FFCP PHASE1:Hg19::chr6:41040849..41040860,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7804 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-100bp_to_uc003opq.2_5end | |||
|description=CAGE_peak_3_at_NFYA_5end | |||
|id=chr6:41040849..41040860,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.31e-12!45;CL:0002057!6.76e-12!42;CL:0002031!6.48e-09!124;CL:0000738!1.48e-08!140;CL:0002087!9.62e-08!119;CL:0000557!8.57e-07!71;CL:0002393!8.96e-07!9;CL:0002397!8.96e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.93e-10;3!CL:0002396;1.93e-10;3!CL:0000576;6.35e-10;48!CL:0000860;8.79e-08;33!CL:0002057;8.79e-08;33!CL:0000766;1.26e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.54e-16,42;CL:0002057,3.54e-16,42;CL:0000473,1.14e-13,48;CL:0000234,1.14e-13,48;CL:0002393,6.01e-13,9;CL:0002397,6.01e-13,9;CL:0000766,6.54e-13,72;CL:0000839,6.58e-13,66;CL:0000557,1.19e-12,67;CL:0000875,2.25e-10,3;CL:0002396,2.25e-10,3;CL:0002194,3.50e-10,59;CL:0000576,3.50e-10,59;CL:0000040,3.50e-10,59;CL:0000559,3.50e-10,59;CL:0002009,9.79e-10,61;CL:0000763,4.82e-08,108;CL:0000049,4.82e-08,108;CL:0002031,1.31e-07,120;CL:0000738,6.33e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.27e-07!94;UBERON:0001016!1.27e-07!94;UBERON:0005743!6.74e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.02e-12,76;UBERON:0001474,9.75e-11,82;UBERON:0002405,4.42e-10,93;UBERON:0004765,2.21e-09,90;UBERON:0002390,2.52e-09,98;UBERON:0003061,2.52e-09,98;UBERON:0002193,4.99e-08,108;UBERON:0001434,5.32e-08,100;UBERON:0005162,6.50e-08,2;UBERON:0000122,6.50e-08,2 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0.612002073732759,0.626909442956176,0.85870796139317,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.928896739896456,0,0.30120591877825,0,0.46480320348181,0.284338464974843,1.17440175733939,2.21598163412751,0.802177789880567,1.30206522429511,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0,0.619412741790207,1.1507695692886,0.256160706529101,1.18241114944293,0.689491361473237,0,0,0.752969358170419,0,0.449446968890169,1.53041946185451,2.24650318953266,1.27867425159808,0.329851300186716,0.997318288108159,0.426224750532694,1.16083695451434,0.56738522469114,1.24564449799115,1.50749199154046,0,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,1.69004229049553,0.637812899895131,0.838634582033504,2.02191536063691,0.600707571366025,0.64290234678832,1.99508920618874,1.19350006319454,1.0959849225878,0,0,0,0,0.800791974072025,0.574752439954483,0,0.954053754535364,1.1384259382189,0.587237189370939,0.764546456250458,2.64342657158052,0.560508562981536,0.526768169550154,0.983548850569165,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0.668462741311041,0,1.32920336750173,0,0.512365278902701,0.130059347559878,0.493313713811028,0.276350017785848,0,0.444859689486181,0.802622484269139,0,0.453237370790265,1.53288197440768,1.37450978193052,1.26509846009751,0,0.651083453856419,0.950452044448374,0.451725357233318,0,0,0,0.821127996921047,0.604820229674197,0.802320587350522,0.579297615531196,0,1.34140171940727,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,1.53316637465883,0,0.183201743930407,1.31780417436063,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.89694817844431,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0,0.769494313892781,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,1.71697232418975,0,0,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0.383382679165211,0.492663237895943,0.44024217006613,1.65862492432618,1.00883967391873,1.38866676769018,0.126995788584338,0.763976851116555,2.34434894420094,0,0,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0.646358578788889,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.788123040807709,1.2937654491571,0.77005821767849,0.76228387266739,0,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0,0.413536052245775,0.647142602455851,0.426910231213777,1.5156378572313,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0.895499018888713,0,0.261435451024901,0.256450125116389,0.984043937099117,0,0.309123034943167,0.183138929636687,0.247528499761764,0,0,0,0,0.462145851343933,0.15350367472613,0,0.214840489736547,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,1.06461206063404,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0.5745161103971,0.211673582723883,0,0,0.228234679033192,0.156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| |||
|short_description=p3@NFYA | |||
}} |
Revision as of 11:50, 22 January 2014
Short description: | p3@NFYA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFYA_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_uc003opq.2_5end |
EntrezGene: | NFYA |
HGNC: | 7804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.54e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-16 | 42 |
defensive cell | 1.14e-13 | 48 |
phagocyte | 1.14e-13 | 48 |
intermediate monocyte | 6.01e-13 | 9 |
CD14-positive, CD16-positive monocyte | 6.01e-13 | 9 |
myeloid leukocyte | 6.54e-13 | 72 |
myeloid lineage restricted progenitor cell | 6.58e-13 | 66 |
granulocyte monocyte progenitor cell | 1.19e-12 | 67 |
non-classical monocyte | 2.25e-10 | 3 |
CD14-low, CD16-positive monocyte | 2.25e-10 | 3 |
monopoietic cell | 3.50e-10 | 59 |
monocyte | 3.50e-10 | 59 |
monoblast | 3.50e-10 | 59 |
promonocyte | 3.50e-10 | 59 |
macrophage dendritic cell progenitor | 9.79e-10 | 61 |
myeloid cell | 4.82e-08 | 108 |
common myeloid progenitor | 4.82e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.31e-07 | 120 |
leukocyte | 6.33e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.02e-12 | 76 |
bone element | 9.75e-11 | 82 |
immune system | 4.42e-10 | 93 |
skeletal element | 2.21e-09 | 90 |
hematopoietic system | 2.52e-09 | 98 |
blood island | 2.52e-09 | 98 |
hemolymphoid system | 4.99e-08 | 108 |
skeletal system | 5.32e-08 | 100 |
multi cell component structure | 6.50e-08 | 2 |
neuron projection bundle | 6.50e-08 | 2 |