 5.88e-12 | 203 |
musculoskeletal system | 6.35e-11 | 167 |
mesoderm | 4.86e-07 | 315 |
mesoderm-derived structure | 4.86e-07 | 315 |
presumptive mesoderm | 4.86e-07 | 315 |