FFCP PHASE1:Hg19::chr6:32160622..32160719,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13945 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4H4,E9PIE9,E9PIP3 | |||
|association_with_transcript=0bp_to_ENST00000375040,ENST00000472768,ENST00000487761,uc003oax.3,uc003oay.3_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_GPSM3_5end | |||
|id=chr6:32160622..32160719,- | |||
|ontology_enrichment_celltype=CL:0000037!4.98e-64!172;CL:0000566!4.98e-64!172;CL:0000988!5.40e-64!182;CL:0002032!2.00e-59!165;CL:0000837!2.00e-59!165;CL:0000738!1.83e-53!140;CL:0002087!1.55e-42!119;CL:0002031!4.34e-42!124;CL:0000763!2.02e-30!112;CL:0000049!2.02e-30!112;CL:0000542!9.33e-27!53;CL:0000051!9.33e-27!53;CL:0000838!1.99e-26!52;CL:0000766!7.60e-21!76;CL:0000557!2.51e-17!71;CL:0000839!1.10e-15!70;CL:0002009!2.27e-15!65;CL:0002194!9.90e-15!63;CL:0000576!9.90e-15!63;CL:0000040!9.90e-15!63;CL:0000559!9.90e-15!63;CL:0000084!1.41e-14!25;CL:0000827!1.41e-14!25;CL:0002057!1.63e-14!42;CL:0000791!2.49e-12!18;CL:0000789!2.49e-12!18;CL:0002420!2.49e-12!18;CL:0002419!2.49e-12!18;CL:0000790!2.49e-12!18;CL:0000860!1.42e-11!45;CL:0000945!2.18e-11!24;CL:0000826!2.18e-11!24;CL:0000134!2.87e-10!358;CL:0002320!8.83e-10!365;CL:0000219!1.02e-08!390;CL:0000625!2.09e-08!11;CL:0000236!4.21e-08!14;CL:0000034!6.47e-08!444;CL:0000723!5.16e-07!436;CL:0000048!5.25e-07!430;CL:0000003!6.10e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.25e-16;53!CL:0000084;1.12e-14;25!CL:0002087;2.17e-13;104!CL:0000791;2.13e-12;18!CL:0000789;2.13e-12;18!CL:0002419;2.13e-12;18!CL:0000738;3.75e-12;136!CL:0000988;5.87e-12;177!CL:0000945;1.74e-11;24!CL:0000576;3.07e-11;48!CL:0000860;4.93e-11;33!CL:0002057;4.93e-11;33!CL:0000766;7.16e-11;69!CL:0000763;7.30e-11;100!CL:0000473;1.34e-10;39!CL:0000234;1.34e-10;39!CL:0000625;1.89e-08;11!CL:0000236;9.62e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.30e-68,168;CL:0000988,2.44e-68,177;CL:0002032,1.16e-63,161;CL:0000837,1.16e-63,161;CL:0000738,7.49e-58,136;CL:0002087,1.02e-46,115;CL:0002031,3.95e-46,120;CL:0000763,6.86e-34,108;CL:0000049,6.86e-34,108;CL:0000542,7.58e-27,53;CL:0000051,7.58e-27,53;CL:0000838,1.63e-26,52;CL:0000766,2.59e-24,72;CL:0000557,1.60e-20,67;CL:0000839,1.07e-18,66;CL:0002009,1.71e-18,61;CL:0002194,7.88e-18,59;CL:0000576,7.88e-18,59;CL:0000040,7.88e-18,59;CL:0000559,7.88e-18,59;CL:0000473,5.85e-16,48;CL:0000234,5.85e-16,48;CL:0000084,1.27e-14,25;CL:0000827,1.27e-14,25;CL:0000860,1.47e-14,42;CL:0002057,1.47e-14,42;CL:0000791,2.28e-12,18;CL:0000789,2.28e-12,18;CL:0002420,2.28e-12,18;CL:0002419,2.28e-12,18;CL:0000790,2.28e-12,18;CL:0000945,2.01e-11,24;CL:0000826,2.01e-11,24;CL:0000134,5.46e-11,354;CL:0002320,1.89e-10,361;CL:0000219,2.31e-09,386;CL:0000034,1.94e-08,441;CL:0000625,1.97e-08,11;CL:0000236,3.99e-08,14;CL:0000723,1.68e-07,433;CL:0000048,1.82e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;9.25e-16;53!CL:0000790;2.13e-12;18!CL:0002057;6.71e-11;42!CL:0000049;6.45e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!9.39e-16!51;DOID:0060083!9.39e-16!51;DOID:1240!2.89e-13!39;DOID:8692!1.92e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.88e-10;39!DOID:8692;4.21e-10;31!DOID:2531;5.64e-10;51!DOID:0060083;5.64e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.36e-16,51;DOID:0060083,8.36e-16,51;DOID:1240,2.63e-13,39;DOID:8692,1.78e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.93e-24!102;UBERON:0003061!9.93e-24!102;UBERON:0002193!1.55e-22!112;UBERON:0002371!5.65e-14!80;UBERON:0002405!2.34e-13!115;UBERON:0003081!6.22e-13!216;UBERON:0001474!2.13e-11!86;UBERON:0002384!2.61e-09!375;UBERON:0000178!1.39e-08!15;UBERON:0000179!1.39e-08!15;UBERON:0000463!1.39e-08!15;UBERON:0004765!1.42e-07!101;UBERON:0001434!1.42e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-08;15!UBERON:0000179;1.22e-08;15!UBERON:0000463;1.22e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.03e-27,98;UBERON:0003061,4.03e-27,98;UBERON:0002193,1.25e-25,108;UBERON:0002405,9.67e-19,93;UBERON:0002371,9.23e-17,76;UBERON:0003081,6.37e-14,203;UBERON:0001474,1.16e-13,82;UBERON:0004765,2.38e-11,90;UBERON:0002384,5.18e-10,371;UBERON:0000178,1.31e-08,15;UBERON:0000179,1.31e-08,15;UBERON:0000463,1.31e-08,15;UBERON:0001434,1.70e-08,100 | |||
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| |||
|short_description=p2@GPSM3 | |||
}} |
Revision as of 11:13, 22 January 2014
Short description: | p2@GPSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPSM3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000375040, ENST00000472768, ENST00000487761, uc003oax.3, uc003oay.3_5end |
EntrezGene: | GPSM3 |
HGNC: | 13945 |
UniProt: | Q9Y4H4E9PIE9E9PIP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.03e-27 | 98 |
blood island | 4.03e-27 | 98 |
hemolymphoid system | 1.25e-25 | 108 |
immune system | 9.67e-19 | 93 |
bone marrow | 9.23e-17 | 76 |
lateral plate mesoderm | 6.37e-14 | 203 |
bone element | 1.16e-13 | 82 |
skeletal element | 2.38e-11 | 90 |
connective tissue | 5.18e-10 | 371 |
blood | 1.31e-08 | 15 |
haemolymphatic fluid | 1.31e-08 | 15 |
organism substance | 1.31e-08 | 15 |
skeletal system | 1.70e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.36e-16 | 51 |
immune system cancer | 8.36e-16 | 51 |
leukemia | 2.63e-13 | 39 |
myeloid leukemia | 1.78e-10 | 31 |